PDB Short entry for 2V0U HEADER TRANSFERASE 18-MAY-07 2V0U TITLE N- AND C-TERMINAL HELICES OF OAT LOV2 (404-546) ARE INVOLVED IN LIGHT- TITLE 2 INDUCED SIGNAL TRANSDUCTION (CRYO DARK STRUCTURE OF LOV2 (404-546)) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NPH1-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGHT, OXYGEN, VOLTAGE DOMAIN, RESIDUES 404-546; COMPND 5 SYNONYM: LOV2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AVENA SATIVA; SOURCE 3 ORGANISM_COMMON: OAT; SOURCE 4 ORGANISM_TAXID: 4498; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHIS-GB1-PARALLEL1 KEYWDS LOV2, KINASE, TRANSFERASE, ATP-BINDING, AVENA SATIVA, KEYWDS 2 SERINE/THREONINE-PROTEIN KINASE, LIGHT-INDUCED SIGNAL TRANSDUCTION, KEYWDS 3 PHOTOTROPIN1, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.S.HALAVATY,K.MOFFAT REVDAT 4 13-DEC-23 2V0U 1 REMARK REVDAT 3 13-JUL-11 2V0U 1 VERSN REVDAT 2 24-FEB-09 2V0U 1 VERSN REVDAT 1 11-DEC-07 2V0U 0 JRNL AUTH A.S.HALAVATY,K.MOFFAT JRNL TITL N- AND C-TERMINAL FLANKING REGIONS MODULATE LIGHT-INDUCED JRNL TITL 2 SIGNAL TRANSDUCTION IN THE LOV2 DOMAIN OF THE BLUE LIGHT JRNL TITL 3 SENSOR PHOTOTROPIN 1 FROM AVENA SATIVA. JRNL REF BIOCHEMISTRY V. 46 14001 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 18001137 JRNL DOI 10.1021/BI701543E REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 25307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1340 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1754 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 106 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1186 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 173 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.874 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1331 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 928 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1808 ; 1.293 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2270 ; 0.887 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 164 ; 6.182 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;29.620 ;24.627 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 239 ;11.158 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;12.939 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 205 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1442 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 255 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 250 ; 0.246 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1030 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 668 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 676 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 107 ; 0.115 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.225 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 84 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.152 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1016 ; 0.939 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1252 ; 1.022 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 668 ; 2.109 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 548 ; 2.976 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 414 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3380 -6.6860 11.2570 REMARK 3 T TENSOR REMARK 3 T11: 0.0087 T22: -0.0805 REMARK 3 T33: -0.0069 T12: -0.0207 REMARK 3 T13: 0.0053 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.6604 L22: 2.4384 REMARK 3 L33: 3.9334 L12: 0.0516 REMARK 3 L13: -1.6502 L23: 0.4435 REMARK 3 S TENSOR REMARK 3 S11: -0.0773 S12: -0.0077 S13: -0.1326 REMARK 3 S21: 0.0014 S22: -0.0113 S23: 0.1587 REMARK 3 S31: 0.1679 S32: -0.2855 S33: 0.0886 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 415 A 516 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5030 1.0160 6.9860 REMARK 3 T TENSOR REMARK 3 T11: 0.0221 T22: -0.0950 REMARK 3 T33: -0.0321 T12: -0.0011 REMARK 3 T13: -0.0112 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.4878 L22: 0.6480 REMARK 3 L33: 0.7761 L12: -0.2738 REMARK 3 L13: -0.6571 L23: -0.0634 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.1181 S13: 0.0170 REMARK 3 S21: 0.0153 S22: 0.0243 S23: 0.0021 REMARK 3 S31: 0.0047 S32: 0.0392 S33: -0.0055 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 517 A 546 REMARK 3 ORIGIN FOR THE GROUP (A): 9.6380 -0.1450 -5.3370 REMARK 3 T TENSOR REMARK 3 T11: 0.0270 T22: -0.0663 REMARK 3 T33: -0.0408 T12: 0.0031 REMARK 3 T13: -0.0179 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.0328 L22: 0.8007 REMARK 3 L33: 2.1174 L12: -0.2901 REMARK 3 L13: -0.3766 L23: 0.0784 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: 0.0716 S13: 0.0392 REMARK 3 S21: -0.0098 S22: 0.0084 S23: -0.0052 REMARK 3 S31: 0.0129 S32: -0.1065 S33: -0.0130 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2V0U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1290032598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 105 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : BENT GE(111) MONOCHROMATOR REMARK 200 OPTICS : BENT CONICAL SI-MIRROR (RH REMARK 200 COATED) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26704 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 36.