PDB Short entry for 2VLW HEADER TOXIN 17-JAN-08 2VLW TITLE CRYSTAL STRUCTURE OF THE MUSCARINIC TOXIN MT7 DIIODOTYR51 DERIVATIVE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUSCARINIC M1-TOXIN1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: M1-TOXIN, MUSCARINIC TOXIN 7, MT7, MT-7, MUSCARINIC SNAKE COMPND 5 TOXIN; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: DI-IODO TYROSINE AT POSITION 51 SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: DENDROASPIS ANGUSTICEPS; SOURCE 4 ORGANISM_COMMON: EASTERN GREEN MAMBA; SOURCE 5 ORGANISM_TAXID: 8618; SOURCE 6 OTHER_DETAILS: CHEMICAL PEPTIDE SYNTHESIS ACCORDING TO SEQUENCE. KEYWDS ACETYLCHOLINE RECEPTOR INHIBITOR, GREEN MAMBA SNAKE TOXIN, HM1 KEYWDS 2 MUSCARINIC RECEPTOR, TOXIN, SECRETED, NEUROTOXIN, DIIODOTYROSINE, KEYWDS 3 MUSCARINIC TOXIN, POSTSYNAPTIC NEUROTOXIN EXPDTA X-RAY DIFFRACTION AUTHOR R.MENEZ,V.GRANATA,G.MOURIER,C.FRUCHART-GAILLARD,A.MENEZ,D.SERVANT, AUTHOR 2 E.A.STURA REVDAT 4 13-DEC-23 2VLW 1 LINK REVDAT 3 24-FEB-09 2VLW 1 VERSN REVDAT 2 25-NOV-08 2VLW 1 JRNL REVDAT 1 14-OCT-08 2VLW 0 JRNL AUTH C.FRUCHART-GAILLARD,G.MOURIER,C.MARQUER,E.STURA, JRNL AUTH 2 N.J.M.BIRDSALL,D.SERVENT JRNL TITL DIFFERENT INTERACTIONS BETWEEN MT7 TOXIN AND THE HUMAN JRNL TITL 2 MUSCARINIC M1 RECEPTOR IN ITS FREE AND JRNL TITL 3 N-METHYLSCOPOLAMINE-OCCUPIED STATES. JRNL REF MOL.PHARMACOL. V. 74 1554 2008 JRNL REFN ISSN 0026-895X JRNL PMID 18784346 JRNL DOI 10.1124/MOL.108.050773 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.MENEZ,V.GRANATA,G.MOURIER,M.H.LEDU,D.SERVANT,A.MENEZ, REMARK 1 AUTH 2 E.A.STURA REMARK 1 TITL COMPARISON OF THE STRUCTURES OF TWO MUSCARINIC TOXINS FROM REMARK 1 TITL 2 GREEN MAMBA VENOM REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 24835 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1309 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1434 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1042 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 173 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : -0.70000 REMARK 3 B33 (A**2) : 0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.17000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.071 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.067 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.217 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1087 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 893 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1479 ; 1.620 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2100 ; 0.994 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 128 ; 7.076 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 48 ;31.850 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 176 ;13.341 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;10.844 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 148 ; 0.285 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1194 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 222 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 200 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 906 ; 0.198 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 515 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 625 ; 0.093 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 92 ; 0.241 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.414 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 79 ; 0.335 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.397 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 659 ; 1.038 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1060 ; 1.822 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 502 ; 2.919 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 419 ; 3.971 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VLW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1290035040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.937801 REMARK 200 MONOCHROMATOR : CHANNEL-CUT SILICON REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24835 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 45.