PDB Short entry for 2UVE HEADER HYDROLASE 09-MAR-07 2UVE TITLE STRUCTURE OF YERSINIA ENTEROCOLITICA FAMILY 28 TITLE 2 EXOPOLYGALACTURONASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOPOLYGALACTURONASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: YEGH28; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTEROCOLITICA; SOURCE 3 ORGANISM_TAXID: 630; SOURCE 4 ATCC: 9610; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GH28, PECTIN, CELL WALL, HYDROLASE, PERIPLASM, YERSINIA KEYWDS 2 ENTEROCOLITICA, BETA-HELIX, GLYCOSIDASE, EXO-ACTIVITY EXPDTA X-RAY DIFFRACTION AUTHOR D.W.ABBOTT,A.B.BORASTON REVDAT 3 24-FEB-09 2UVE 1 VERSN REVDAT 2 05-JUN-07 2UVE 1 REMARK REVDAT 1 08-MAY-07 2UVE 0 JRNL AUTH D.W.ABBOTT,A.B.BORASTON JRNL TITL THE STRUCTURAL BASIS FOR EXOPOLYGALACTURONASE JRNL TITL 2 ACTIVITY IN A FAMILY 28 GLYCOSIDE HYDROLASE. JRNL REF J.MOL.BIOL. V. 368 1215 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17397864 JRNL DOI 10.1016/J.JMB.2007.02.083 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 64794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3457 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4461 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 272 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8838 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 463 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.490 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9104 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12374 ; 1.824 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1140 ; 9.736 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 434 ;38.675 ;25.207 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1489 ;15.752 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;17.672 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1348 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6973 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4186 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 6060 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 573 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.295 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.234 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5841 ; 1.072 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9134 ; 1.694 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3727 ; 2.826 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3240 ; 4.395 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 2UVE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAR-07. REMARK 100 THE PDBE ID CODE IS EBI-31850. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 113.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.485 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64794 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.38150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 LEU A 5 REMARK 465 GLN A 6 REMARK 465 ARG A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 THR A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 MET A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 ILE A 16 REMARK 465 MET A 17 REMARK 465 ALA A 18 REMARK 465 SER A 19 REMARK 465 LEU A 20 REMARK 465 MET A 21 REMARK 465 VAL A 22 REMARK 465 GLY A 23 REMARK 465 THR A 24 REMARK 465 PRO A 25 REMARK 465 MET A 26 REMARK 465 ALA A 27 REMARK 465 MET A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 LYS A 31 REMARK 465 SER A 32 REMARK 465 SER A 33 