PDB Short entry for 2WU7 HEADER TRANSFERASE 30-SEP-09 2WU7 TITLE CRYSTAL STRUCTURE OF THE HUMAN CLK3 IN COMPLEX WITH V25 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PROTEIN KINASE CLK3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 127-484; COMPND 5 SYNONYM: CDC-LIKE KINASE 3, CDC-LIKE KINASE 3 ISOFORM COMPND 6 HCLK3; COMPND 7 EC: 2.7.12.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: MUSCLE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3 KEYWDS TRANSFERASE, KINASE, TYROSINE-PROTEIN KINASE, KEYWDS 2 SERINE/THREONINE-PROTEIN KINASE, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.MUNIZ,O.FEDOROV,O.KING,P.FILIPPAKOPOULOS,A.N.BULLOCK, AUTHOR 2 C.PHILLIPS,T.HEIGHTMAN,E.UGOCHUKWU,F.VON DELFT, AUTHOR 3 C.H.ARROWSMITH,F.BRACHER,K.HUBER,A.M.EDWARDS,J.WEIGELT, AUTHOR 4 C.BOUNTRA,S.KNAPP REVDAT 3 07-DEC-11 2WU7 1 AUTHOR JRNL REMARK ATOM REVDAT 3 2 ANISOU HETATM MASTER VERSN REVDAT 2 02-FEB-10 2WU7 1 KEYWDS REMARK REVDAT 1 20-OCT-09 2WU7 0 JRNL AUTH O.FEDOROV,K.HUBER,A.EISENREICH,P.FILIPPAKOPOULOS,O.KING, JRNL AUTH 2 A.N.BULLOCK,D.SZKLARCZYK,L.J.JENSEN,D.FABBRO,J.TRAPPE, JRNL AUTH 3 U.RAUCH,F.BRACHER,S.KNAPP JRNL TITL SPECIFIC CLK INHIBITORS FROM A NOVEL CHEMOTYPE FOR JRNL TITL 2 REGULATION OF ALTERNATIVE SPLICING. JRNL REF CHEM.BIOL V. 18 67 2011 JRNL REFN ISSN 1074-5521 JRNL PMID 21276940 JRNL DOI 10.1016/J.CHEMBIOL.2010.11.009 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 19231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.1934 REMARK 3 R VALUE (WORKING SET) : 0.1904 REMARK 3 FREE R VALUE : 0.2456 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.38 REMARK 3 FREE R VALUE TEST SET COUNT : 1034 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2788 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2135 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2655 REMARK 3 BIN R VALUE (WORKING SET) : 0.2103 REMARK 3 BIN FREE R VALUE : 0.2799 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.77 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 133 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2834 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.1476 REMARK 3 B22 (A**2) : 1.9276 REMARK 3 B33 (A**2) : -0.7800 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : -4.1909 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.272 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.9183 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.8632 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2953 ; 2.00 ; HARMONIC REMARK 3 BOND ANGLES : 4001 ; 2.00 ; HARMONIC REMARK 3 TORSION ANGLES : 1011 ; 2.00 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 79 ; 2.00 ; HARMONIC REMARK 3 GENERAL PLANES : 435 ; 5.00 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2953 ; 20.00 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.00 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 363 ; 5.00 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3596 ; 4.00 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.96 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.21 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 135-196 REMARK 3 ORIGIN FOR THE