PDB Short entry for 2VRE HEADER ISOMERASE 31-MAR-08 2VRE TITLE CRYSTAL STRUCTURE OF HUMAN PEROXISOMAL DELTA3,5,DELTA2,4-DIENOYL COA TITLE 2 ISOMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: RESIDUES 50-322; COMPND 5 SYNONYM: PEROXISOMAL ENOYL-COENZYME A HYDRATASE-LIKE PROTEIN, ECH1; COMPND 6 EC: 5.3.3.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: PEROXISOME; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS FATTY ACID METABOLISM, 4-DIENOYL-COA ISOMERASE, MITOCHONDRION, KEYWDS 2 PHOSPHOPROTEIN, DELTA3, 5-DELTA2, ISOMERASE, PEROXISOME, TRANSIT KEYWDS 3 PEPTIDE, LIPID METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR W.YUE,K.GUO,F.VON DELFT,E.PILKA,J.MURRAY,A.ROOS,G.KOCHAN,C.BOUNTRA, AUTHOR 2 C.ARROWSMITH,M.WIKSTROM,A.EDWARDS,U.OPPERMANN REVDAT 5 13-DEC-23 2VRE 1 ATOM REVDAT 4 24-JAN-18 2VRE 1 AUTHOR JRNL REVDAT 3 13-JUL-11 2VRE 1 VERSN REVDAT 2 24-FEB-09 2VRE 1 VERSN REVDAT 1 15-APR-08 2VRE 0 JRNL AUTH W.YUE,K.GUO,F.VON DELFT,E.PILKA,J.MURRAY,A.ROOS,G.KOCHAN, JRNL AUTH 2 C.BOUNTRA,C.ARROWSMITH,M.WIKSTROM,A.EDWARDS,U.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF HUMAN PEROXISOMAL DELTA3,5, JRNL TITL 2 DELTA2,4-DIENOYL COA ISOMERASE (ECH1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 93.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 58508 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3132 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4280 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2120 REMARK 3 BIN FREE R VALUE SET COUNT : 237 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6005 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 393 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.96000 REMARK 3 B22 (A**2) : -0.29000 REMARK 3 B33 (A**2) : 1.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.132 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.636 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6157 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8356 ; 1.348 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 805 ; 6.104 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 260 ;36.188 ;24.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1027 ;14.115 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;15.276 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 973 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4621 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3991 ; 1.706 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6386 ; 2.641 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2166 ; 4.711 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1966 ; 6.799 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 26 A 35 4 REMARK 3 1 B 26 B 35 4 REMARK 3 1 C 26 C 35 4 REMARK 3 2 A 39 A 290 4 REMARK 3 2 B 39 B 290 4 REMARK 3 2 C 39 C 290 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1902 ; 0.21 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1902 ; 0.22 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1902 ; 0.22 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1902 ; 2.22 ; 10.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1902 ; 2.23 ; 10.