REMARK 465 SER A 34 REMARK 465 LEU A 35 REMARK 465 ALA A 607 REMARK 465 PRO A 608 REMARK 465 MET B 1 REMARK 465 GLN B 2 REMARK 465 ALA B 3 REMARK 465 GLN B 4 REMARK 465 LEU B 5 REMARK 465 GLN B 6 REMARK 465 ARG B 7 REMARK 465 PRO B 8 REMARK 465 ARG B 9 REMARK 465 THR B 10 REMARK 465 THR B 11 REMARK 465 GLY B 12 REMARK 465 MET B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 ILE B 16 REMARK 465 MET B 17 REMARK 465 ALA B 18 REMARK 465 SER B 19 REMARK 465 LEU B 20 REMARK 465 MET B 21 REMARK 465 VAL B 22 REMARK 465 GLY B 23 REMARK 465 THR B 24 REMARK 465 PRO B 25 REMARK 465 MET B 26 REMARK 465 ALA B 27 REMARK 465 MET B 28 REMARK 465 ALA B 29 REMARK 465 ALA B 30 REMARK 465 LYS B 31 REMARK 465 SER B 32 REMARK 465 SER B 33 REMARK 465 SER B 34 REMARK 465 LEU B 35 REMARK 465 ASP B 503 REMARK 465 SER B 504 REMARK 465 ASN B 505 REMARK 465 ALA B 506 REMARK 465 ASN B 507 REMARK 465 ALA B 607 REMARK 465 PRO B 608 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 100 CG1 CG2 REMARK 470 VAL B 100 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS A 302 - O HOH A 2091 2.19 REMARK 500 OE1 GLN A 418 - O HOH A 2135 1.99 REMARK 500 OD1 ASP B 450 - ND2 ASN B 479 2.09 REMARK 500 O1 SO4 A 1619 - O HOH A 2176 1.89 REMARK 500 O3 SO4 B 1613 - O HOH B 2282 2.10 REMARK 500 O2 SO4 B 1619 - O HOH B 2285 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 183 CB CYS A 183 SG -0.116 REMARK 500 CYS B 183 CB CYS B 183 SG -0.140 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 183 CA - CB - SG ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 188 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 SER B 442 N - CA - CB ANGL. DEV. = 10.4 DEGREES REMARK 500 SER B 442 C - N - CA ANGL. DEV. = 15.2 DEGREES REMARK 500 VAL B 601 N - CA - C ANGL. DEV. = 22.2 DEGREES REMARK 500 PRO B 605 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 45 118.22 -35.87 REMARK 500 LEU A 46 14.55 59.50 REMARK 500 ASP A 49 -152.89 -145.22 REMARK 500 ASP A 104 -0.03 84.43 REMARK 500 ASP A 166 36.51 -92.87 REMARK 500 LYS A 169 39.86 -170.60 REMARK 500 ILE A 306 -94.06 -115.01 REMARK 500 ASN A 341 99.91 79.77 REMARK 500 PHE A 354 -117.42 -145.51 REMARK 500 ASP A 376 55.19 -118.70 REMARK 500 ASP A 402 -143.65 -134.47 REMARK 500 GLU A 417 -8.75 -49.97 REMARK 500 ARG A 432 -120.10 -96.53 REMARK 500 SER A 442 -50.72 85.00 REMARK 500 TRP A 447 131.96 87.79 REMARK 500 LEU A 460 -5.33 80.52 REMARK 500 LYS A 492 -74.31 -122.29 REMARK 500 ALA A 502 -127.34 -137.06 REMARK 500 ASP A 503 -153.82 -150.03 REMARK 500 ASP A 544 83.76 -164.35 REMARK 500 ASN A 558 63.62 61.18 REMARK 500 ASP B 49 -152.75 -146.54 REMARK 500 ASP B 68 173.22 177.19 REMARK 500 ASP B 104 72.17 -105.64 REMARK 500 SER B 143 160.04 -48.25 REMARK 500 PRO B 227 -169.64 -72.05 REMARK 500 SER B 296 -169.66 -107.21 REMARK 500 ILE B 306 -91.68 -115.74 REMARK 500 ASN B 341 105.35 84.32 REMARK 500 PHE B 354 -117.80 -136.12 REMARK 500 ASN B 390 75.78 68.71 REMARK 500 ASN B 395 11.83 59.67 REMARK 500 ASP B 402 -146.94 -146.14 REMARK 500 ARG B 432 -119.62 -99.98 REMARK 500 SER B 442 -59.62 95.17 REMARK 500 TRP B 447 139.37 90.38 REMARK 500 LEU B 460 -0.74 78.84 REMARK 500 SER B 469 -167.21 -164.90 REMARK 500 LYS B 492 -77.75 -125.17 REMARK 500 VAL B 494 -61.97 -92.16 REMARK 500 ASP B 521 61.69 61.45 REMARK 500 ASN B 531 112.03 76.94 REMARK 500 ASP B 544 82.23 -161.95 REMARK 500 ASN B 558 65.69 65.25 REMARK 500 ASN B 563 63.91 62.