PDB Short entry for 2W2R HEADER VIRAL PROTEIN 03-NOV-08 2W2R TITLE STRUCTURE OF THE VESICULAR STOMATITIS VIRUS MATRIX PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATRIX PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: VESICULAR STOMATITS VIRUS MATRIX PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VESICULAR STOMATITIS VIRUS; SOURCE 3 ORGANISM_TAXID: 11276; SOURCE 4 STRAIN: NEW JERSEY; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: POPINS KEYWDS VIRAL ASSEMBLY, VIRAL MORPHOGENESIS, VSV, POLYMER, VIRAL PROTEIN, KEYWDS 2 MATRIX PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.C.GRAHAM,R.ASSENBERG,O.DELMAS,A.VERMA,A.GHOLAMI,C.TALBI,R.J.OWENS, AUTHOR 2 D.I.STUART,J.M.GRIMES,H.BOURHY REVDAT 2 08-MAY-19 2W2R 1 REMARK LINK REVDAT 1 13-JAN-09 2W2R 0 JRNL AUTH S.C.GRAHAM,R.ASSENBERG,O.DELMAS,A.VERMA,A.GHOLAMI,C.TALBI, JRNL AUTH 2 R.J.OWENS,D.I.STUART,J.M.GRIMES,H.BOURHY JRNL TITL RHABDOVIRUS MATRIX PROTEIN STRUCTURES REVEAL A NOVEL MODE OF JRNL TITL 2 SELF-ASSOCIATION. JRNL REF PLOS PATHOG. V. 4 251 2008 JRNL REFN ISSN 1553-7366 JRNL PMID 19112510 JRNL DOI 10.1371/JOURNAL.PPAT.1000251 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0077 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1130 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1603 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1483 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 147 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.092 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.440 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1551 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1077 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2105 ; 1.249 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2618 ; 1.598 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 190 ; 5.825 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 71 ;34.568 ;23.380 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 265 ;12.082 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;11.645 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 225 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1712 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 338 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 931 ; 2.073 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1511 ; 3.575 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 620 ; 4.445 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 590 ; 6.690 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 52 REMARK 3 ORIGIN FOR THE GROUP (A): -16.7273 -38.3869 -14.2914 REMARK 3 T TENSOR REMARK 3 T11: 0.1930 T22: 0.0185 REMARK 3 T33: 0.1538 T12: -0.0552 REMARK 3 T13: -0.0809 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 12.9521 L22: 4.6745 REMARK 3 L33: 1.1352 L12: 6.1932 REMARK 3 L13: 1.0819 L23: -0.8205 REMARK 3 S TENSOR REMARK 3 S11: 0.1514 S12: -0.5557 S13: -0.5724 REMARK 3 S21: -0.4353 S22: 0.0767 S23: -0.2665 REMARK 3 S31: 0.0081 S32: -0.1484 S33: -0.2281 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 58 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): -15.2817 -18.1510 -9.0322 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.1141 REMARK 3 T33: 0.1384 T12: -0.0134 REMARK 3 T13: -0.0150 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.2548 L22: 0.5872 REMARK 3 L33: 0.7420 L12: -0.1923 REMARK 3 L13: 0.0313 L23: 0.5367 REMARK 3 S TENSOR REMARK 3 S11: 0.0319 S12: 0.0035 S13: -0.0246 REMARK 3 S21: 0.0182 S22: 0.0195 S23: 0.0391 REMARK 3 S31: 0.0276 S32: 0.0005 S33: -0.0514 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2W2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1290037973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9802 REMARK 200 MONOCHROMATOR : SI (111) CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22813 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 35.