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1902 ; 2.08 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 95 A 107 1 REMARK 3 1 B 95 B 107 1 REMARK 3 1 C 95 C 107 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 75 ; 0.02 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 75 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 75 ; 0.02 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 75 ; 1.90 ; 10.00 REMARK 3 TIGHT THERMAL 2 B (A**2): 75 ; 1.94 ; 10.00 REMARK 3 TIGHT THERMAL 2 C (A**2): 75 ; 3.03 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 22 B 24 4 REMARK 3 1 C 22 C 24 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 A (A): 16 ; 0.28 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 16 ; 1.59 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 26 REMARK 3 ORIGIN FOR THE GROUP (A): 61.2746 9.5300 -34.9312 REMARK 3 T TENSOR REMARK 3 T11: -0.0621 T22: 0.0393 REMARK 3 T33: 0.0093 T12: 0.0176 REMARK 3 T13: 0.0734 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 2.8904 L22: 9.2588 REMARK 3 L33: 6.8582 L12: -0.2132 REMARK 3 L13: 0.5211 L23: -4.8358 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: -0.1519 S13: 0.1353 REMARK 3 S21: 0.4512 S22: 0.1891 S23: 0.6107 REMARK 3 S31: -0.1132 S32: -0.4500 S33: -0.1777 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 92 REMARK 3 ORIGIN FOR THE GROUP (A): 46.9097 9.1202 -29.8012 REMARK 3 T TENSOR REMARK 3 T11: 0.0131 T22: 0.0734 REMARK 3 T33: -0.1087 T12: 0.0867 REMARK 3 T13: 0.1036 T23: 0.0733 REMARK 3 L TENSOR REMARK 3 L11: 3.1022 L22: 2.3393 REMARK 3 L33: 2.4756 L12: -0.2603 REMARK 3 L13: 0.6246 L23: -0.0519 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: 0.6124 S13: -0.1887 REMARK 3 S21: -0.5736 S22: -0.1196 S23: -0.1333 REMARK 3 S31: 0.0380 S32: 0.0637 S33: 0.0229 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 27.5438 -2.8558 -35.4102 REMARK 3 T TENSOR REMARK 3 T11: 0.2686 T22: 0.2838 REMARK 3 T33: 0.2527 T12: -0.0019 REMARK 3 T13: 0.0142 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.8650 L22: 10.2551 REMARK 3 L33: 0.1187 L12: 4.3733 REMARK 3 L13: 0.4704 L23: 1.1032 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.0055 S13: 0.0805 REMARK 3 S21: -0.0349 S22: 0.0531 S23: 0.3960 REMARK 3 S31: 0.1572 S32: -0.2205 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6561 -4.3699 -23.2970 REMARK 3 T TENSOR REMARK 3 T11: -0.0224 T22: -0.0095 REMARK 3 T33: -0.1021 T12: 0.0497 REMARK 3 T13: -0.0134 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 9.6464 L22: 6.0835 REMARK 3 L33: 0.7576 L12: 7.3040 REMARK 3 L13: 1.6139 L23: 1.6638 REMARK 3 S TENSOR REMARK 3 S11: 0.0973 S12: 0.2567 S13: -0.4309 REMARK 3 S21: -0.2566 S22: 0.0001 S23: -0.2857 REMARK 3 S31: 0.1802 S32: -0.0909 S33: -0.0973 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 281 REMARK 3 ORIGIN FOR THE GROUP (A): 40.4096 15.2185 -16.0282 REMARK 3 T TENSOR REMARK 3 T11: -0.1182 T22: -0.1420 REMARK 3 T33: -0.1390 T12: 0.0469 REMARK 3 T13: 0.0618 T23: 0.0957 REMARK 3 L TENSOR REMARK 3 L11: 1.1472 L22: 1.1485 REMARK 3 L33: 1.4538 L12: -0.2060 REMARK 3 L13: 0.5535 L23: -0.3391 REMARK 3 S TENSOR REMARK 3 S11: 0.0924 S12: 0.2845 S13: 0.2083 REMARK 3 S21: -0.2132 S22: -0.0541 S23: -0.0570 REMARK 3 S31: -0.0946 S32: 0.0043 S33: -0.0383 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 21 B 26 REMARK 3 ORIGIN FOR THE GROUP (A): 42.8890 