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 168 LYS A 169 147.22 REMARK 500 GLY A 441 SER A 442 -143.05 REMARK 500 TYR A 501 ALA A 502 70.52 REMARK 500 ALA A 502 ASP A 503 -149.45 REMARK 500 VAL A 599 LYS A 600 -137.36 REMARK 500 VAL A 601 ASP A 602 110.21 REMARK 500 GLY A 603 LYS A 604 -139.14 REMARK 500 ASP B 102 LYS B 103 142.80 REMARK 500 THR B 440 GLY B 441 -33.61 REMARK 500 GLY B 441 SER B 442 -139.96 REMARK 500 TYR B 501 ALA B 502 40.11 REMARK 500 LYS B 600 VAL B 601 120.53 REMARK 500 VAL B 601 ASP B 602 134.91 REMARK 500 LYS B 604 PRO B 605 -81.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS A 600 -11.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS A 169 20.3 L L OUTSIDE RANGE REMARK 500 SER A 442 23.5 L L OUTSIDE RANGE REMARK 500 VAL A 599 24.1 L L OUTSIDE RANGE REMARK 500 SER B 442 10.1 L L OUTSIDE RANGE REMARK 500 VAL B 601 14.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1607 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 376 OD2 REMARK 620 2 GLY A 401 O 86.4 REMARK 620 3 HIS A 435 NE2 176.4 92.0 REMARK 620 4 HOH A2118 O 94.2 175.7 87.2 REMARK 620 5 HOH A2126 O 87.9 88.7 95.4 95.5 REMARK 620 6 HOH A2127 O 90.7 87.3 86.0 88.5 175.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1610 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2039 O REMARK 620 2 HOH A2129 O 57.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1607 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 97 NE2 REMARK 620 2 HOH B2049 O 89.4 REMARK 620 3 HOH B2155 O 91.5 89.1 REMARK 620 4 HOH A2023 O 170.6 81.9 84.8 REMARK 620 5 HOH A2077 O 89.6 89.6 178.3 93.8 REMARK 620 6 HIS A 97 NE2 98.6 171.7 93.0 90.3 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1608 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2214 O REMARK 620 2 ASP B 376 OD2 88.5 REMARK 620 3 GLY B 401 O 86.3 83.9 REMARK 620 4 HIS B 435 NE2 90.3 176.3 92.6 REMARK 620 5 HOH B2200 O 91.3 92.0 175.3 91.4 REMARK 620 6 HOH B2213 O 176.6 90.2 90.4 90.9 91.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1610 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 419 OE2 REMARK 620 2 HIS B 363 NE2 170.5 REMARK 620 3 GLN B 389 OE1 92.3 84.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1611 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 302 NE2 REMARK 620 2 GLU B 303 OE2 84.5 REMARK 620 N 1 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1615 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1616 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1617 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1618 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1619 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1620 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1621 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B1607 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B1608 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B1609 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B1610 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B1611 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1612 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1613 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1614 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1615 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1616 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1617 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1618 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1619 