PDB Short entry for 2YNU HEADER HYDROLASE 18-OCT-12 2YNU TITLE APO GIM-1 WITH 2MOL. CRYSTAL STRUCTURES OF PSEUDOMONAS AERUGINOSA GIM- TITLE 2 1: ACTIVE SITE PLASTICITY IN METALLO-BETA-LACTAMASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: GIM-1 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METALLO-BETA-LACTAMASE GIM-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: STAR PLYSS PRARE KEYWDS HYDROLASE, ANTIBIOTIC RESISTANCE, RESIDUE DETERMINANTS, LOOP DYNAMICS EXPDTA X-RAY DIFFRACTION AUTHOR P.S.BORRA,O.SAMUELSEN,J.SPENCER,M.S.LORENTZEN,H.-K.S.LEIROS REVDAT 2 08-MAY-24 2YNU 1 REMARK REVDAT 1 24-JUL-13 2YNU 0 JRNL AUTH P.S.BORRA,O.SAMUELSEN,J.SPENCER,T.R.WALSH,M.S.LORENTZEN, JRNL AUTH 2 H.-K.S.LEIROS JRNL TITL CRYSTAL STRUCTURES OF PSEUDOMONAS AERUGINOSA GIM-1: JRNL TITL 2 ACTIVE-SITE PLASTICITY IN METALLO-BETA-LACTAMASES. JRNL REF ANTIMICROB.AGENTS CHEMOTHER. V. 57 848 2013 JRNL REFN ISSN 0066-4804 JRNL PMID 23208706 JRNL DOI 10.1128/AAC.02227-12 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 25008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7133 - 4.2720 0.94 2584 149 0.1513 0.1811 REMARK 3 2 4.2720 - 3.3965 0.95 2618 129 0.1646 0.2263 REMARK 3 3 3.3965 - 2.9688 0.97 2624 134 0.1933 0.2418 REMARK 3 4 2.9688 - 2.6981 0.97 2666 118 0.2163 0.2921 REMARK 3 5 2.6981 - 2.5051 0.97 2642 138 0.2143 0.3236 REMARK 3 6 2.5051 - 2.3577 0.98 2639 148 0.2287 0.2595 REMARK 3 7 2.3577 - 2.2398 0.98 2642 150 0.2371 0.3072 REMARK 3 8 2.2398 - 2.1424 0.98 2608 161 0.2570 0.3049 REMARK 3 9 2.1424 - 2.0600 0.99 2717 141 0.2746 0.3378 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 3507 REMARK 3 ANGLE : 1.519 4781 REMARK 3 CHIRALITY : 0.085 533 REMARK 3 PLANARITY : 0.008 609 REMARK 3 DIHEDRAL : 15.465 1275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YNU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1290054502. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97239 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25067 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 7.1, 21% POLYETHYLENE REMARK 280 GLYCOL MONOMETHYL ETHER 2000 (PEG MME 2K), 4% GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 67.69250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 36 REMARK 465 GLN A 37 REMARK 465 GLY A 38 REMARK 465 HIS A 39 REMARK 465 LYS A 296 REMARK 465 LEU A 297 REMARK 465 MET A 298 REMARK 465 GLN A 299 REMARK 465 PRO A 300 REMARK 465 THR A 301 REMARK 465 ALA A 302 REMARK 465 GLU A 303 REMARK 465 ALA A 304 REMARK 465 SER A 305 REMARK 465 ALA A 306 REMARK 465 ASP A 307 REMARK 465 SER B 36 REMARK 465 GLN B 37 REMARK 465 GLY B 38 REMARK 465 HIS B 39 REMARK 465 GLY B 232 REMARK 465 TYR B 233 REMARK 465 VAL B 234 REMARK 465 GLY B 235 REMARK 465 ASP B 236 