29.9702 28.7135 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.1094 REMARK 3 T33: 0.0568 T12: -0.0045 REMARK 3 T13: 0.0296 T23: -0.0518 REMARK 3 L TENSOR REMARK 3 L11: 3.1240 L22: 16.5595 REMARK 3 L33: 4.3824 L12: 2.1847 REMARK 3 L13: 0.8443 L23: -7.3118 REMARK 3 S TENSOR REMARK 3 S11: -0.2802 S12: -0.1414 S13: -0.0053 REMARK 3 S21: -0.4302 S22: 0.4977 S23: 0.2514 REMARK 3 S31: 0.0323 S32: -0.0430 S33: -0.2175 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 27 B 92 REMARK 3 ORIGIN FOR THE GROUP (A): 46.2698 25.8221 18.0337 REMARK 3 T TENSOR REMARK 3 T11: 0.0517 T22: -0.0361 REMARK 3 T33: 0.0442 T12: -0.0021 REMARK 3 T13: -0.0241 T23: -0.1686 REMARK 3 L TENSOR REMARK 3 L11: 3.2739 L22: 1.9251 REMARK 3 L33: 1.8711 L12: -0.3089 REMARK 3 L13: -0.2356 L23: -0.2716 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: -0.5714 S13: 0.4427 REMARK 3 S21: 0.3630 S22: 0.0353 S23: -0.2459 REMARK 3 S31: -0.1887 S32: 0.3510 S33: -0.0264 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 93 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): 64.2650 12.8670 9.3503 REMARK 3 T TENSOR REMARK 3 T11: 0.3842 T22: 0.3301 REMARK 3 T33: 0.4132 T12: 0.0318 REMARK 3 T13: -0.0022 T23: -0.0504 REMARK 3 L TENSOR REMARK 3 L11: 1.3829 L22: 10.7539 REMARK 3 L33: 2.1067 L12: -3.8564 REMARK 3 L13: 1.7069 L23: -4.7597 REMARK 3 S TENSOR REMARK 3 S11: 0.2897 S12: 0.0863 S13: -0.2282 REMARK 3 S21: -0.9090 S22: -0.5537 S23: -0.6283 REMARK 3 S31: 0.4124 S32: 0.2046 S33: 0.2640 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 108 B 132 REMARK 3 ORIGIN FOR THE GROUP (A): 52.2262 7.2174 10.2480 REMARK 3 T TENSOR REMARK 3 T11: -0.1290 T22: -0.1443 REMARK 3 T33: -0.1590 T12: -0.0564 REMARK 3 T13: -0.0507 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 8.9960 L22: 9.2202 REMARK 3 L33: 2.6245 L12: -8.2240 REMARK 3 L13: -2.7527 L23: 3.0779 REMARK 3 S TENSOR REMARK 3 S11: -0.2019 S12: -0.6138 S13: 0.1226 REMARK 3 S21: 0.4435 S22: 0.1743 S23: -0.1982 REMARK 3 S31: -0.1862 S32: 0.2690 S33: 0.0276 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 133 B 279 REMARK 3 ORIGIN FOR THE GROUP (A): 37.2165 22.6595 4.7979 REMARK 3 T TENSOR REMARK 3 T11: -0.0993 T22: -0.1995 REMARK 3 T33: -0.0297 T12: 0.0193 REMARK 3 T13: 0.0444 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 1.5713 L22: 0.9272 REMARK 3 L33: 1.0204 L12: -0.0701 REMARK 3 L13: -0.2185 L23: -0.0078 REMARK 3 S TENSOR REMARK 3 S11: 0.0513 S12: -0.0975 S13: 0.4189 REMARK 3 S21: 0.1096 S22: 0.0035 S23: -0.0619 REMARK 3 S31: -0.2511 S32: -0.0205 S33: -0.0548 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 19 C 26 REMARK 3 ORIGIN FOR THE GROUP (A): -3.9682 16.3757 -16.9198 REMARK 3 T TENSOR REMARK 3 T11: 0.1284 T22: 0.2989 REMARK 3 T33: 0.2307 T12: 0.0531 REMARK 3 T13: -0.0266 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 6.0145 L22: 8.5721 REMARK 3 L33: 9.9918 L12: 6.6314 REMARK 3 L13: -4.7934 L23: -2.4960 REMARK 3 S TENSOR REMARK 3 S11: -0.0958 S12: -0.1054 S13: -0.0638 REMARK 3 S21: -0.0960 S22: -0.0217 S23: -0.0139 REMARK 3 S31: -0.0549 S32: -0.3656 S33: 0.1174 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 27 C 92 REMARK 3 ORIGIN FOR THE GROUP (A): 3.0105 17.0757 -6.3918 REMARK 3 T TENSOR REMARK 3 T11: -0.1374 T22: 0.1962 REMARK 3 T33: 0.1412 