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B1620 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2UVF RELATED DB: PDB REMARK 900 STRUCTURE OF YERSINIA ENTEROCOLITICA FAMILY 28 REMARK 900 EXOPOLYGALACTURONASE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS REPORT THAT THIS IS MANUALLY SEQUENCED ENTRY REMARK 999 FROM AN UNKNOWN STRAIN OF Y. ENTEROCOLITICA FROM THE ATCC REMARK 999 STRAIN 9610. THIS STRAIN MATCHES THE SEQUENCED AND REMARK 999 ANNOTATED ATCC 8081 STRAIN. THIS PARTICULAR SEQUENCE DOES NOT REMARK 999 HAVE A UNIPROT ENTRY BUT DOES HAVE THE GENBANK CODE OF REMARK 999 CAL10303.1. DBREF 2UVE A 1 608 PDB 2UVE 2UVE 1 608 DBREF 2UVE B 1 608 PDB 2UVE 2UVE 1 608 SEQRES 1 A 608 MET GLN ALA GLN LEU GLN ARG PRO ARG THR THR GLY MET SEQRES 2 A 608 LEU VAL ILE MET ALA SER LEU MET VAL GLY THR PRO MET SEQRES 3 A 608 ALA MET ALA ALA LYS SER SER SER LEU ASP ALA PRO GLN SEQRES 4 A 608 GLN LEU GLN VAL PRO THR LEU ALA TYR ASP GLU SER SER SEQRES 5 A 608 ILE VAL LEU VAL TRP LYS ALA PRO GLU ASP THR ARG LYS SEQRES 6 A 608 ILE VAL ASP TYR GLN ILE PHE SER ALA GLY LYS LEU LEU SEQRES 7 A 608 GLY LYS ALA SER ASP ASN ASN ASP ASN PHE SER PRO ALA SEQRES 8 A 608 LYS PRO TYR ILE ASP HIS PHE TYR VAL ASN ASP LYS ASP SEQRES 9 A 608 ASN PHE GLN HIS LYS ILE VAL MET GLN ASN PHE THR VAL SEQRES 10 A 608 ILE GLY LEU LYS PRO GLU THR SER TYR GLN PHE THR VAL SEQRES 11 A 608 LYS ALA GLN TYR ALA ASP GLY SER LEU SER VAL ALA SER SEQRES 12 A 608 LYS PRO ILE THR ALA LYS THR SER ALA LYS PRO GLN ILE SEQRES 13 A 608 VAL ASN VAL ARG ASP PHE GLY ALA ILE ASP ASP GLY LYS SEQRES 14 A 608 THR LEU ASN THR LYS ALA ILE GLN GLN ALA ILE ASP SER SEQRES 15 A 608 CYS LYS PRO GLY CYS ARG VAL GLU ILE PRO ALA GLY THR SEQRES 16 A 608 TYR LYS SER GLY ALA LEU TRP LEU LYS SER ASP MET THR SEQRES 17 A 608 LEU ASN LEU GLN ALA GLY ALA ILE LEU LEU GLY SER GLU SEQRES 18 A 608 ASN PRO ASP ASP TYR PRO ALA GLY TYR ARG LEU TYR PRO SEQRES 19 A 608 TYR SER THR ILE GLU ARG PRO ALA SER LEU ILE ASN ALA SEQRES 20 A 608 ILE ASP PRO ASN ASN SER LYS PRO GLY THR PHE ARG ASN SEQRES 21 A 608 ILE ARG ILE THR GLY SER GLY VAL ILE ASP GLY ASN GLY SEQRES 22 A 608 TRP LEU ARG ALA LYS THR ALA GLU ILE THR ASP GLU LEU SEQRES 23 A 608 GLY ARG SER LEU PRO GLN TYR VAL ALA SER LYS ASN SER SEQRES 24 A 608 LYS VAL HIS GLU ASP GLY ILE LEU ALA LYS ASN GLN VAL SEQRES 25 A 608 GLU LYS ALA VAL SER ASP GLY MET ASP LEU LYS ASN ALA SEQRES 26 A 608 TYR GLY GLN ARG ARG SER SER LEU MET THR LEU ARG GLY SEQRES 27 A 608 VAL GLU ASN VAL TYR LEU ALA GLY PHE THR VAL ARG ASN SEQRES 28 A 608 PRO ALA PHE HIS GLY ILE MET ASN LEU GLU ASN HIS ASN SEQRES 29 A 608 VAL VAL ALA ASN GLY LEU ILE HIS GLN THR TYR ASP ALA SEQRES 30 A 608 ASN ASN GLY ASP GLY ILE GLU PHE GLY ASN SER GLN ASN SEQRES 31 A 608 VAL MET VAL PHE ASN ASN PHE PHE ASP THR GLY ASP ASP SEQRES 32 A 608 CYS ILE ASN PHE ALA ALA GLY THR GLY GLU LYS ALA GLN SEQRES 33 A 608 GLU GLN GLU PRO MET LYS GLY ALA TRP LEU PHE ASN ASN SEQRES 34 A 608 TYR PHE ARG MET GLY HIS GLY ALA ILE VAL THR GLY SER SEQRES 35 A 608 HIS THR GLY ALA TRP ILE GLU ASP ILE LEU ALA GLU ASN SEQRES 36 A 608 ASN VAL MET TYR LEU THR ASP ILE GLY LEU ARG ALA LYS SEQRES 37 A 608 SER THR SER THR ILE GLY GLY GLY ALA ARG ASN VAL THR SEQRES 38 A 608 PHE ARG ASN ASN ALA MET ARG ASP LEU ALA LYS GLN VAL SEQRES 39 A 608 MET VAL MET THR LEU ASP TYR ALA ASP SER ASN ALA ASN SEQRES 40 A 608 ILE ASP TYR PRO PRO ALA LYS ILE PRO ALA GLN PHE TYR SEQRES 41 A 608 ASP PHE THR LEU LYS ASN VAL THR VAL ASP ASN SER THR SEQRES 42 