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.50 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1FF4 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.25M AMMONIUM SULFATE, 90MM SODIUM REMARK 280 CITRATE, 10% 4-METHYL PENTANEDIOL, PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.28850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2021 O HOH B 2043 1.52 REMARK 500 O HOH A 2015 O HOH A 2032 1.55 REMARK 500 O HOH A 2030 O HOH B 2042 1.55 REMARK 500 CZ PHE A 11 O HOH A 2011 1.99 REMARK 500 CE1 PHE A 11 O HOH A 2011 2.14 REMARK 500 NZ LYS A 48 O HOH A 2053 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2007 O HOH B 2021 2455 1.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 7 -157.31 -166.68 REMARK 500 ASN B 7 -158.47 -164.10 REMARK 500 THR B 13 -163.51 -161.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 SULFATE ION (SO4): SO4 FROM CRYSTALLIZATION PRECIPITANT OR REMARK 600 CRYOSALT. REMARK 600 ACETATE ION (ACT): ACETATE FROM PROTEIN BUFFER. REMARK 600 3,5-DIIODOTYROSINE (TYI): 3,5-DIIODOTYROSINE INTRODUCED BY REMARK 600 CHEMICAL SYNTHESIS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A1067 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1068 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1067 REMARK 999 REMARK 999 SEQUENCE REMARK 999 Y51 IS DIIODINATED DBREF 2VLW A 1 65 UNP Q8QGR0 NXM11_DENAN 22 86 DBREF 2VLW B 1 65 UNP Q8QGR0 NXM11_DENAN 22 86 SEQRES 1 A 65 LEU THR CYS VAL LYS SER ASN SER ILE TRP PHE PRO THR SEQRES 2 A 65 SER GLU ASP CYS PRO ASP GLY GLN ASN LEU CYS PHE LYS SEQRES 3 A 65 ARG TRP GLN TYR ILE SER PRO ARG MET TYR ASP PHE THR SEQRES 4 A 65 ARG GLY CYS ALA ALA THR CYS PRO LYS ALA GLU TYI ARG SEQRES 5 A 65 ASP VAL ILE ASN CYS CYS GLY THR ASP LYS CYS ASN LYS SEQRES 1 B 65 LEU THR CYS VAL LYS SER ASN SER ILE TRP PHE PRO THR SEQRES 2 B 65 SER GLU ASP CYS PRO ASP GLY GLN ASN LEU CYS PHE LYS SEQRES 3 B 65 ARG TRP GLN TYR ILE SER PRO ARG MET TYR ASP PHE THR SEQRES 4 B 65 ARG GLY CYS ALA ALA THR CYS PRO LYS ALA GLU TYI ARG SEQRES 5 B 65 ASP VAL ILE ASN CYS CYS GLY THR ASP LYS CYS ASN LYS MODRES 2VLW TYI A 51 TYR 3,5-DIIODOTYROSINE MODRES 2VLW TYI B 51 TYR 3,5-DIIODOTYROSINE HET TYI A 51 14 HET TYI B 51 14 HET ACT A1067 4 HET SO4 A1068 5 HET SO4 B1067 5 HETNAM TYI 3,5-DIIODOTYROSINE HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION FORMUL 1 TYI 2(C9 H9 I2 N O3) FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *173(H2 O) SHEET 1 AA 2 THR A 2 LYS A 5 0 SHEET 2 AA 2 THR A 13 ASP A 16 -1 O THR A 13 N LYS A 5 SHEET 1 AB 3 MET A 35 ALA A 43 0 SHEET 2 AB 3 LEU A 23 SER A 32 -1 O LEU A 23 N ALA A 43 SHEET 3 AB 3 ASP A 53 CYS A 58 -1 O VAL A 54 N TRP A 28 SHEET 1 BA 2 THR B 2 LYS B 5 0 SHEET 2 BA 2 THR B 13 ASP B 16 -1 O THR B 13 N LYS B 5 SHEET 1 BB 3 MET B 35 ALA B 43 0 SHEET 2 BB 3 LEU B 23 SER B 32 -1 O LEU B 23 N ALA B 43 SHEET 3 BB 3 ASP B 53 CYS B 58 -1 O VAL B 54 N TRP B 28 SSBOND 1 CYS A 3 CYS A 24 1555 1555 2.06 SSBOND 2 CYS A 17 CYS A 42 1555 1555 2.07 SSBOND 3 CYS A 46 CYS A 57 1555 1555 2.09 SSBOND 4 CYS A 58 CYS A 63 1555 1555 2.00 SSBOND 5 CYS B 3 CYS B 24 1555 1555 2.04 SSBOND 6 CYS B 17 CYS B 42 1555 1555 2.08 SSBOND 7 CYS B 46 CYS B 57 1555 1555 2.07 SSBOND 8 CYS B 58 CYS B 63 1555 1555 2.00 LINK C GLU A 50 N TYI A 51 1555 1555 1.33 LINK C TYI A 51 N ARG A 52 1555 1555 1.33 LINK C GLU B 50 N TYI B 51 1555 1555 1.33 LINK C TYI B 51 N ARG B 52 1555 1555 1.32 SITE 1 AC1 4 TYI A 51 VAL A 54 TYR B 30 TYI B 51 SITE 1 AC2 4 ARG A 52 HOH A2082 HOH A2083 ARG B 52 SITE 1 AC3 5 ASN B 7 SER B 8 HOH B2087 HOH B2089 SITE 2 AC3 5 HOH B2090 CRYST1 26.766 56.577 45.308 90.00 95.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.037361 0.000000 0.003380 0.00000 SCALE2 0.000000 0.017675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022161 0.00000 MTRIX1 1 -0.999970 0.004690 0.006100 -13.38899 1 MTRIX2 1 -0.004680 -0.999990 0.000670 -22.16051 1 MTRIX3 1 0.006100 0.000640 0.999980 0.04153 1