T12: 0.0778 REMARK 3 T13: -0.0253 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 2.2801 L22: 2.5766 REMARK 3 L33: 3.5315 L12: -0.1217 REMARK 3 L13: -0.2378 L23: 0.4351 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: -0.0517 S13: 0.1714 REMARK 3 S21: 0.0043 S22: -0.1414 S23: 0.6585 REMARK 3 S31: -0.0025 S32: -0.6603 S33: 0.0571 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 93 C 107 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7140 15.0434 17.2093 REMARK 3 T TENSOR REMARK 3 T11: 0.5038 T22: 0.5110 REMARK 3 T33: 0.4276 T12: 0.0500 REMARK 3 T13: 0.0215 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.1364 L22: 10.0065 REMARK 3 L33: 6.6251 L12: 1.1684 REMARK 3 L13: -0.9507 L23: -8.1421 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: -0.3063 S13: -0.0612 REMARK 3 S21: 0.8142 S22: -0.3156 S23: -0.3790 REMARK 3 S31: -0.5178 S32: 0.4835 S33: 0.3389 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 108 C 132 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7696 6.9787 9.5234 REMARK 3 T TENSOR REMARK 3 T11: -0.0892 T22: 0.0069 REMARK 3 T33: 0.0028 T12: -0.0067 REMARK 3 T13: 0.0303 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.0307 L22: 0.8016 REMARK 3 L33: 9.5732 L12: -0.2137 REMARK 3 L13: 0.7388 L23: -1.8851 REMARK 3 S TENSOR REMARK 3 S11: 0.0581 S12: -0.0536 S13: 0.0453 REMARK 3 S21: 0.0829 S22: 0.0946 S23: 0.2474 REMARK 3 S31: 0.2620 S32: -0.4453 S33: -0.1528 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 133 C 254 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8567 22.1672 -6.2712 REMARK 3 T TENSOR REMARK 3 T11: -0.1169 T22: -0.0691 REMARK 3 T33: 0.0149 T12: 0.1056 REMARK 3 T13: 0.0234 T23: 0.0628 REMARK 3 L TENSOR REMARK 3 L11: 0.8827 L22: 1.6130 REMARK 3 L33: 1.6730 L12: -0.0488 REMARK 3 L13: 0.3086 L23: 0.5605 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.0573 S13: 0.3326 REMARK 3 S21: -0.1269 S22: -0.0204 S23: 0.2468 REMARK 3 S31: -0.3052 S32: -0.3235 S33: -0.0167 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 255 C 282 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5456 0.5017 -17.6676 REMARK 3 T TENSOR REMARK 3 T11: -0.1114 T22: -0.0932 REMARK 3 T33: -0.1554 T12: 0.0360 REMARK 3 T13: -0.0140 T23: 0.0587 REMARK 3 L TENSOR REMARK 3 L11: 4.5916 L22: 4.5226 REMARK 3 L33: 4.5728 L12: 1.6949 REMARK 3 L13: 1.3059 L23: 2.6032 REMARK 3 S TENSOR REMARK 3 S11: -0.0384 S12: 0.3089 S13: -0.0207 REMARK 3 S21: -0.2566 S22: -0.0566 S23: 0.3827 REMARK 3 S31: 0.0905 S32: -0.3490 S33: 0.0950 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ADDITIONAL DENSITY IN THE TRIMER INTERFACE WAS REMARK 3 MODELLED AS A SET OF UNK ATOMS. REMARK 4 REMARK 4 2VRE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1290035830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58508 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 93.