A 608 GLY LYS ASN PRO SER ILE GLU ILE LYS GLY ASP THR ALA SEQRES 43 A 608 ASN LYS ALA TRP HIS ARG LEU VAL HIS VAL ASN ASN VAL SEQRES 44 A 608 GLN LEU ASN ASN VAL THR PRO THR ALA ILE SER ASP LEU SEQRES 45 A 608 ARG ASP SER GLU PHE ASN LYS VAL THR PHE THR GLU LEU SEQRES 46 A 608 ARG GLY ASP THR PRO TRP HIS PHE SER GLU VAL LYS ASN SEQRES 47 A 608 VAL LYS VAL ASP GLY LYS PRO VAL ALA PRO SEQRES 1 B 608 MET GLN ALA GLN LEU GLN ARG PRO ARG THR THR GLY MET SEQRES 2 B 608 LEU VAL ILE MET ALA SER LEU MET VAL GLY THR PRO MET SEQRES 3 B 608 ALA MET ALA ALA LYS SER SER SER LEU ASP ALA PRO GLN SEQRES 4 B 608 GLN LEU GLN VAL PRO THR LEU ALA TYR ASP GLU SER SER SEQRES 5 B 608 ILE VAL LEU VAL TRP LYS ALA PRO GLU ASP THR ARG LYS SEQRES 6 B 608 ILE VAL ASP TYR GLN ILE PHE SER ALA GLY LYS LEU LEU SEQRES 7 B 608 GLY LYS ALA SER ASP ASN ASN ASP ASN PHE SER PRO ALA SEQRES 8 B 608 LYS PRO TYR ILE ASP HIS PHE TYR VAL ASN ASP LYS ASP SEQRES 9 B 608 ASN PHE GLN HIS LYS ILE VAL MET GLN ASN PHE THR VAL SEQRES 10 B 608 ILE GLY LEU LYS PRO GLU THR SER TYR GLN PHE THR VAL SEQRES 11 B 608 LYS ALA GLN TYR ALA ASP GLY SER LEU SER VAL ALA SER SEQRES 12 B 608 LYS PRO ILE THR ALA LYS THR SER ALA LYS PRO GLN ILE SEQRES 13 B 608 VAL ASN VAL ARG ASP PHE GLY ALA ILE ASP ASP GLY LYS SEQRES 14 B 608 THR LEU ASN THR LYS ALA ILE GLN GLN ALA ILE ASP SER SEQRES 15 B 608 CYS LYS PRO GLY CYS ARG VAL GLU ILE PRO ALA GLY THR SEQRES 16 B 608 TYR LYS SER GLY ALA LEU TRP LEU LYS SER ASP MET THR SEQRES 17 B 608 LEU ASN LEU GLN ALA GLY ALA ILE LEU LEU GLY SER GLU SEQRES 18 B 608 ASN PRO ASP ASP TYR PRO ALA GLY TYR ARG LEU TYR PRO SEQRES 19 B 608 TYR SER THR ILE GLU ARG PRO ALA SER LEU ILE ASN ALA SEQRES 20 B 608 ILE ASP PRO ASN ASN SER LYS PRO GLY THR PHE ARG ASN SEQRES 21 B 608 ILE ARG ILE THR GLY SER GLY VAL ILE ASP GLY ASN GLY SEQRES 22 B 608 TRP LEU ARG ALA LYS THR ALA GLU ILE THR ASP GLU LEU SEQRES 23 B 608 GLY ARG SER LEU PRO GLN TYR VAL ALA SER LYS ASN SER SEQRES 24 B 608 LYS VAL HIS GLU ASP GLY ILE LEU ALA LYS ASN GLN VAL SEQRES 25 B 608 GLU LYS ALA VAL SER ASP GLY MET ASP LEU LYS ASN ALA SEQRES 26 B 608 TYR GLY GLN ARG ARG SER SER LEU MET THR LEU ARG GLY SEQRES 27 B 608 VAL GLU ASN VAL TYR LEU ALA GLY PHE THR VAL ARG ASN SEQRES 28 B 608 PRO ALA PHE HIS GLY ILE MET ASN LEU GLU ASN HIS ASN SEQRES 29 B 608 VAL VAL ALA ASN GLY LEU ILE HIS GLN THR TYR ASP ALA SEQRES 30 B 608 ASN ASN GLY ASP GLY ILE GLU PHE GLY ASN SER GLN ASN SEQRES 31 B 608 VAL MET VAL PHE ASN ASN PHE PHE ASP THR GLY ASP ASP SEQRES 32 B 608 CYS ILE ASN PHE ALA ALA GLY THR GLY GLU LYS ALA GLN SEQRES 33 B 608 GLU GLN GLU PRO MET LYS GLY ALA TRP LEU PHE ASN ASN SEQRES 34 B 608 TYR PHE ARG MET GLY HIS GLY ALA ILE VAL THR GLY SER SEQRES 35 B 608 HIS THR GLY ALA TRP ILE GLU ASP ILE LEU ALA GLU ASN SEQRES 36 B 608 ASN VAL MET TYR LEU THR ASP ILE GLY LEU ARG ALA LYS SEQRES 37 B 608 SER THR SER THR ILE GLY GLY GLY ALA ARG ASN VAL THR SEQRES 38 B 608 PHE ARG ASN ASN ALA MET ARG ASP LEU ALA LYS GLN VAL SEQRES 39 B 608 MET VAL MET THR LEU ASP TYR ALA ASP SER ASN ALA ASN SEQRES 40 B 608 ILE ASP TYR PRO PRO ALA LYS ILE PRO ALA GLN PHE TYR SEQRES 41 B 608 ASP PHE THR LEU LYS ASN VAL THR VAL ASP ASN SER THR SEQRES 42 B 608 GLY LYS ASN PRO SER ILE GLU ILE LYS GLY ASP THR ALA SEQRES 43 B 608 ASN LYS ALA TRP HIS ARG LEU VAL HIS VAL ASN ASN VAL SEQRES 44 B 608 GLN LEU ASN ASN VAL THR PRO THR ALA ILE SER ASP LEU SEQRES 45 B 608 ARG ASP SER GLU PHE ASN LYS VAL THR PHE THR GLU LEU SEQRES 46 B 608 ARG GLY