REMARK 465 ALA B 237 REMARK 465 SER B 294 REMARK 465 ASN B 295 REMARK 465 LYS B 296 REMARK 465 LEU B 297 REMARK 465 MET B 298 REMARK 465 GLN B 299 REMARK 465 PRO B 300 REMARK 465 THR B 301 REMARK 465 ALA B 302 REMARK 465 GLU B 303 REMARK 465 ALA B 304 REMARK 465 SER B 305 REMARK 465 ALA B 306 REMARK 465 ASP B 307 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 293 N CA C O CB REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 179 OE1 REMARK 480 GLU A 227 CG CD OE1 OE2 REMARK 480 GLY A 235 CA REMARK 480 LYS A 253 CD CE NZ REMARK 480 ASP B 50 CB CG OD1 OD2 REMARK 480 LYS B 59 CG CD CE NZ REMARK 480 GLU B 62 CD OE1 OE2 REMARK 480 LYS B 165 CE NZ REMARK 480 LYS B 173 CB CG CD CE NZ REMARK 480 GLU B 179 OE1 REMARK 480 ASN B 184 ND2 REMARK 480 LYS B 210 CD CE NZ REMARK 480 SER B 241 CB OG REMARK 480 LYS B 247 CG CD CE NZ REMARK 480 LYS B 253 CD CE NZ REMARK 480 ASP B 284 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ILE B 61 O HOH B 2008 1.24 REMARK 500 H ILE A 134 O HOH A 2059 1.30 REMARK 500 HZ2 LYS A 93 O HOH A 2035 1.35 REMARK 500 HE2 HIS A 285 O HOH A 2101 1.51 REMARK 500 O LEU A 128 O HOH A 2059 1.64 REMARK 500 O TRP A 242 O HOH A 2105 1.69 REMARK 500 N ILE A 134 O HOH A 2059 1.85 REMARK 500 O TRP A 228 O HOH A 2101 1.86 REMARK 500 N LYS A 40 O HOH A 2001 1.87 REMARK 500 O GLY B 65 O HOH B 2008 1.89 REMARK 500 N ILE B 61 O HOH B 2008 1.90 REMARK 500 O HOH A 2034 O HOH A 2035 1.92 REMARK 500 N SER A 245 O HOH A 2105 1.99 REMARK 500 NZ LYS A 93 O HOH A 2035 2.03 REMARK 500 O HOH A 2047 O HOH A 2094 2.04 REMARK 500 O LEU B 42 O HOH B 2003 2.06 REMARK 500 O ASP A 120 O HOH A 2017 2.06 REMARK 500 OE1 GLN A 79 O HOH A 2026 2.10 REMARK 500 O HOH A 2107 O HOH A 2108 2.11 REMARK 500 NE2 HIS A 285 O HOH A 2101 2.11 REMARK 500 O LYS A 173 O HOH A 2069 2.12 REMARK 500 O LEU B 127 OG SER B 130 2.13 REMARK 500 OE1 GLU A 198 O HOH A 2090 2.18 REMARK 500 C ASP A 120 O HOH A 2017 2.18 REMARK 500 OG SER B 117 O HOH B 2035 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 188 OH TYR B 171 2655 1.93 REMARK 500 O HOH A 2040 O HOH A 2070 1655 2.06 REMARK 500 O HOH A 2024 O HOH A 2068 1655 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 49 172.95 177.25 REMARK 500 TYR A 64 -50.89 -131.94 REMARK 500 ASN A 77 -121.32 56.00 REMARK 500 ASP A 84 126.42 71.53 REMARK 500 GLU A 229 31.38 -91.51 REMARK 500 SER A 294 2.50 -63.14 REMARK 500 LEU B 42 137.13 -38.74 REMARK 500 GLU B 49 168.93 169.01 REMARK 500 TYR B 64 -36.83 -132.07 REMARK 500 ASN B 77 -117.14 52.18 REMARK 500 ASP B 84 130.29 68.09 REMARK 500 PRO B 86 -179.93 -60.73 REMARK 500 PHE B 180 142.39 -170.85 REMARK 500 ASN B 184 58.51 77.21 REMARK 500 GLU B 229 33.93 -92.