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DCI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CA(AC)2, 0.1M CACODYLATE PH 6.5, REMARK 280 18% PEG 8K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.06850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.06850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.79000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.62650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.79000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.62650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.06850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 63.79000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.62650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.06850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 63.79000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.62650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 38930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -189.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 VAL A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 THR A 15 REMARK 465 GLU A 16 REMARK 465 ASN A 17 REMARK 465 GLU A 290 REMARK 465 ASN A 291 REMARK 465 LYS A 292 REMARK 465 GLU A 293 REMARK 465 LEU A 294 REMARK 465 LYS A 295 REMARK 465 THR A 296 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 VAL B 11 REMARK 465 ASP B 12 REMARK 465 LEU B 13 REMARK 465 GLY B 14 REMARK 465 THR B 15 REMARK 465 GLU B 16 REMARK 465 ASN B 17 REMARK 465 LEU B 18 REMARK 465 TYR B 19 REMARK 465 PHE B 20 REMARK 465 GLN B 21 REMARK 465 SER B 22 REMARK 465 LYS B 283 REMARK 465 SER B 284 REMARK 465 VAL B 285 REMARK 465 GLN B 286 REMARK 465 ALA B 287 REMARK 465 THR B 288 REMARK 465 THR B 289 REMARK 465 GLU B 290 REMARK 465 ASN B 291 REMARK 465 LYS B 292 REMARK 465 GLU B 293 REMARK 465 LEU B 294 REMARK 465 LYS B 295 REMARK 465 THR B 296 REMARK 465 MET C 1 REMARK 465 HIS C 2 REMARK 465 HIS C 3 REMARK 465 HIS C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 SER C 8 REMARK 465 SER C 9 REMARK 465 GLY C 10 REMARK 465 VAL C 11 REMARK 465 ASP C 12 REMARK 465 LEU C 13 REMARK 465 GLY C 14 REMARK 465 THR C 15 REMARK 465 GLU C 16 REMARK 465 ASN C 17 REMARK 465 LEU C 18 REMARK 465 TYR C 19 REMARK 465 PHE C 20 REMARK 465 GLN C 21 REMARK 465 LYS C 283 REMARK 465 SER C 284 REMARK 465 VAL C 285 REMARK 465 GLN C 286 REMARK 465 ALA C 287 REMARK 465 THR C 288 REMARK 465 THR C 289 REMARK 465 GLU C 290 REMARK 465 ASN C 291 REMARK 465 LYS C 292 REMARK 465 GLU C 293 REMARK 465 LEU C 294 REMARK 465 LYS C 295 REMARK 465 THR C 296 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 39 CD CE NZ REMARK 470 MET A 97 CG SD CE REMARK 470 SER A 99 OG REMARK 470 ILE A 101 CG1 CG2 CD1 REMARK 470 LEU A 102 CG CD1 CD2 REMARK 470 GLN A 103 CG CD OE1 NE2 REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 ASP A 107 CG OD1 OD2 REMARK 470 GLN A 286 CG CD OE1 NE2 REMARK 470 THR A 288 OG1 CG2 REMARK 470 THR A 289 OG1 CG2 REMARK 470 ARG B 33 CZ NH1 NH2 REMARK 470 GLN B 38 CG CD OE1 NE2 REMARK 470 ARG B 72 NH1 NH2 REMARK 470 MET B 97 CG SD CE REMARK 470 SER B 99 OG REMARK 470 ILE B 101 CG1 CG2 CD1 REMARK 470 LEU B 102 CG CD1 CD2 REMARK 470 GLN B 103 CG CD OE1 NE2 REMARK 470 LYS B 105 CG CD CE NZ REMARK 470 ASP B 107 CG OD1 OD2 REMARK 470 GLN B 279 CG CD OE1 NE2 REMARK 470 VAL B 282 CG1 CG2 REMARK 470 MET C 23 CG SD CE REMARK 470 GLN C 38 CG CD OE1 NE2 REMARK 470 MET C 63 CE REMARK 470 LEU C 94 CG CD1 CD2 REMARK 470 MET C 97 CG SD CE REMARK 470 SER C 99 OG REMARK 470 ILE C 101 CG1 CG2 CD1 REMARK 470 LEU C 102 CG CD1 CD2 REMARK 470 GLN C 103 CG CD OE1 NE2 REMARK 470 LYS C 105 CG CD CE NZ REMARK 470 ASP C 107 