ASP THR PRO TRP HIS PHE SER GLU VAL LYS ASN SEQRES 47 B 608 VAL LYS VAL ASP GLY LYS PRO VAL ALA PRO HET NI A1607 1 HET NI A1608 1 HET NI A1609 1 HET NI A1610 1 HET SO4 A1611 5 HET SO4 A1612 5 HET SO4 A1613 5 HET SO4 A1614 5 HET SO4 A1615 5 HET SO4 A1616 5 HET SO4 A1617 5 HET SO4 A1618 5 HET SO4 A1619 5 HET SO4 A1620 5 HET SO4 A1621 5 HET NI B1607 1 HET NI B1608 1 HET NI B1609 1 HET NI B1610 1 HET NI B1611 1 HET SO4 B1612 5 HET SO4 B1613 5 HET SO4 B1614 5 HET SO4 B1615 5 HET SO4 B1616 5 HET SO4 B1617 5 HET SO4 B1618 5 HET SO4 B1619 5 HET ACT B1620 4 HETNAM NI NICKEL (II) ION HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION FORMUL 3 NI 9(NI 2+) FORMUL 7 SO4 19(O4 S 2-) FORMUL 31 ACT C2 H3 O2 1- FORMUL 32 HOH *463(H2 O1) HELIX 1 1 ALA A 81 SER A 89 1 9 HELIX 2 2 ALA A 91 TYR A 99 1 9 HELIX 3 3 ARG A 160 GLY A 163 5 4 HELIX 4 4 ASN A 172 SER A 182 1 11 HELIX 5 5 ASN A 222 TYR A 226 5 5 HELIX 6 6 LYS A 300 GLY A 305 1 6 HELIX 7 7 ILE A 306 ASP A 318 1 13 HELIX 8 8 ASP A 321 ARG A 329 1 9 HELIX 9 9 LYS A 414 GLN A 418 5 5 HELIX 10 10 THR A 472 GLY A 474 5 3 HELIX 11 11 ALA B 81 SER B 89 1 9 HELIX 12 12 ALA B 91 TYR B 99 1 9 HELIX 13 13 ARG B 160 GLY B 163 5 4 HELIX 14 14 ASN B 172 CYS B 183 1 12 HELIX 15 15 ASN B 222 TYR B 226 5 5 HELIX 16 16 LYS B 297 SER B 299 5 3 HELIX 17 17 LYS B 300 GLY B 305 1 6 HELIX 18 18 ILE B 306 ASP B 318 1 13 HELIX 19 19 ASP B 321 ARG B 329 1 9 HELIX 20 20 GLY B 412 GLN B 418 5 7 HELIX 21 21 THR B 545 LYS B 548 5 4 SHEET 1 AA 3 GLN A 39 GLN A 42 0 SHEET 2 AA 3 ILE A 53 LYS A 58 -1 O VAL A 56 N GLN A 42 SHEET 3 AA 3 ASN A 114 VAL A 117 -1 O PHE A 115 N LEU A 55 SHEET 1 AB 4 LYS A 76 LYS A 80 0 SHEET 2 AB 4 ILE A 66 SER A 73 -1 O ILE A 71 N LEU A 78 SHEET 3 AB 4 SER A 125 TYR A 134 -1 O THR A 129 N PHE A 72 SHEET 4 AB 4 ILE A 146 LYS A 149 -1 O ILE A 146 N PHE A 128 SHEET 1 AC18 ILE A 156 ASN A 158 0 SHEET 2 AC18 CYS A 187 ILE A 191 -1 O ARG A 188 N VAL A 157 SHEET 3 AC18 MET A 207 LEU A 211 1 O THR A 208 N VAL A 189 SHEET 4 AC18 PHE A 258 THR A 264 1 O ASN A 260 N MET A 207 SHEET 5 AC18 VAL A 339 ALA A 345 1 O GLU A 340 N ASN A 260 SHEET 6 AC18 HIS A 363 ASN A 368 1 O HIS A 363 N ASN A 341 SHEET 7 AC18 GLN A 389 PHE A 394 1 O GLN A 389 N ASN A 364 SHEET 8 AC18 MET A 421 PHE A 427 1 O LYS A 422 N ASN A 390 SHEET 9 AC18 ILE A 448 GLU A 454 1 O GLU A 449 N GLY A 423 SHEET 10 AC18 GLY A 476 LEU A 490 1 O GLY A 476 N ILE A 448 SHEET 11 AC18 VAL A 457 TYR A 459 1 O MET A 458 N ARG A 488 SHEET 12 AC18 TYR A 430 PHE A 431 1 O PHE A 431 N TYR A 459 SHEET 13 AC18 PHE A 397 ASP A 399 1 N PHE A 398 O TYR A 430 SHEET 14 AC18 ILE A 371 GLN A 373 1 O HIS A 372 N ASP A 399 SHEET 15 AC18 THR A 348 ARG A 350 1 O VAL A 349 N GLN A 373 SHEET 16 AC18 VAL A 268 ASP A 270 1 O ILE A 269 N ARG A 350 SHEET 17 AC18 ALA A 215 GLY A 219 1 O ALA A 215 N VAL A 268 SHEET 18 AC18 GLY A 194 SER A 198 1 O GLY A 194 N ILE A 216 SHEET 1 AD13 ILE A 156 ASN A 158 0 SHEET 2 AD13 CYS A 187 ILE A 191 -1 O ARG A 188 N VAL A 157 SHEET 3 AD13 MET A 207 LEU A 211 1 O THR A 208 N VAL A 189 SHEET 4 AD13 PHE A 258 THR A 264 1 O ASN A 260 N MET A 207 SHEET 5 AD13 VAL A 339 ALA A 345 1 O GLU A 340 N ASN A 260 SHEET 6 AD13 HIS A 363 ASN A 368 1 O HIS A 363 N ASN A 341 SHEET 7 AD13 GLN A 389 PHE A 394 1 O GLN A 389 N ASN A 364 SHEET 8 AD13 MET A 421 PHE A 427 1 O LYS A 422 N ASN A 390 SHEET 9 AD13 ILE A 448 GLU A 454 1 O GLU A 449 N GLY A 423 SHEET 10 AD13 GLY A 476 LEU A 490 1 O GLY A 476 N ILE A 448 SHEET 11 AD13 GLN A 