GROUP (A): 47.0478 16.2032 16.9894 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: -0.0130 REMARK 3 T33: -0.0152 T12: -0.0136 REMARK 3 T13: -0.0023 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.5377 L22: 0.3006 REMARK 3 L33: 2.6512 L12: -0.4594 REMARK 3 L13: 0.6852 L23: 0.3089 REMARK 3 S TENSOR REMARK 3 S11: 0.0163 S12: -0.0522 S13: -0.0335 REMARK 3 S21: 0.1483 S22: 0.0562 S23: -0.0425 REMARK 3 S31: -0.2325 S32: 0.1244 S33: -0.0726 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 197-378 REMARK 3 ORIGIN FOR THE GROUP (A): 26.1617 10.3907 18.0682 REMARK 3 T TENSOR REMARK 3 T11: -0.0035 T22: -0.0421 REMARK 3 T33: -0.0735 T12: 0.0060 REMARK 3 T13: -0.0055 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.5251 L22: 0.0000 REMARK 3 L33: 0.1421 L12: 0.2714 REMARK 3 L13: -0.4668 L23: 0.2031 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.1130 S13: -0.0123 REMARK 3 S21: -0.0320 S22: -0.0423 S23: -0.0257 REMARK 3 S31: 0.0209 S32: -0.0348 S33: 0.0262 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESSEQ 379-482 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6165 8.2505 28.6172 REMARK 3 T TENSOR REMARK 3 T11: -0.0276 T22: -0.0618 REMARK 3 T33: -0.0833 T12: -0.0197 REMARK 3 T13: -0.0014 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.5337 L22: 0.9005 REMARK 3 L33: 0.2578 L12: -0.1251 REMARK 3 L13: -0.5932 L23: 0.2055 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: 0.1019 S13: -0.0101 REMARK 3 S21: 0.0310 S22: -0.0449 S23: 0.1557 REMARK 3 S31: 0.1396 S32: -0.2014 S33: 0.0519 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WU7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-OCT-09. REMARK 100 THE PDBE ID CODE IS EBI-41300. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : BRUKER REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SADABS REMARK 200 DATA SCALING SOFTWARE : SAINT REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19231 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.24 REMARK 200 RESOLUTION RANGE LOW (A) : 37.32 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.12 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.59 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.26 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.42 REMARK 200 R MERGE FOR SHELL (I) : 0.58 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.12 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M (NH4)2SO4, 0.1M BIS-TRIS REMARK 280 PH 5.5, 25% PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.93500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.93500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 465 HIS A 108 REMARK 465 HIS A 109 REMARK 465 HIS A 110 REMARK 465 SER A 111 REMARK 465 SER A 112 REMARK 465 GLY A 113 REMARK 465 VAL A 114 REMARK 465 ASP A 115 REMARK 465 LEU A 116 REMARK 465 GLY A 117 REMARK 465 THR A 118 REMARK 465 GLU A 119 REMARK 465 ASN A 120 REMARK 465 LEU A 121 REMARK 465 TYR A 122 REMARK 465 PHE A 123 REMARK 465 GLN A 124 REMARK 465 SER A 125 REMARK 465 MET A 126 REMARK 465 GLN A 127 REMARK 465 SER A 128 REMARK 465 SER A 129 REMARK 465 LYS A 130 REMARK 465 ARG A 131 REMARK 465 SER A 132 REMARK 465 SER A 133 