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2104 O HOH B 2105 0.27 REMARK 500 O HOH A 2086 O HOH A 2087 0.48 REMARK 500 OE2 GLU A 131 O ALA A 155 1.34 REMARK 500 OD2 ASP A 157 CE2 PHE B 201 1.65 REMARK 500 CD PRO B 25 O HOH B 2002 1.65 REMARK 500 OE1 GLU A 131 O HOH A 2074 1.71 REMARK 500 NH2 ARG A 33 OE1 GLN A 45 1.79 REMARK 500 CD GLU A 131 O HOH A 2074 1.81 REMARK 500 OD1 ASP A 157 ND2 ASN B 197 1.92 REMARK 500 OE1 GLU C 198 O HOH C 2059 1.93 REMARK 500 O HOH B 2081 O HOH C 2053 2.00 REMARK 500 OD1 ASP A 229 O HOH A 2127 2.05 REMARK 500 O HOH A 2024 O HOH A 2025 2.10 REMARK 500 OH TYR A 255 O HOH A 2144 2.14 REMARK 500 OD1 ASP A 157 CB ASN B 197 2.16 REMARK 500 O HOH B 2016 O HOH B 2117 2.16 REMARK 500 OE2 GLU A 131 C ALA A 155 2.17 REMARK 500 OE1 GLU A 263 O HOH A 2155 2.18 REMARK 500 CB ASP C 280 O HOH A 2097 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CL CL A 1291 CL CL B 1284 4555 0.29 REMARK 500 O HOH A 2017 O HOH A 2017 3654 0.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 108 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 38 -159.78 128.25 REMARK 500 HIS A 40 -2.27 77.65 REMARK 500 ASP A 107 -81.36 -71.08 REMARK 500 ASP B 26 1.44 89.96 REMARK 500 HIS B 40 -4.45 73.35 REMARK 500 ASP B 107 -78.98 -74.75 REMARK 500 GLN B 277 59.48 -90.91 REMARK 500 ASP B 280 -8.44 -58.26 REMARK 500 ASP C 107 -84.28 -71.77 REMARK 500 GLN C 277 59.50 -97.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2011 DISTANCE = 6.32 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1290 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1284 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 1-23 FOR CHAINS A,B AND C ARE VECTOR DERIVED SEQUENCE, REMARK 999 CONTAINING THE EXPRESSION TAG. DBREF 2VRE A 1 23 PDB 2VRE 2VRE 1 23 DBREF 2VRE A 24 296 UNP Q13011 ECH1_HUMAN 50 322 DBREF 2VRE B 1 23 PDB 2VRE 2VRE 1 23 DBREF 2VRE B 24 296 UNP Q13011 ECH1_HUMAN 50 322 DBREF 2VRE C 1 23 PDB 2VRE 2VRE 1 23 DBREF 2VRE C 24 296 UNP Q13011 ECH1_HUMAN 50 322 SEQRES 1 A 296 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 296 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA PRO ASP SEQRES 3 A 296 HIS SER TYR GLU SER LEU ARG VAL THR SER ALA GLN LYS SEQRES 4 A 296 HIS VAL LEU HIS VAL GLN LEU ASN ARG PRO ASN LYS ARG SEQRES 5 A 296 ASN ALA MET ASN LYS VAL PHE TRP ARG GLU MET VAL GLU SEQRES 6 A 296 CYS PHE ASN LYS ILE SER ARG ASP ALA ASP CYS ARG ALA SEQRES 7 A 296 VAL VAL ILE SER GLY ALA GLY LYS MET PHE THR ALA GLY SEQRES 8 A 296 ILE ASP LEU MET ASP MET ALA SER ASP ILE LEU GLN PRO SEQRES 9 A 296 LYS GLY ASP ASP VAL ALA ARG ILE SER TRP TYR LEU ARG SEQRES 10 A 296 ASP ILE ILE THR ARG TYR GLN GLU THR PHE ASN VAL ILE SEQRES 11 A 296 GLU ARG CYS PRO LYS PRO VAL ILE ALA ALA VAL HIS GLY SEQRES 12 A 296 GLY CYS ILE GLY GLY GLY VAL ASP LEU VAL THR ALA CYS SEQRES 13 A 296 ASP ILE ARG TYR CYS ALA GLN ASP ALA PHE PHE GLN VAL SEQRES 14 A 296 LYS GLU VAL ASP VAL GLY LEU ALA ALA ASP VAL GLY THR SEQRES 15 A 296 LEU GLN ARG LEU PRO LYS VAL ILE GLY ASN GLN SER LEU SEQRES 16 A 296 VAL ASN GLU LEU ALA PHE THR ALA ARG LYS MET MET ALA SEQRES 17 A 296 ASP GLU ALA LEU GLY SER GLY LEU VAL SER ARG VAL PHE SEQRES 18 A 296 PRO ASP LYS GLU VAL MET LEU ASP ALA ALA LEU ALA LEU SEQRES 19 A 296 ALA ALA GLU ILE SER SER LYS SER PRO VAL ALA VAL GLN SEQRES 20 