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SITTING DROPS CONTAINING 100 NL 1.2 REMARK 280 MG/ML PROTEIN AND 100 NL OF RESERVOIR SOLUTION (20% V/V REMARK 280 ISOPROPANOL, 20% W/V PEG 4000 AND 0.1 M SODIUM CITRATE (PH 5.6)) REMARK 280 WERE EQUILIBRATED AGAINST 95 UL RESERVIOURS AT 20.5C. CRYSTALS REMARK 280 WERE CRYOPROTECTED BY A QUICK SWEEP THROUGH RESERVOIR REMARK 280 SUPPLEMENTED WITH 20% V/V GLYCEROL., VAPOR DIFFUSION, SITTING REMARK 280 DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.13000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.13000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.16000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.13000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.13000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.16000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 43.13000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 43.13000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 35.16000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 43.13000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 43.13000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 35.16000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE PROTEIN IS A NON-COVALENT LINEAR POLYMER WHERE GLOBULAR REMARK 300 DOMAINS (RESIDUES ARE 58-229) ARE NON-COVALENTLY ASSOCIATED REMARK 300 BY A FLEXIBLE LINKER, WITH RESIDUES 41-52 MEDIATING THE REMARK 300 INTER-MOLECULAR INTERACTION. REMARK 300 REMARK 300 RESIDUES 41-52, WHICH INTERACT WITH THE GLOBULAR DOMAIN REMARK 300 (RESIDUES 58-229) IN THE LOOPS BETWEEN BETA SHEET 1 TO REMARK 300 ALPHA HELIX 1, ALPHA HELIX 2 TO ALPHA HELIX 2.5 AND THE REMARK 300 LOOP PRECEDING ALPHA HELIX 3, ARE NOT COVALENTLY LINKED REMARK 300 TO THIS GLOBULAR DOMAIN. RATHER, THEY ARE COVALENTLY REMARK 300 LINKED TO AN ADJACENT GLOBULAR DOMAIN IN THE CRYSTAL REMARK 300 RELATED BY THE SYMMETRY OPERATOR REMARK 300 [-X-1/2,-Y-1/2,Z-1/2]. REPEATED, THIS INTER-MOLECULAR REMARK 300 INTERACTION GIVES RISE TO LINEAR POLYMERS OF THE M REMARK 300 PROTEIN WHERE MOLECULES ARE NON-COVALENTLY LINKED VIA THE REMARK 300 INTERACTION BETWEEN RESIDUES 41-52 AND THE GLOBULAR REMARK 300 DOMAIN. REMARK 300 REMARK 300 IN ORDER TO GENERATE THE LINEAR POLYMER THE FOLLOWING REMARK 300 TRANSFORMATION MATRIX SHOULD BE APPLIED: REMARK 300 REMARK 300 RX RY RZ T REMARK 300 -1.0000 0.0000 0.0000 -43.1300 REMARK 300 -0.0000 -1.0000 -0.0000 -43.1300 REMARK 300 -0.0000 -0.0000 1.0000 -35.1600 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 PHE A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 ILE A 7 REMARK 465 LEU A 8 REMARK 465 GLY A 9 REMARK 465 LEU A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 LYS A 13 REMARK 465 SER A 14 REMARK 465 HIS A 15 REMARK 465 LYS A 16 REMARK 465 LYS A 17 REMARK 465 SER A 18 REMARK 465 LYS A 19 REMARK 465 LYS A 20 REMARK 465 MSE A 21 REMARK 465 GLY A 22 REMARK 465 LEU A 23 REMARK 465 PRO A 24 REMARK 465 PRO A 25 REMARK 465 PRO A 26 REMARK 465 TYR A 27 REMARK 465 ASP A 28 REMARK 465 GLU A 29 REMARK 465 SER A 30 REMARK 465 SER A 31 REMARK 465 PRO A 32 REMARK 465 MSE A 33 REMARK 465 GLU A 34 REMARK 465 THR A 35 REMARK 465 GLN A 36 REMARK 465 PRO A 37 REMARK 465 SER A 38 REMARK 465 ALA A 39 REMARK 465 PRO A 40 REMARK 465 LEU A 53 REMARK 465 TYR A 54 REMARK 465 ASP A 55 REMARK 465 LYS A 56 REMARK 465 ASP A 57 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 74 OG REMARK 470 ASN A 127 CG OD1 ND2 REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 470 LYS A 185 CD CE NZ REMARK 470 LYS A 215 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 42 -9.08 -58.38 REMARK 500 MSE A 51 -74.37 -46.80 REMARK 500 GLN A 128 51.29 -118.95 REMARK 500 GLN A 128 52.27 -119.