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YNT RELATED DB: PDB REMARK 900 GIM-1-3MOL NATIVE. CRYSTAL STRUCTURES OF PSEUDOMONAS AERUGINOSA GIM- REMARK 900 1: ACTIVE SITE PLASTICITY IN METALLO- BETA-LACTAMASES REMARK 900 RELATED ID: 2YNV RELATED DB: PDB REMARK 900 CYS221 OXIDIZED, MONO ZINC GIM-1 - GIM-1-OX. CRYSTAL STRUCTURES OF REMARK 900 PSEUDOMONAS AERUGINOSA GIM-1: ACTIVE SITE PLASTICITY IN METALLO- REMARK 900 BETA-LACTAMASES REMARK 900 RELATED ID: 2YNW RELATED DB: PDB REMARK 900 GIM-1-2MOL NATIVE. CRYSTAL STRUCTURES OF PSEUDOMONAS AERUGINOSA GIM- REMARK 900 1: ACTIVE SITE PLASTICITY IN METALLO- BETA-LACTAMASES REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 1-18 IN THE GENE SEQUENCE ARE REMOVED AND A HIS REMARK 999 TAG AND TEV CLEAVE SITE WAS INTRODUCED. A SERINE FROM THE REMARK 999 TEV SITE IS THEN THE FIRST RESIDUE FOLLOWED BY GLN19 IN REMARK 999 THE GENE. DBREF 2YNU A 37 307 UNP Q704V1 Q704V1_PSEAI 19 250 DBREF 2YNU B 37 306 UNP Q704V1 Q704V1_PSEAI 19 250 SEQADV 2YNU SER A 36 UNP Q704V1 EXPRESSION TAG SEQADV 2YNU SER B 36 UNP Q704V1 EXPRESSION TAG SEQRES 1 A 233 SER GLN GLY HIS LYS PRO LEU GLU VAL ILE LYS ILE GLU SEQRES 2 A 233 ASP GLY VAL TYR LEU HIS THR SER PHE LYS ASN ILE GLU SEQRES 3 A 233 GLY TYR GLY LEU VAL ASP SER ASN GLY LEU VAL VAL LEU SEQRES 4 A 233 ASP ASN ASN GLN ALA TYR ILE ILE ASP THR PRO TRP SER SEQRES 5 A 233 GLU GLU ASP THR LYS LEU LEU LEU SER TRP ALA THR ASP SEQRES 6 A 233 ARG GLY TYR GLN VAL MET ALA SER ILE SER THR HIS SER SEQRES 7 A 233 HIS GLU ASP ARG THR ALA GLY ILE LYS LEU LEU ASN SER SEQRES 8 A 233 LYS SER ILE PRO THR TYR THR SER GLU LEU THR LYS LYS SEQRES 9 A 233 LEU LEU ALA ARG GLU GLY LYS PRO VAL PRO THR HIS TYR SEQRES 10 A 233 PHE LYS ASP ASP GLU PHE THR LEU GLY ASN GLY LEU ILE SEQRES 11 A 233 GLU LEU TYR TYR PRO GLY ALA GLY HIS THR GLU ASP ASN SEQRES 12 A 233 ILE VAL ALA TRP LEU PRO LYS SER LYS ILE LEU PHE GLY SEQRES 13 A 233 GLY CYS LEU VAL ARG SER HIS GLU TRP GLU GLY LEU GLY SEQRES 14 A 233 TYR VAL GLY ASP ALA SER ILE SER SER TRP ALA ASP SER SEQRES 15 A 233 ILE LYS ASN ILE VAL SER LYS LYS TYR PRO ILE GLN MET SEQRES 16 A 233 VAL VAL PRO GLY HIS GLY LYS VAL GLY SER SER ASP ILE SEQRES 17 A 233 LEU ASP HIS THR ILE ASP LEU ALA GLU SER ALA SER ASN SEQRES 18 A 233 LYS LEU MET GLN PRO THR ALA GLU ALA SER ALA ASP SEQRES 1 B 233 SER GLN GLY HIS LYS PRO LEU GLU VAL ILE LYS ILE GLU SEQRES 2 B 233 ASP GLY VAL TYR LEU HIS THR SER PHE LYS ASN ILE GLU SEQRES 3 B 233 GLY TYR GLY LEU VAL ASP SER ASN GLY LEU VAL VAL LEU SEQRES 4 B 233 ASP ASN ASN GLN ALA TYR ILE ILE ASP THR PRO TRP SER SEQRES 5 B 233 GLU GLU ASP THR LYS LEU LEU LEU SER TRP ALA THR ASP SEQRES 6 B 233 ARG GLY TYR GLN VAL MET ALA SER ILE SER THR HIS SER SEQRES 7 B 233 HIS GLU ASP ARG THR ALA GLY ILE LYS LEU LEU ASN SER SEQRES 8 B 233 LYS SER ILE PRO THR TYR