PDB Short entry for 2VWF HEADER PROTEIN BINDING 24-JUN-08 2VWF TITLE GRB2 SH3C (2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN, RESIDUES 159-214; COMPND 5 SYNONYM: ADAPTER PROTEIN GRB2, SH2/SH3 ADAPTER GRB2, PROTEIN ASH, COMPND 6 GRB2 SH3C; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: N-TERMINAL GP- OVERHANG DUE TO INFUSION VECTOR USED; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: GRB2-ASSOCIATED-BINDING PROTEIN 2; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: SH3 BINDING REGION, RESIDUES 508-522; COMPND 14 SYNONYM: GROWTH FACTOR RECEPTOR BOUND PROTEIN 2-ASSOCIATED PROTEIN 2, COMPND 15 GRB2-ASSOCIATED BINDER 2, PP100, GAB2; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: OPIN J; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS POLYMORPHISM, PHOSPHOPROTEIN, GOLGI APPARATUS, GRB2, ALTERNATIVE KEYWDS 2 SPLICING, HOST-VIRUS INTERACTION, SH3C, SIGNALING, SH2 DOMAIN, SH3 KEYWDS 3 DOMAIN, PROTEIN-BINDING, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.HARKIOLAKI,T.TSIRKA,S.M.FELLER REVDAT 3 13-DEC-23 2VWF 1 REMARK REVDAT 2 23-JUN-09 2VWF 1 JRNL REVDAT 1 19-MAY-09 2VWF 0 JRNL AUTH M.HARKIOLAKI,T.TSIRKA,M.LEWITZKY,P.C.SIMISTER,D.JOSHI, JRNL AUTH 2 L.E.BIRD,E.Y.JONES,N.O'REILLY,S.M.FELLER JRNL TITL DISTINCT BINDING MODES OF TWO EPITOPES IN GAB2 THAT INTERACT JRNL TITL 2 WITH THE SH3C DOMAIN OF GRB2. JRNL REF STRUCTURE V. 17 809 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 19523899 JRNL DOI 10.1016/J.STR.2009.03.017 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 7645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 369 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 543 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 25 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 570 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.814 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 592 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 409 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 806 ; 1.597 ; 1.922 REMARK 3 BOND ANGLES OTHERS (DEGREES): 985 ; 0.967 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 70 ;17.584 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 35 ;32.739 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 86 ;13.171 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;13.963 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 78 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 674 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 129 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 94 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 411 ; 0.211 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 285 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 320 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 25 ; 0.118 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 36 ; 0.268 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.082 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 443 ; 1.294 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 570 ; 1.531 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 282 ; 2.361 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 235 ; 3.361 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VWF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1290036617. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8066 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 19.50 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.30 REMARK 200 R MERGE FOR SHELL (I) : 1.00000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2VVK REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 22.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M TRI-AMMONIUM CITRATE, 0.1M BIS-TRIS REMARK 280 PROPANE PH7, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.94333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.97167 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.95750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.98583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.92917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.94333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 35.97167 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 17.98583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.95750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 89.92917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 1370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2020 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, PRO 212 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 