A 296 SER THR LYS VAL ASN LEU LEU TYR SER ARG ASP HIS SER SEQRES 21 A 296 VAL ALA GLU SER LEU ASN TYR VAL ALA SER TRP ASN MET SEQRES 22 A 296 SER MET LEU GLN THR GLN ASP LEU VAL LYS SER VAL GLN SEQRES 23 A 296 ALA THR THR GLU ASN LYS GLU LEU LYS THR SEQRES 1 B 296 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 296 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA PRO ASP SEQRES 3 B 296 HIS SER TYR GLU SER LEU ARG VAL THR SER ALA GLN LYS SEQRES 4 B 296 HIS VAL LEU HIS VAL GLN LEU ASN ARG PRO ASN LYS ARG SEQRES 5 B 296 ASN ALA MET ASN LYS VAL PHE TRP ARG GLU MET VAL GLU SEQRES 6 B 296 CYS PHE ASN LYS ILE SER ARG ASP ALA ASP CYS ARG ALA SEQRES 7 B 296 VAL VAL ILE SER GLY ALA GLY LYS MET PHE THR ALA GLY SEQRES 8 B 296 ILE ASP LEU MET ASP MET ALA SER ASP ILE LEU GLN PRO SEQRES 9 B 296 LYS GLY ASP ASP VAL ALA ARG ILE SER TRP TYR LEU ARG SEQRES 10 B 296 ASP ILE ILE THR ARG TYR GLN GLU THR PHE ASN VAL ILE SEQRES 11 B 296 GLU ARG CYS PRO LYS PRO VAL ILE ALA ALA VAL HIS GLY SEQRES 12 B 296 GLY CYS ILE GLY GLY GLY VAL ASP LEU VAL THR ALA CYS SEQRES 13 B 296 ASP ILE ARG TYR CYS ALA GLN ASP ALA PHE PHE GLN VAL SEQRES 14 B 296 LYS GLU VAL ASP VAL GLY LEU ALA ALA ASP VAL GLY THR SEQRES 15 B 296 LEU GLN ARG LEU PRO LYS VAL ILE GLY ASN GLN SER LEU SEQRES 16 B 296 VAL ASN GLU LEU ALA PHE THR ALA ARG LYS MET MET ALA SEQRES 17 B 296 ASP GLU ALA LEU GLY SER GLY LEU VAL SER ARG VAL PHE SEQRES 18 B 296 PRO ASP LYS GLU VAL MET LEU ASP ALA ALA LEU ALA LEU SEQRES 19 B 296 ALA ALA GLU ILE SER SER LYS SER PRO VAL ALA VAL GLN SEQRES 20 B 296 SER THR LYS VAL ASN LEU LEU TYR SER ARG ASP HIS SER SEQRES 21 B 296 VAL ALA GLU SER LEU ASN TYR VAL ALA SER TRP ASN MET SEQRES 22 B 296 SER MET LEU GLN THR GLN ASP LEU VAL LYS SER VAL GLN SEQRES 23 B 296 ALA THR THR GLU ASN LYS GLU LEU LYS THR SEQRES 1 C 296 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 296 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA PRO ASP SEQRES 3 C 296 HIS SER TYR GLU SER LEU ARG VAL THR SER ALA GLN LYS SEQRES 4 C 296 HIS VAL LEU HIS VAL GLN LEU ASN ARG PRO ASN LYS ARG SEQRES 5 C 296 ASN ALA MET ASN LYS VAL PHE TRP ARG GLU MET VAL GLU SEQRES 6 C 296 CYS PHE ASN LYS ILE SER ARG ASP ALA ASP CYS ARG ALA SEQRES 7 C 296 VAL VAL ILE SER GLY ALA GLY LYS MET PHE THR ALA GLY SEQRES 8 C 296 ILE ASP LEU MET ASP MET ALA SER ASP ILE LEU GLN PRO SEQRES 9 C 296 LYS GLY ASP ASP VAL ALA ARG ILE SER TRP TYR LEU ARG SEQRES 10 C 296 ASP ILE ILE THR ARG TYR GLN GLU THR PHE ASN VAL ILE SEQRES 11 C 296 GLU ARG CYS PRO LYS PRO VAL ILE ALA ALA VAL HIS GLY SEQRES 12 C 296 GLY CYS ILE GLY GLY GLY VAL ASP LEU VAL THR ALA CYS SEQRES 13 C 296 ASP ILE ARG TYR CYS ALA GLN ASP ALA PHE PHE GLN VAL SEQRES 14 C 296 LYS GLU VAL ASP VAL GLY LEU ALA ALA ASP VAL GLY THR SEQRES 15 C 296 LEU GLN ARG LEU PRO LYS VAL ILE GLY ASN GLN SER LEU SEQRES 16 C 296 VAL ASN GLU LEU ALA PHE THR ALA ARG LYS MET MET ALA SEQRES 17 C 296 ASP GLU ALA LEU GLY SER GLY LEU VAL SER ARG VAL PHE SEQRES 18 C 296 PRO ASP LYS GLU VAL MET LEU ASP ALA ALA LEU ALA LEU SEQRES 19 C 296 ALA ALA GLU ILE SER SER LYS SER PRO VAL ALA VAL GLN SEQRES 20 C 296 SER THR LYS VAL ASN LEU LEU TYR SER ARG ASP HIS SER SEQRES 21 C 296 VAL ALA GLU SER LEU ASN TYR VAL ALA SER TRP ASN MET SEQRES 22 C 296 SER MET LEU GLN THR GLN ASP LEU