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2014 DISTANCE = 6.30 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2W2S RELATED DB: PDB REMARK 900 STRUCTURE OF THE LAGOS BAT VIRUS MATRIX PROTEIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THE PROTEIN WAS DERIVED FROM GENBANK ENTRY REMARK 999 EU917223 WHICH WAS UNRELEASED AT THE TIME OF PROCESSING. DBREF 2W2R A 2 229 PDB 2W2R 2W2R 2 229 SEQRES 1 A 228 SER SER PHE LYS LYS ILE LEU GLY LEU SER SER LYS SER SEQRES 2 A 228 HIS LYS LYS SER LYS LYS MSE GLY LEU PRO PRO PRO TYR SEQRES 3 A 228 ASP GLU SER SER PRO MSE GLU THR GLN PRO SER ALA PRO SEQRES 4 A 228 LEU SER ASN ASP PHE PHE GLY MSE GLU ASP MSE ASP LEU SEQRES 5 A 228 TYR ASP LYS ASP SER LEU ARG TYR GLU LYS PHE ARG PHE SEQRES 6 A 228 MSE LEU LYS MSE THR VAL ARG SER ASN LYS PRO PHE ARG SEQRES 7 A 228 SER TYR ASP ASP VAL THR ALA ALA VAL SER GLN TRP ASP SEQRES 8 A 228 ASN SER TYR ILE GLY MSE VAL GLY LYS ARG PRO PHE TYR SEQRES 9 A 228 LYS ILE ILE ALA LEU ILE GLY SER SER HIS LEU GLN ALA SEQRES 10 A 228 THR PRO ALA VAL LEU ALA ASP LEU ASN GLN PRO GLU TYR SEQRES 11 A 228 TYR ALA THR LEU THR GLY ARG CYS PHE LEU PRO HIS ARG SEQRES 12 A 228 LEU GLY LEU ILE PRO PRO MSE PHE ASN VAL SER GLU THR SEQRES 13 A 228 PHE ARG LYS PRO PHE ASN ILE GLY ILE TYR LYS GLY THR SEQRES 14 A 228 LEU ASP PHE THR PHE THR VAL SER ASP ASP GLU SER ASN SEQRES 15 A 228 GLU LYS VAL PRO HIS VAL TRP GLU TYR MSE ASN PRO LYS SEQRES 16 A 228 TYR GLN SER GLN ILE GLN LYS GLU GLY LEU LYS PHE GLY SEQRES 17 A 228 LEU ILE LEU SER LYS LYS ALA THR GLY THR TRP VAL LEU SEQRES 18 A 228 ASP GLN LEU SER PRO PHE LYS MODRES 2W2R MSE A 48 MET SELENOMETHIONINE MODRES 2W2R MSE A 51 MET SELENOMETHIONINE MODRES 2W2R MSE A 67 MET SELENOMETHIONINE MODRES 2W2R MSE A 70 MET SELENOMETHIONINE MODRES 2W2R MSE A 98 MET SELENOMETHIONINE MODRES 2W2R MSE A 151 MET SELENOMETHIONINE MODRES 2W2R MSE A 193 MET SELENOMETHIONINE HET MSE A 48 8 HET MSE A 51 8 HET MSE A 67 13 HET MSE A 70 8 HET MSE A 98 8 HET MSE A 151 8 HET MSE A 193 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 HOH *147(H2 O) HELIX 1 1 SER A 80 SER A 89 1 10 HELIX 2 2 GLN A 90 ASN A 93 5 4 HELIX 3 3 MSE A 98 GLY A 100 5 3 HELIX 4 4 LYS A 101 SER A 114 1 14 HELIX 5 5 PRO A 120 ASP A 125 1 6 HELIX 6 6 VAL A 189 MSE A 193 5 5 HELIX 7 7 ASN A 194 SER A 199 5 6 HELIX 8 8 GLN A 200 PHE A 208 1 9 SHEET 1 AA 5 GLN A 117 ALA A 118 0 SHEET 2 AA 5 GLU A 130 HIS A 143 -1 O TYR A 132 N GLN A 117 SHEET 3 AA 5 ARG A 60 SER A 74 -1 O ARG A 60 N HIS A 143 SHEET 4 AA 5 LYS A 168 ASP A 179 -1 O THR A 170 N ARG A 73 SHEET 5 AA 5 GLU A 156 ASN A 163 -1 O GLU A 156 N PHE A 175 SHEET 1 AB 2 LEU A 210 SER A 213 0 SHEET 2 AB 2 VAL A 221 LEU A 225 -1 O VAL A 221 N SER A 213 LINK C GLY A 47 N MSE A 48 1555 1555 1.32 LINK C MSE A 48 N GLU A 49 1555 1555 1.32 LINK C ASP A 50 N MSE A 51 1555 1555 1.32 LINK C MSE A 51 N ASP A 52 1555 1555 1.33 LINK C PHE A 66 N MSE A 67 1555 1555 1.32 LINK C MSE A 67 N LEU A 68 1555 1555 1.31 LINK C LYS A 69 N MSE A 70 1555 1555 1.32 LINK C MSE A 70 N THR A 71 1555 1555 1.32 LINK C GLY A 97 N MSE A 98 1555 1555 1.32 LINK C MSE A 98 N VAL A 99 1555 1555 1.33 LINK C PRO A 150 N MSE A 151 1555 1555 1.32 LINK C MSE A 151 N PHE A 152 1555 1555 1.33 LINK C TYR A 192 N MSE A 193 1555 1555 1.32 LINK C MSE A 193 N ASN A 194 1555 1555 1.32 CRYST1 86.260 86.260 70.320 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011593 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014221 0.00000