REMARK 465 ARG A 134 REMARK 465 HIS A 483 REMARK 465 THR A 484 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 LYS A 193 CG CD CE NZ REMARK 470 LYS A 209 CD CE NZ REMARK 470 GLU A 210 CD OE1 OE2 REMARK 470 LYS A 211 CD CE NZ REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 ASN A 215 CG OD1 ND2 REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 GLN A 278 CD OE1 NE2 REMARK 470 GLU A 297 CG CD OE1 OE2 REMARK 470 HIS A 328 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 377 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 403 CE NZ REMARK 470 LYS A 409 CG CD CE NZ REMARK 470 GLU A 478 CD OE1 OE2 REMARK 470 ARG A 480 NH2 REMARK 470 SER A 481 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 155 -54.62 -132.70 REMARK 500 PHE A 217 31.60 -99.94 REMARK 500 THR A 282 -17.46 78.68 REMARK 500 ASP A 320 79.06 62.02 REMARK 500 ALA A 336 152.38 73.64 REMARK 500 ALA A 352 -143.49 -149.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 PHE A 217 24.2 L L OUTSIDE RANGE REMARK 500 ARG A 338 23.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE V25 A1483 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1484 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1485 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1486 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1487 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1488 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1489 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1490 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2EU9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CLK3 REMARK 900 RELATED ID: 2WU6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN CLK3 IN REMARK 900 COMPLEX WITH DKI REMARK 900 RELATED ID: 2EXE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PHOSPHORYLATED CLK3 DBREF 2WU7 A 104 126 PDB 2WU7 2WU7 104 126 DBREF 2WU7 A 127 484 UNP P49761 CLK3_HUMAN 127 484 SEQRES 1 A 381 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 381 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLN SER SER SEQRES 3 A 381 LYS ARG SER SER ARG SER VAL GLU ASP ASP LYS GLU GLY SEQRES 4 A 381 HIS LEU VAL CYS ARG ILE GLY ASP TRP LEU GLN GLU ARG SEQRES 5 A 381 TYR GLU ILE VAL GLY ASN LEU GLY GLU GLY THR PHE GLY SEQRES 6 A 381 LYS VAL VAL GLU CYS LEU ASP HIS ALA ARG GLY LYS SER SEQRES 7 A 381 GLN VAL ALA LEU LYS ILE ILE ARG ASN VAL GLY LYS TYR SEQRES 8 A 381 ARG GLU ALA ALA ARG LEU GLU ILE ASN VAL LEU LYS LYS SEQRES 9 A 381 ILE LYS GLU LYS ASP LYS GLU ASN LYS PHE LEU CYS VAL SEQRES 10 A 381 LEU MET SER ASP TRP PHE ASN PHE HIS GLY HIS MET CYS SEQRES 11 A 381 ILE ALA PHE GLU LEU LEU GLY LYS ASN THR PHE GLU PHE SEQRES 12 A 381 LEU LYS GLU ASN ASN PHE GLN PRO TYR PRO LEU PRO HIS SEQRES 13 A 381 VAL ARG HIS MET ALA TYR GLN LEU CYS HIS ALA LEU ARG SEQRES 14 A 381 PHE LEU HIS GLU ASN GLN LEU THR HIS THR ASP LEU LYS SEQRES 15 A 381 PRO GLU ASN ILE LEU PHE VAL ASN SER GLU PHE GLU THR SEQRES 16 A 381 LEU TYR ASN GLU HIS LYS SER CYS GLU GLU LYS SER VAL SEQRES 17 A 381 LYS ASN THR SER ILE ARG VAL ALA ASP PHE GLY SER ALA SEQRES 18 A 381 THR PHE ASP HIS GLU HIS HIS THR THR ILE VAL ALA THR SEQRES 19 A 381 ARG HIS TYR ARG