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1G28 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.77450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.38900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.06450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.38900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.77450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.06450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2074 O HOH A 2145 1655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 403 71.81 61.40 REMARK 500 PRO A 423 131.63 -36.72 REMARK 500 ASP A 522 -125.84 48.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2006 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH A2009 DISTANCE = 5.99 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A1547 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1548 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1549 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1551 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1552 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1553 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V0W RELATED DB: PDB REMARK 900 N- AND C-TERMINAL HELICES OF OAT LOV2 ( 404-546) ARE INVOLVED IN REMARK 900 LIGHT-INDUCED SIGNAL TRANSDUCTION (CRYO-TRAPPED LIGHT STRUCTURE OF REMARK 900 LOV2 (404-546)) REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST THREE N-TERMINAL RESIDUES DO NOT BELONG TO LOV2 REMARK 999 SEQUENCE DBREF 2V0U A 401 403 PDB 2V0U 2V0U 401 403 DBREF 2V0U A 404 546 UNP O49003 O49003_AVESA 404 546 SEQRES 1 A 146 GLY GLU PHE LEU ALA THR THR LEU GLU ARG ILE GLU LYS SEQRES 2 A 146 ASN PHE VAL ILE THR ASP PRO ARG LEU PRO ASP ASN PRO SEQRES 3 A 146 ILE ILE PHE ALA SER ASP SER PHE LEU GLN LEU THR GLU SEQRES 4 A 146 TYR SER ARG GLU GLU ILE LEU GLY ARG ASN CYS ARG PHE SEQRES 5 A 146 LEU GLN GLY PRO GLU THR ASP ARG ALA THR VAL ARG LYS SEQRES 6 A 146 ILE ARG ASP ALA ILE ASP ASN GLN THR GLU VAL THR VAL SEQRES 7 A 146 GLN LEU ILE ASN TYR THR LYS SER GLY LYS LYS PHE TRP SEQRES 8 A 146 ASN LEU PHE HIS LEU GLN PRO MET ARG ASP GLN LYS GLY SEQRES 9 A 146 ASP VAL GLN TYR PHE ILE GLY VAL GLN LEU ASP GLY THR SEQRES 10 A 146 GLU HIS VAL ARG ASP ALA ALA GLU ARG GLU GLY VAL MET SEQRES 11 A 146 LEU ILE LYS LYS THR ALA GLU ASN ILE ASP GLU ALA ALA SEQRES 12 A 146 LYS GLU LEU HET FMN A1547 31 HET GOL A1548 6 HET GOL A1549 6 HET GOL A1550 6 HET GOL A1551 6 HET GOL A1552 6 HET GOL A1553 6 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM GOL GLYCEROL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 GOL 6(C3 H8 O3) FORMUL 9 HOH *173(H2 O) HELIX 1 1 THR A 407 ILE A 411 5 5 HELIX 2 2 SER A 431 GLU A 439 1 9 HELIX 3 3 SER A 441 LEU A 446 1 6 HELIX 4 4 ASN A 449 GLN A 454 5 6 HELIX 5 5 ASP A 459 ASN A 472 1 14 HELIX 6 6 ARG A 521 LYS A 544 1 24 SHEET 1 AA 5 ILE A 427 ALA A 430 0 SHEET 2 AA 5 PHE A 415 THR A 418 -1 O ILE A 417 N ILE A 428 SHEET 3 AA 5 VAL A 506 GLY A 516 -1 O PHE A 509 N THR A 418 SHEET 4 AA 5 LYS A 489 ARG A 500 -1 O TRP A 491 N GLY A 516 SHEET 5 AA 5 VAL A 476 TYR A 483 -1 O VAL A 476 N LEU A 496 SITE 1 AC1 23 VAL A 416 THR A 418 ASN A 425 ASN A 449 SITE 2 AC1 23 CYS A 450 ARG A 451 LEU A 453 GLN A 454 SITE 3 AC1 23 VAL A 463 ARG A 467 ILE A 470 LEU A 480 SITE 4 AC1 23 ASN A 482 ASN A 492 PHE A 494 PHE A 509 SITE 5 AC1 23 GLY A 511 GLN A 513 HOH A2039 HOH A2162 SITE 6 AC1 23 HOH A2163 HOH A2164 HOH A2165 SITE 1 AC2 6 THR A 477 GLN A 479 LEU A 493 LYS A 503 SITE 2 AC2 6 GLU A 525 HOH A2107 SITE 1 AC3 5 PHE A 403 LEU A 404 LYS A 503 GLU A 525 SITE 2 AC3 5 ARG A 526 SITE 1 AC4 7 PRO A 456 GLU A 457 ARG A 460 ASN A 538 SITE 2 AC4 7 HOH A2073 HOH A2169 HOH A2170 SITE 1 AC5 6 THR A 407 ARG A 451 GLN A 454 HOH A2065 SITE 2 AC5 6 HOH A2162 HOH A2171 SITE 1 AC6 5 ASN A 414 SER A 433 LYS A 489 ASP A 515 SITE 2 AC6 5 HOH A2173 SITE 1 AC7 6 ALA A 461 ARG A 464 LYS A 465 GLN A 473 SITE 2 AC7 6 ARG A 500 HOH A2146 CRYST1 35.549 56.129 66.778 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028130 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017816 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014975 0.00000