THR SER GLU LEU THR LYS LYS SEQRES 9 B 233 LEU LEU ALA ARG GLU GLY LYS PRO VAL PRO THR HIS TYR SEQRES 10 B 233 PHE LYS ASP ASP GLU PHE THR LEU GLY ASN GLY LEU ILE SEQRES 11 B 233 GLU LEU TYR TYR PRO GLY ALA GLY HIS THR GLU ASP ASN SEQRES 12 B 233 ILE VAL ALA TRP LEU PRO LYS SER LYS ILE LEU PHE GLY SEQRES 13 B 233 GLY CYS LEU VAL ARG SER HIS GLU TRP GLU GLY LEU GLY SEQRES 14 B 233 TYR VAL GLY ASP ALA SER ILE SER SER TRP ALA ASP SER SEQRES 15 B 233 ILE LYS ASN ILE VAL SER LYS LYS TYR PRO ILE GLN MET SEQRES 16 B 233 VAL VAL PRO GLY HIS GLY LYS VAL GLY SER SER ASP ILE SEQRES 17 B 233 LEU ASP HIS THR ILE ASP LEU ALA GLU SER ALA SER ASN SEQRES 18 B 233 LYS LEU MET GLN PRO THR ALA GLU ALA SER ALA ASP FORMUL 3 HOH *178(H2 O) HELIX 1 1 SER A 88 ARG A 104 1 15 HELIX 2 2 HIS A 118 ALA A 123 1 6 HELIX 3 3 GLY A 124 SER A 130 1 7 HELIX 4 4 GLU A 140 GLU A 149 1 10 HELIX 5 5 CYS A 221 VAL A 223 5 3 HELIX 6 6 SER A 238 SER A 251 1 14 HELIX 7 7 SER A 280 SER A 294 1 15 HELIX 8 8 SER B 88 ARG B 104 1 15 HELIX 9 9 HIS B 118 ALA B 123 1 6 HELIX 10 10 GLY B 124 LYS B 131 1 8 HELIX 11 11 GLU B 140 GLU B 149 1 10 HELIX 12 12 CYS B 221 VAL B 223 5 3 HELIX 13 13 SER B 238 LYS B 253 1 16 HELIX 14 14 SER B 280 SER B 292 1 13 SHEET 1 AA 7 GLU A 43 GLU A 49 0 SHEET 2 AA 7 VAL A 52 ILE A 61 -1 O VAL A 52 N ILE A 48 SHEET 3 AA 7 GLY A 65 ASP A 76 -1 O GLY A 65 N ILE A 61 SHEET 4 AA 7 GLN A 79 ILE A 83 -1 O GLN A 79 N ASP A 76 SHEET 5 AA 7 GLN A 107 ILE A 113 1 O GLN A 107 N ALA A 80 SHEET 6 AA 7 THR A 136 SER A 139 1 N TYR A 137 O SER A 112 SHEET 7 AA 7 HIS A 170 PHE A 172 1 O HIS A 170 N THR A 138 SHEET 1 AB 5 GLU A 179 LEU A 182 0 SHEET 2 AB 5 ILE A 187 TYR A 190 -1 O ILE A 187 N LEU A 182 SHEET 3 AB 5 VAL A 202 LEU A 205 -1 O VAL A 202 N TYR A 190 SHEET 4 AB 5 ILE A 216 GLY A 220 -1 O ILE A 216 N LEU A 205 SHEET 5 AB 5 MET A 258 PRO A 261 1 O MET A 258 N LEU A 217 SHEET 1 BA 7 GLU B 43 GLU B 49 0 SHEET 2 BA 7 VAL B 52 ILE B 61 -1 O VAL B 52 N ILE B 48 SHEET 3 BA 7 GLY B 65 ASP B 76 -1 O GLY B 65 N ILE B 61 SHEET 4 BA 7 GLN B 79 ILE B 83 -1 O GLN B 79 N ASP B 76 SHEET 5 BA 7 GLN B 107 ILE B 113 1 O GLN B 107 N ALA B 80 SHEET 6 BA 7 THR B 136 SER B 139 1 N TYR B 137 O SER B 112 SHEET 7 BA 7 HIS B 170 PHE B 172 1 O HIS B 170 N THR B 138 SHEET 1 BB 5 GLU B 179 LEU B 182 0 SHEET 2 BB 5 ILE B 187 TYR B 190 -1 O ILE B 187 N LEU B 182 SHEET 3 BB 5 VAL B 202 LEU B 205 -1 O VAL B 202 N TYR B 190 SHEET 4 BB 5 ILE B 216 GLY B 220 -1 O ILE B 216 N LEU B 205 SHEET 5 BB 5 MET B 258 PRO B 261 1 O MET B 258 N LEU B 217 CRYST1 38.788 135.385 40.509 90.00 90.23 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025781 0.000000 0.000103 0.00000 SCALE2 0.000000 0.007386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024686 0.00000