PRO PRO GLU VAL ILE LEU GLU LEU GLY SEQRES 20 A 381 TRP ALA GLN PRO CYS ASP VAL TRP SER ILE GLY CYS ILE SEQRES 21 A 381 LEU PHE GLU TYR TYR ARG GLY PHE THR LEU PHE GLN THR SEQRES 22 A 381 HIS GLU ASN ARG GLU HIS LEU VAL MET MET GLU LYS ILE SEQRES 23 A 381 LEU GLY PRO ILE PRO SER HIS MET ILE HIS ARG THR ARG SEQRES 24 A 381 LYS GLN LYS TYR PHE TYR LYS GLY GLY LEU VAL TRP ASP SEQRES 25 A 381 GLU ASN SER SER ASP GLY ARG TYR VAL LYS GLU ASN CYS SEQRES 26 A 381 LYS PRO LEU LYS SER TYR MET LEU GLN ASP SER LEU GLU SEQRES 27 A 381 HIS VAL GLN LEU PHE ASP LEU MET ARG ARG MET LEU GLU SEQRES 28 A 381 PHE ASP PRO ALA GLN ARG ILE THR LEU ALA GLU ALA LEU SEQRES 29 A 381 LEU HIS PRO PHE PHE ALA GLY LEU THR PRO GLU GLU ARG SEQRES 30 A 381 SER PHE HIS THR HET V25 A1483 22 HET SO4 A1484 5 HET SO4 A1485 5 HET SO4 A1486 5 HET SO4 A1487 5 HET SO4 A1488 5 HET CL A1489 1 HET CL A1490 1 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM V25 ETHYL 3-[(E)-2-AMINO-1-CYANOETHENYL]-6,7- HETNAM 2 V25 DICHLORO-1-METHYL-1H-INDOLE-2-CARBOXYLATE FORMUL 2 SO4 5(O4 S 2-) FORMUL 3 CL 2(CL 1-) FORMUL 4 V25 C15 H13 CL2 N3 O2 FORMUL 5 HOH *164(H2 O) HELIX 1 1 LYS A 193 ASP A 212 1 20 HELIX 2 2 ASN A 242 ASN A 250 1 9 HELIX 3 3 PRO A 256 ASN A 277 1 22 HELIX 4 4 LYS A 285 GLU A 287 5 3 HELIX 5 5 THR A 337 ARG A 341 5 5 HELIX 6 6 PRO A 342 LEU A 347 1 6 HELIX 7 7 GLN A 353 ILE A 360 1 8 HELIX 8 8 CYS A 362 ARG A 369 1 8 HELIX 9 9 GLU A 378 LEU A 390 1 13 HELIX 10 10 PRO A 394 THR A 401 1 8 HELIX 11 11 LYS A 403 PHE A 407 5 5 HELIX 12 12 ARG A 422 CYS A 428 1 7 HELIX 13 13 PRO A 430 MET A 435 5 6 HELIX 14 14 SER A 439 LEU A 453 1 15 HELIX 15 15 THR A 462 LEU A 467 1 6 HELIX 16 16 LEU A 468 ALA A 473 5 6 HELIX 17 17 THR A 476 PHE A 482 1 7 SHEET 1 AA 6 TRP A 151 LEU A 152 0 SHEET 2 AA 6 TYR A 156 ILE A 158 -1 O TYR A 156 N LEU A 152 SHEET 3 AA 6 VAL A 170 ASP A 175 -1 O LEU A 174 N GLU A 157 SHEET 4 AA 6 SER A 181 ILE A 187 -1 O SER A 181 N ASP A 175 SHEET 5 AA 6 MET A 232 GLU A 237 -1 O ILE A 234 N LYS A 186 SHEET 6 AA 6 MET A 222 ASN A 227 -1 N SER A 223 O ALA A 235 SHEET 1 AB 2 LEU A 279 THR A 280 0 SHEET 2 AB 2 THR A 325 PHE A 326 -1 O THR A 325 N THR A 280 SHEET 1 AC 2 ILE A 289 PHE A 291 0 SHEET 2 AC 2 ILE A 316 VAL A 318 -1 O ARG A 317 N LEU A 290 SHEET 1 AD 2 PHE A 296 ASN A 301 0 SHEET 2 AD 2 CYS A 306 VAL A 311 -1 O CYS A 306 N ASN A 301 SITE 1 AC1 16 LEU A 162 GLY A 163 GLU A 164 PHE A 167 SITE 2 AC1 16 VAL A 170 ALA A 184 LYS A 186 VAL A 220 SITE 3 AC1 16 PHE A 236 GLU A 237 GLU A 287 ASN A 288 SITE 4 AC1 16 LEU A 290 ASP A 320 HOH A2043 HOH A2045 SITE 1 AC2 4 ARG A 195 ARG A 199 LYS A 405 HOH A2158 SITE 1 AC3 8 ARG A 272 HIS A 275 THR A 462 LEU A 463 SITE 2 AC3 8 ALA A 464 HOH A2159 HOH A2160 HOH A2161 SITE 1 AC4 4 HIS A 330 THR A 332 THR A 333 HOH A2162 SITE 1 AC5 2 HIS A 396 HIS A 399 SITE 1 AC6 6 VAL A 191 GLY A 192 ARG A 338 ASN A 379 SITE 2 AC6 6 HOH A2163 HOH A2164 SITE 1 AC7 2 HIS A 330 HIS A 331 SITE 1 AC8 1 ARG A 338 CRYST1 87.870 62.200 75.370 90.00 97.97 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011380 0.000000 0.001593 0.00000 SCALE2 0.000000 0.016077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013397 0.00000