LYS B 15 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H46 RELATED DB: PDB REMARK 900 NATIVE DOMAIN-SWAPPED DIMER CRYSTAL STRUCTURE OF THE GRB2SH2 DOMAIN REMARK 900 RELATED ID: 1QG1 RELATED DB: PDB REMARK 900 GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN COMPLEXEDWITH AN REMARK 900 SHC-DERIVED PEPTIDE REMARK 900 RELATED ID: 1CJ1 RELATED DB: PDB REMARK 900 GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN (HUMAN)COMPLEXED REMARK 900 WITH A PHOSPHOTYROSYL DERIVATIVE REMARK 900 RELATED ID: 1BM2 RELATED DB: PDB REMARK 900 GRB2-SH2 DOMAIN IN COMPLEX WITH CYCLO-[N- ALPHA-ACETYL-L-THI ALYSYL- REMARK 900 O-PHOSPHOTYROSYL- VALYL-ASPARAGYL-VALYL-PROLYL] (PKF273-791) REMARK 900 RELATED ID: 1GFD RELATED DB: PDB REMARK 900 RELATED ID: 1FYR RELATED DB: PDB REMARK 900 DIMER FORMATION THROUGH DOMAIN SWAPPING IN THE CRYSTALSTRUCTURE OF REMARK 900 THE GRB2-SH2 AC- PYVNV COMPLEX REMARK 900 RELATED ID: 1JYU RELATED DB: PDB REMARK 900 XRAY STRUCTURE OF GRB2 SH2 DOMAIN REMARK 900 RELATED ID: 1BMB RELATED DB: PDB REMARK 900 GRB2-SH2 DOMAIN IN COMPLEX WITH KPFYVNVEF ( PKF270-974) REMARK 900 RELATED ID: 1JYQ RELATED DB: PDB REMARK 900 XRAY STRUCTURE OF GRB2 SH2 DOMAIN COMPLEXED WITH A HIGHLYAFFINE REMARK 900 PHOSPHO PEPTIDE REMARK 900 RELATED ID: 1GFC RELATED DB: PDB REMARK 900 RELATED ID: 2AOB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF A HIGH-AFFINITY MACROCYCLIC PEPTIDEMIMETIC IN REMARK 900 COMPLEX WITH THE GRB2 SH2 DOMAIN REMARK 900 RELATED ID: 1X0N RELATED DB: PDB REMARK 900 NMR STRUCTURE OF GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2DOMAIN REMARK 900 COMPLEXED WITH THE INHIBITOR REMARK 900 RELATED ID: 1TZE RELATED DB: PDB REMARK 900 SIGNAL TRANSDUCTION ADAPTOR GROWTH FACTOR, GRB2 SH2 DOMAIN REMARK 900 COMPLEXED WITH PHOSPHOTYROSYL HEPTAPEPTIDE LYS-PRO-PHE-PTYR-VAL-ASN- REMARK 900 VAL-NH2 (KFPPYVNC-NH2) REMARK 900 RELATED ID: 1AZE RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE COMPLEX BETWEEN THE C32S-Y7V MUTANT OF THE REMARK 900 NSH3 DOMAIN OF GRB2 WITH A PEPTIDE FROM SOS, 10 STRUCTURES REMARK 900 RELATED ID: 1GRI RELATED DB: PDB REMARK 900 GRB2 REMARK 900 RELATED ID: 2VVK RELATED DB: PDB REMARK 900 GRB2 SH3C (1) REMARK 900 RELATED ID: 1IO6 RELATED DB: PDB REMARK 900 GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (GRB2 ) C-TERMINALSH3 DOMAIN REMARK 900 COMPLEXED WITH A LIGAND PEPTIDE (NMR, MINIMIZEDMEAN STRUCTURE) REMARK 900 RELATED ID: 1FHS RELATED DB: PDB REMARK 900 THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE SRCHOMOLOGY DOMAIN- REMARK 900 2 OF THE GROWTH FACTOR RECEPTOR BOUNDPROTEIN-2, NMR, 18 STRUCTURES REMARK 900 RELATED ID: 1ZFP RELATED DB: PDB REMARK 900 GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN COMPLEXEDWITH A REMARK 900 PHOSPHOTYROSYL PENTAPEPTIDE REMARK 900 RELATED ID: 1GCQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF VAV AND GRB2 SH3 DOMAINS REMARK 900 RELATED ID: 1GHU RELATED DB: PDB REMARK 900 NMR SOLUTION STRUCTURE OF GROWTH FACTOR RECEPTOR-BOUNDPROTEIN 2 REMARK 900 (GRB2) SH2 DOMAIN, 24 STRUCTURES REMARK 900 RELATED ID: 2AOA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF A HIGH-AFFINITY MACROCYCLIC PEPTIDEMIMETIC IN REMARK 900 COMPLEX WITH THE GRB2 SH2 DOMAIN REMARK 900 RELATED ID: 1JYR RELATED DB: PDB REMARK 900 XRAY STRUCTURE OF GRB2 SH2 DOMAIN COMPLEXED WITH APHOSPHORYLATED REMARK 900 PEPTIDE REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL GP SEQUENCE IS DUE TO THE VECTOR USED. DBREF 2VWF A -1 0 PDB 2VWF 2VWF -1 0 DBREF 2VWF A 1 56 UNP P62993 GRB2_HUMAN 159 214 DBREF 2VWF B 1 15 UNP Q9UQC2 GAB2_HUMAN 508 522 SEQADV 2VWF ALA A 54 UNP P62993 PRO 212 ENGINEERED MUTATION SEQRES 1 A 58 GLY PRO THR TYR VAL GLN ALA LEU PHE ASP PHE ASP PRO SEQRES 2 A 58 GLN GLU ASP GLY GLU LEU GLY PHE ARG ARG GLY ASP PHE SEQRES 3 A 58 ILE HIS VAL MET ASP ASN SER ASP PRO ASN TRP TRP LYS SEQRES 4 A 58 GLY ALA CYS HIS GLY GLN THR GLY MET PHE PRO ARG ASN SEQRES 5 A 58 TYR VAL THR ALA VAL ASN SEQRES 1 B 15 ILE GLN PRO PRO PRO VAL ASN ARG ASN LEU LYS PRO ASP SEQRES 2 B 15 ARG LYS FORMUL 3 HOH *42(H2 O) HELIX 1 1 ASN B 7 LYS B 11 5 5 SHEET 1 AA 5 GLN A 43 PRO A 48 0 SHEET 2 AA 5 TRP A 35 CYS A 40 -1 O TRP A 36 N PHE A 47 SHEET 3 AA 5 PHE A 24 ASP A 29 -1 O HIS A 26 N ALA A 39 SHEET 4 AA 5 TYR A 2 ALA A 5 -1 O VAL A 3 N ILE A 25 SHEET 5 AA 5 VAL A 52 ALA A 54 -1 O THR A 53 N GLN A 4 CRYST1 41.166 41.166 107.915 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024292 0.014025 0.000000 0.00000 SCALE2 0.000000 0.028050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009267 0.00000