VAL LYS SER VAL GLN SEQRES 23 C 296 ALA THR THR GLU ASN LYS GLU LEU LYS THR HET CL A1290 1 HET CL A1291 1 HET CL B1283 1 HET CL B1284 1 HET CL C1283 1 HET CL C1284 1 HETNAM CL CHLORIDE ION FORMUL 4 CL 6(CL 1-) FORMUL 10 HOH *393(H2 O) HELIX 1 1 ARG A 48 ARG A 52 5 5 HELIX 2 2 ASN A 56 ARG A 72 1 17 HELIX 3 3 ASP A 93 GLN A 103 1 11 HELIX 4 4 ASP A 108 CYS A 133 1 26 HELIX 5 5 GLY A 147 THR A 154 1 8 HELIX 6 6 LYS A 170 VAL A 174 5 5 HELIX 7 7 GLY A 181 ILE A 190 1 10 HELIX 8 8 ASN A 192 ALA A 203 1 12 HELIX 9 9 ALA A 208 SER A 214 1 7 HELIX 10 10 ASP A 223 SER A 240 1 18 HELIX 11 11 SER A 242 HIS A 259 1 18 HELIX 12 12 SER A 260 LEU A 276 1 17 HELIX 13 13 THR A 278 THR A 288 1 11 HELIX 14 14 ARG B 48 ARG B 52 5 5 HELIX 15 15 ASN B 56 ASP B 73 1 18 HELIX 16 16 ASP B 93 GLN B 103 1 11 HELIX 17 17 ASP B 108 CYS B 133 1 26 HELIX 18 18 GLY B 147 ALA B 155 1 9 HELIX 19 19 LYS B 170 GLY B 175 5 6 HELIX 20 20 GLY B 181 ILE B 190 1 10 HELIX 21 21 ASN B 192 ALA B 203 1 12 HELIX 22 22 ALA B 208 SER B 214 1 7 HELIX 23 23 ASP B 223 SER B 240 1 18 HELIX 24 24 SER B 242 HIS B 259 1 18 HELIX 25 25 SER B 260 LEU B 276 1 17 HELIX 26 26 ARG C 48 ARG C 52 5 5 HELIX 27 27 ASN C 56 ARG C 72 1 17 HELIX 28 28 ASP C 93 GLN C 103 1 11 HELIX 29 29 ASP C 108 CYS C 133 1 26 HELIX 30 30 GLY C 147 ALA C 155 1 9 HELIX 31 31 LYS C 170 GLY C 175 1 6 HELIX 32 32 GLY C 181 ILE C 190 1 10 HELIX 33 33 ASN C 192 ALA C 203 1 12 HELIX 34 34 ALA C 208 SER C 214 1 7 HELIX 35 35 ASP C 223 SER C 240 1 18 HELIX 36 36 SER C 242 HIS C 259 1 18 HELIX 37 37 SER C 260 LEU C 276 1 17 SHEET 1 AA 6 LEU A 32 SER A 36 0 SHEET 2 AA 6 VAL A 41 LEU A 46 -1 O HIS A 43 N THR A 35 SHEET 3 AA 6 ALA A 78 GLY A 83 1 O ALA A 78 N LEU A 42 SHEET 4 AA 6 VAL A 137 VAL A 141 1 O ILE A 138 N ILE A 81 SHEET 5 AA 6 ILE A 158 ALA A 162 1 O ILE A 158 N ALA A 139 SHEET 6 AA 6 ARG A 219 PHE A 221 1 O ARG A 219 N CYS A 161 SHEET 1 AB 3 GLY A 144 ILE A 146 0 SHEET 2 AB 3 PHE A 166 GLN A 168 1 O PHE A 166 N CYS A 145 SHEET 3 AB 3 LYS A 205 MET A 207 -1 O MET A 206 N PHE A 167 SHEET 1 BA 6 LEU B 32 THR B 35 0 SHEET 2 BA 6 VAL B 41 LEU B 46 -1 O HIS B 43 N THR B 35 SHEET 3 BA 6 ALA B 78 GLY B 83 1 O ALA B 78 N LEU B 42 SHEET 4 BA 6 VAL B 137 VAL B 141 1 O ILE B 138 N ILE B 81 SHEET 5 BA 6 ILE B 158 ALA B 162 1 O ILE B 158 N ALA B 139 SHEET 6 BA 6 ARG B 219 PHE B 221 1 O ARG B 219 N CYS B 161 SHEET 1 BB 3 GLY B 144 ILE B 146 0 SHEET 2 BB 3 PHE B 166 GLN B 168 1 O PHE B 166 N CYS B 145 SHEET 3 BB 3 LYS B 205 MET B 207 -1 O MET B 206 N PHE B 167 SHEET 1 CA 6 LEU C 32 GLN C 38 0 SHEET 2 CA 6 VAL C 41 LEU C 46 -1 O VAL C 41 N ALA C 37 SHEET 3 CA 6 ALA C 78 GLY C 83 1 O ALA C 78 N LEU C 42 SHEET 4 CA 6 VAL C 137 VAL C 141 1 O ILE C 138 N ILE C 81 SHEET 5 CA 6 ILE C 158 ALA C 162 1 O ILE C 158 N ALA C 139 SHEET 6 CA 6 ARG C 219 PHE C 221 1 O ARG C 219 N CYS C 161 SHEET 1 CB 3 GLY C 144 ILE C 146 0 SHEET 2 CB 3 PHE C 166 GLN C 168 1 O PHE C 166 N CYS C 145 SHEET 3 CB 3 LYS C 205 MET C 207 -1 O MET C 206 N PHE C 167 SITE 1 AC1 1 ASN B 192 SITE 1 AC2 1 ASP B 179 SITE 1 AC3 1 ASN C 192 CRYST1 127.580 137.253 96.137 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007838 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007286 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010402 0.00000