518 SER A 532 1 O GLN A 518 N ALA A 477 SHEET 12 AD13 HIS A 551 ASN A 562 1 O ARG A 552 N ASP A 521 SHEET 13 AD13 ALA A 568 THR A 583 1 O ASP A 571 N HIS A 551 SHEET 1 AE 2 ALA A 228 TYR A 230 0 SHEET 2 AE 2 ARG A 240 PRO A 241 -1 O ARG A 240 N GLY A 229 SHEET 1 AF 2 ARG A 276 THR A 283 0 SHEET 2 AF 2 SER A 289 TYR A 293 -1 O LEU A 290 N ILE A 282 SHEET 1 BA 3 GLN B 39 GLN B 42 0 SHEET 2 BA 3 ILE B 53 LYS B 58 -1 O VAL B 56 N GLN B 42 SHEET 3 BA 3 ASN B 114 VAL B 117 -1 O PHE B 115 N LEU B 55 SHEET 1 BB 4 LYS B 76 LYS B 80 0 SHEET 2 BB 4 ILE B 66 SER B 73 -1 O ILE B 71 N LEU B 78 SHEET 3 BB 4 SER B 125 TYR B 134 -1 O THR B 129 N PHE B 72 SHEET 4 BB 4 ILE B 146 LYS B 149 -1 O ILE B 146 N PHE B 128 SHEET 1 BC18 ILE B 156 ASN B 158 0 SHEET 2 BC18 CYS B 187 ILE B 191 1 O ARG B 188 N VAL B 157 SHEET 3 BC18 MET B 207 LEU B 211 1 O THR B 208 N VAL B 189 SHEET 4 BC18 PHE B 258 THR B 264 1 O ASN B 260 N MET B 207 SHEET 5 BC18 VAL B 339 ALA B 345 1 O GLU B 340 N ASN B 260 SHEET 6 BC18 HIS B 363 ASN B 368 1 O HIS B 363 N ASN B 341 SHEET 7 BC18 GLN B 389 PHE B 394 1 O GLN B 389 N ASN B 364 SHEET 8 BC18 MET B 421 PHE B 427 1 O LYS B 422 N ASN B 390 SHEET 9 BC18 ILE B 448 GLU B 454 1 O GLU B 449 N GLY B 423 SHEET 10 BC18 GLY B 476 LEU B 490 1 O GLY B 476 N ILE B 448 SHEET 11 BC18 VAL B 457 TYR B 459 1 O MET B 458 N ARG B 488 SHEET 12 BC18 TYR B 430 PHE B 431 1 O PHE B 431 N TYR B 459 SHEET 13 BC18 PHE B 397 ASP B 399 1 N PHE B 398 O TYR B 430 SHEET 14 BC18 ILE B 371 GLN B 373 1 O HIS B 372 N ASP B 399 SHEET 15 BC18 THR B 348 ARG B 350 1 O VAL B 349 N GLN B 373 SHEET 16 BC18 VAL B 268 ASP B 270 1 O ILE B 269 N ARG B 350 SHEET 17 BC18 ALA B 215 GLY B 219 1 O ALA B 215 N VAL B 268 SHEET 18 BC18 GLY B 194 SER B 198 1 O GLY B 194 N ILE B 216 SHEET 1 BD14 ILE B 156 ASN B 158 0 SHEET 2 BD14 CYS B 187 ILE B 191 1 O ARG B 188 N VAL B 157 SHEET 3 BD14 MET B 207 LEU B 211 1 O THR B 208 N VAL B 189 SHEET 4 BD14 PHE B 258 THR B 264 1 O ASN B 260 N MET B 207 SHEET 5 BD14 VAL B 339 ALA B 345 1 O GLU B 340 N ASN B 260 SHEET 6 BD14 HIS B 363 ASN B 368 1 O HIS B 363 N ASN B 341 SHEET 7 BD14 GLN B 389 PHE B 394 1 O GLN B 389 N ASN B 364 SHEET 8 BD14 MET B 421 PHE B 427 1 O LYS B 422 N ASN B 390 SHEET 9 BD14 ILE B 448 GLU B 454 1 O GLU B 449 N GLY B 423 SHEET 10 BD14 GLY B 476 LEU B 490 1 O GLY B 476 N ILE B 448 SHEET 11 BD14 GLN B 518 SER B 532 1 O GLN B 518 N ALA B 477 SHEET 12 BD14 HIS B 551 ASN B 562 1 O ARG B 552 N ASP B 521 SHEET 13 BD14 LEU B 572 THR B 583 1 O ARG B 573 N LEU B 553 SHEET 14 BD14 LYS B 597 VAL B 601 1 O LYS B 597 N ASP B 574 SHEET 1 BE12 LEU B 201 TRP B 202 0 SHEET 2 BE12 ILE B 245 ALA B 247 1 N ASN B 246 O LEU B 201 SHEET 3 BE12 MET B 334 ARG B 337 1 O THR B 335 N ALA B 247 SHEET 4 BE12 ILE B 357 LEU B 360 1 O MET B 358 N LEU B 336 SHEET 5 BE12 ILE B 383 GLY B 386 1 O GLU B 384 N ASN B 359 SHEET 6 BE12 ILE B 405 ALA B 408 1 O ASN B 406 N PHE B 385 SHEET 7 BE12 ILE B 438 GLY B 441 1 O VAL B 439 N PHE B 407 SHEET 8 BE12 ILE B 463 SER B 469 1 O GLY B 464 N ILE B 438 SHEET 9 BE12 GLN B 493 LEU B 499 1 O GLN B 493 N GLY B 464 SHEET 10 BE12 ILE B 539 LYS B 542 1 O GLU B 540 N MET B 497 SHEET 11 BE12 ALA B 568 SER B 570 1 O ALA B 568 N ILE B 541 SHEET 12 BE12 PHE B 593 SER B 594 1 N SER B 594 O ILE B 569 SHEET 1 BF 2 ALA B 228 TYR B 230 0 SHEET 2 BF 2 ARG B 240 PRO B 241 -1 O ARG B 240 N GLY B 229 SHEET 1 BG 2 ARG B 276 THR B 283 0 SHEET 2 BG 2 SER B 289 TYR B 293 -1 O LEU B 290 N ILE B 282 SSBOND 1 CYS A 183 CYS A 187 1555 1555 2.05 SSBOND 2 CYS B 183 CYS B 187 1555 1555 2.05 LINK OG SER A 442 O4 SO4 A1621 1555 1555 1.91 LINK O ASN A 598 O3 SO4 A1616 1555 1555 2.02 LINK NI NI A1607 NE2 HIS A 435 1555 1555 2.32 LINK NI NI A1607 O HOH A2118 1555 1555 2.21 LINK NI NI A1607 O HOH A2126 1555 1555 2.36 LINK NI NI A1607 O HOH A2127 1555 1555 2.22 LINK NI NI A1607 OD2 ASP A 376 1555 1555 2.08 LINK NI NI A1607 O GLY A 401 1555 1555 2.10 LINK NI NI A1609 OD1 ASP A 83 1555 1555 2.02 LINK NI NI A1610 O HOH A2129 1555 1555 2.61 LINK NI NI A1610 O HOH A2039 1555 1555 2.49 LINK NI NI B1607 O HOH B2155 1555 1555 2.16 LINK NI NI B1607 O HOH A2023 1555 1555 2.30 LINK NI NI B1607 O HOH A2077 1555 1555 2.19 LINK NI NI B1607 NE2 HIS A 97 1555 1555 2.18 LINK NI NI B1607 NE2 HIS B 97 1555 1555 2.24 LINK NI NI B1607 O HOH B2049 1555 1555 2.11 LINK NI NI B1608 NE2 HIS B 435 1555 1555 2.18 LINK NI NI B1608 O HOH B2200 1555 1555 2.16 LINK NI NI B1608 O HOH B2213 1555 1555 2.24 LINK NI NI B1608 O GLY B 401 1555 1555 2.20 LINK NI NI B1608 OD2 ASP B 376 1555 1555 2.12 LINK NI NI B1608 O HOH B2214 1555 1555 2.21 LINK NI NI B1610 OE1 GLN B 389 1555 1555 2.26 LINK NI NI B1610 NE2 HIS B 363 1555 1555 2.18 LINK NI NI B1610 OE2 GLU B 419 1555 1555 1.97 LINK NI NI B1611 OE2 GLU B 303 1555 1555 2.69 LINK NI NI B1611 NE2 HIS B 302 1555 1555 2.23 CISPEP 1 TYR A 375 ASP A 376 0 -4.30 CISPEP 2 THR A 440 GLY A 441 0 -23.77 CISPEP 3 ASP A 602 GLY A 603 0 -1.76 CISPEP 4 LYS B 103 ASP B 104 0 12.66 CISPEP 5 TYR B 375 ASP B 376 0 -1.94 CISPEP 6 ILE B 508 ASP B 509 0 -7.46 CISPEP 7 ASP B 602 GLY B 603 0 6.70 SITE 1 AC1 6 ASP A 376 GLY A 401 HIS A 435 HOH A2118 SITE 2 AC1 6 HOH A2126 HOH A2127 SITE 1 AC2 2 ASP A 270 ARG A 276 SITE 1 AC3 1 ASP A 83 SITE 1 AC4 2 HOH A2039 HOH A2129 SITE 1 AC5 5 TYR A 230 ARG A 231 GLU A 239 PRO A 250 SITE 2 AC5 5 ARG A 337 SITE 1 AC6 2 LYS A 58 ARG A 483 SITE 1 AC7 4 ASN A 378 ASN A 379 HOH A2172 HOH A2173 SITE 1 AC8 5 PRO A 566 GLY A 587 ASP A 588 THR A 589 SITE 2 AC8 5 HIS A 592 SITE 1 AC9 5 TYR A 94 ARG A 288 ILE A 371 GLN A 373 SITE 2 AC9 5 PHE A 397 SITE 1 BC1 5 SER A 575 GLU A 576 ASN A 598 VAL A 599 SITE 2 BC1 5 LYS A 600 SITE 1 BC2 4 PHE A 88 SER A 89 PRO A 90 HOH A2174 SITE 1 BC3 3 ASP A 167 GLY A 168 LYS A 169 SITE 1 BC4 5 ARG A 240 PHE A 354 HIS A 355 HOH A2175 SITE 2 BC4 5 HOH A2176 SITE 1 BC5 7 ALA A 47 TYR A 48 ASP A 49 SER A 52 SITE 2 BC5 7 ARG A 262 TYR A 343 HOH A2177 SITE 1 BC6 2 SER A 442 LYS A 468 SITE 1 BC7 6 HIS A 97 HOH A2023 HOH A2077 HIS B 97 SITE 2 BC7 6 HOH B2049 HOH B2155 SITE 1 BC8 6 ASP B 376 GLY B 401 HIS B 435 HOH B2200 SITE 2 BC8 6 HOH B2213 HOH B2214 SITE 1 BC9 1 ASP B 270 SITE 1 CC1 3 HIS B 363 GLN B 389 GLU B 419 SITE 1 CC2 2 HIS B 302 GLU B 303 SITE 1 CC3 5 TYR B 230 ARG B 231 GLU B 239 PRO B 250 SITE 2 CC3 5 ARG B 337 SITE 1 CC4 4 LYS B 58 ARG B 483 HOH B2282 HOH B2283 SITE 1 CC5 5 PRO B 566 GLY B 587 ASP B 588 THR B 589 SITE 2 CC5 5 HIS B 592 SITE 1 CC6 4 ASN B 87 PHE B 88 SER B 89 PRO B 90 SITE 1 CC7 2 GLN B 40 GLN B 42 SITE 1 CC8 4 ARG B 488 ASP B 530 ASN B 531 HOH B2284 SITE 1 CC9 3 ASN B 378 ASN B 379 SO4 B1619 SITE 1 DC1 5 ASP B 402 HIS B 435 LYS B 468 SO4 B1618 SITE 2 DC1 5 HOH B2285 SITE 1 DC2 6 HIS B 97 TYR B 430 TYR B 459 ARG B 488 SITE 2 DC2 6 HOH B2046 HOH B2048 CRYST1 89.952 78.763 98.192 90.00 103.61 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011117 0.000000 0.002692 0.00000 SCALE2 0.000000 0.012696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010478 0.00000