PDB Short entry for 2Z3Q HEADER CYTOKINE/CYTOKINE RECEPTOR 05-JUN-07 2Z3Q TITLE CRYSTAL STRUCTURE OF THE IL-15/IL-15RA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-15; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: IL-15; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INTERLEUKIN-15 RECEPTOR ALPHA CHAIN; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: IL-15RA, RESIDUES IN DATABASE 31-132; COMPND 10 SYNONYM: IL-15R-ALPHA, IL- 15RA; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: IL15RA; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS PROTEIN-PROTEIN COMPLEX, CYTOKINE/CYTOKINE RECEPTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.CHIRIFU,Y.YAMAGATA,S.J.DAVIS,S.IKEMIZU REVDAT 2 24-FEB-09 2Z3Q 1 VERSN REVDAT 1 04-SEP-07 2Z3Q 0 JRNL AUTH M.CHIRIFU,C.HAYASHI,T.NAKAMURA,S.TOMA,T.SHUTO, JRNL AUTH 2 H.KAI,Y.YAMAGATA,S.J.DAVIS,S.IKEMIZU JRNL TITL CRYSTAL STRUCTURE OF THE IL-15-IL-15RALPHA JRNL TITL 2 COMPLEX, A CYTOKINE-RECEPTOR UNIT PRESENTED IN JRNL TITL 3 TRANS JRNL REF NAT.IMMUNOL. V. 8 1001 2007 JRNL REFN ISSN 1529-2908 JRNL PMID 17643103 JRNL DOI 10.1038/NI1492 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1993 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2241 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.6700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3035 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 228 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.914 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3098 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4205 ; 1.714 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 384 ; 6.666 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;43.439 ;25.397 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 562 ;17.761 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.961 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 498 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2244 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1399 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2178 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 226 ; 0.189 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 92 ; 0.270 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.169 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1989 ; 1.185 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3178 ; 1.965 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1231 ; 2.721 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1027 ; 4.192 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 114 REMARK 3 ORIGIN FOR THE GROUP (A): 63.1700 8.7800 22.3550 REMARK 3 T TENSOR REMARK 3 T11: -.0372 T22: -.0428 REMARK 3 T33: -.1991 T12: .0324 REMARK 3 T13: -.0040 T23: -.0291 REMARK 3 L TENSOR REMARK 3 L11: 3.5420 L22: 2.8971 REMARK 3 L33: 4.2994 L12: -.0754 REMARK 3 L13: 1.4837 L23: -.0954 REMARK 3 S TENSOR REMARK 3 S11: -.0123 S12: -.0164 S13: .0064 REMARK 3 S21: .1973 S22: .0697 S23: -.1108 REMARK 3 S31: .1842 S32: .3549 S33: -.0574 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 70 REMARK 3 ORIGIN FOR THE GROUP (A): 45.8210 10.6370 6.1830 REMARK 3 T TENSOR REMARK 3 T11: -.0545 T22: -.0823 REMARK 3 T33: -.0602 T12: -.0092 REMARK 3 T13: -.1021 T23: -.0694 REMARK 3 L TENSOR REMARK 3 L11: 5.2533 L22: 10.0501 REMARK 3 L33: 2.3397 L12: -5.6411 REMARK 3 L13: 1.8040 L23: -2.9972 REMARK 3 S TENSOR REMARK 3 S11: .3730 S12: .5756 S13: -.4167 REMARK 3 S21: -.8402 S22: -.2318 S23: .6764 REMARK 3 S31: .2150 S32: .0294 S33: -.1412 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 112 REMARK 3 ORIGIN FOR THE GROUP (A): 44.6560 44.8410 6.9740 REMARK 3 T TENSOR REMARK 3 T11: -.0589 T22: -.0519 REMARK 3 T33: -.0914 T12: -.0033 REMARK 3 T13: .0280 T23: -.0538 REMARK 3 L TENSOR REMARK 3 L11: 4.5111 L22: 3.3318 REMARK 3 L33: 1.5417 L12: -.3597 REMARK 3 L13: -.8470 L23: -.1798 REMARK 3 S TENSOR REMARK 3 S11: .1006 S12: -.4110 S13: .4546 REMARK 3 S21: .0693 S22: .0098 S23: -.1631 REMARK 3 S31: -.0736 S32: .0274 S33: -.1104 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 70 REMARK 3 ORIGIN FOR THE GROUP (A): 61.4660 31.6400 -2.9370 REMARK 3 T TENSOR REMARK 3 T11: -.0563 T22: -.0562 REMARK 3 T33: -.1665 T12: .0176 REMARK 3 T13: .0147 T23: -.0104 REMARK 3 L TENSOR REMARK 3 L11: 3.1641 L22: 8.1069 REMARK 3 L33: 1.7799 L12: -2.6763 REMARK 3 L13: .0888 L23: -2.1585 REMARK 3 S TENSOR REMARK 3 S11: .1040 S12: .1235 S13: -.0752 REMARK 3 S21: -.2551 S22: -.1319 S23: .0528 REMARK 3 S31: .1516 S32: .0802 S33: .0279 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 2Z3Q COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027482. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39742 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.22200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.00600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.22200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.00600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 76 REMARK 465 ASN A 77 REMARK 465 GLY A 78 REMARK 465 ASN A 79 REMARK 465 VAL A 80 REMARK 465 ALA B -4 REMARK 465 MET B -3 REMARK 465 THR B 79 REMARK 465 VAL B 80 REMARK 465 THR B 81 REMARK 465 THR B 82 REMARK 465 ALA B 83 REMARK 465 GLY B 84 REMARK 465 VAL B 85 REMARK 465 THR B 86 REMARK 465 PRO B 87 REMARK 465 GLN B 88 REMARK 465 PRO B 89 REMARK 465 GLU B 90 REMARK 465 SER B 91 REMARK 465 LEU B 92 REMARK 465 SER B 93 REMARK 465 PRO B 94 REMARK 465 SER B 95 REMARK 465 GLY B 96 REMARK 465 LYS B 97 REMARK 465 GLU B 98 REMARK 465 PRO B 99 REMARK 465 ALA B 100 REMARK 465 ALA B 101 REMARK 465 SER B 102 REMARK 465 THR C 113 REMARK 465 SER C 114 REMARK 465 ALA D -4 REMARK 465 PRO D 74 REMARK 465 ALA D 75 REMARK 465 PRO D 76 REMARK 465 PRO D 77 REMARK 465 SER D 78 REMARK 465 THR D 79 REMARK 465 VAL D 80 REMARK 465 THR D 81 REMARK 465 THR D 82 REMARK 465 ALA D 83 REMARK 465 GLY D 84 REMARK 465 VAL D 85 REMARK 465 THR D 86 REMARK 465 PRO D 87 REMARK 465 GLN D 88 REMARK 465 PRO D 89 REMARK 465 GLU D 90 REMARK 465 SER D 91 REMARK 465 LEU D 92 REMARK 465 SER D 93 REMARK 465 PRO D 94 REMARK 465 SER D 95 REMARK 465 GLY D 96 REMARK 465 LYS D 97 REMARK 465 GLU D 98 REMARK 465 PRO D 99 REMARK 465 ALA D 100 REMARK 465 ALA D 101 REMARK 465 SER D 102 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 19 175.98 -50.55 REMARK 500 LEU A 74 -155.40 -114.61 REMARK 500 ASN A 112 -29.94 -169.43 REMARK 500 THR A 113 77.71 -101.10 REMARK 500 ILE B -1 -158.51 -113.16 REMARK 500 TYR B 22 -1.11 77.13 REMARK 500 ASN B 48 90.65 -59.92 REMARK 500 LEU B 61 125.30 -38.89 REMARK 500 PRO B 74 137.72 -37.83 REMARK 500 ASP C 30 66.07 -117.07 REMARK 500 VAL C 31 107.34 -51.33 REMARK 500 PRO C 33 -38.70 -39.93 REMARK 500 ALA D -2 41.47 -89.74 REMARK 500 LEU D 61 126.79 -39.41 REMARK 500 HIS D 71 79.71 -107.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA D -2 ILE D -1 -146.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z3R RELATED DB: PDB DBREF 2Z3Q A 1 114 UNP P40933 IL15_HUMAN 49 162 DBREF 2Z3Q B 1 102 UNP Q13261 I15RA_HUMAN 31 132 DBREF 2Z3Q C 1 114 UNP P40933 IL15_HUMAN 49 162 DBREF 2Z3Q D 1 102 UNP Q13261 I15RA_HUMAN 31 132 SEQADV 2Z3Q ALA A -4 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q MET A -3 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q ALA A -2 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q ILE A -1 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q SER A 0 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q ALA B -4 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q MET B -3 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q ALA B -2 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q ILE B -1 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q SER B 0 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q ALA C -4 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q MET C -3 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q ALA C -2 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q ILE C -1 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q SER C 0 UNP P40933 EXPRESSION TAG SEQADV 2Z3Q ALA D -4 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q MET D -3 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q ALA D -2 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q ILE D -1 UNP Q13261 EXPRESSION TAG SEQADV 2Z3Q SER D 0 UNP Q13261 EXPRESSION TAG SEQRES 1 A 119 ALA MET ALA ILE SER ASN TRP VAL ASN VAL ILE SER ASP SEQRES 2 A 119 LEU LYS LYS ILE GLU ASP LEU ILE GLN SER MET HIS ILE SEQRES 3 A 119 ASP ALA THR LEU TYR THR GLU SER ASP VAL HIS PRO SER SEQRES 4 A 119 CYS LYS VAL THR ALA MET LYS CYS PHE LEU LEU GLU LEU SEQRES 5 A 119 GLN VAL ILE SER LEU GLU SER GLY ASP ALA SER ILE HIS SEQRES 6 A 119 ASP THR VAL GLU ASN LEU ILE ILE LEU ALA ASN ASN SER SEQRES 7 A 119 LEU SER SER ASN GLY ASN VAL THR GLU SER GLY CYS LYS SEQRES 8 A 119 GLU CYS GLU GLU LEU GLU GLU LYS ASN ILE LYS GLU PHE SEQRES 9 A 119 LEU GLN SER PHE VAL HIS ILE VAL GLN MET PHE ILE ASN SEQRES 10 A 119 THR SER SEQRES 1 B 107 ALA MET ALA ILE SER ILE THR CYS PRO PRO PRO MET SER SEQRES 2 B 107 VAL GLU HIS ALA ASP ILE TRP VAL LYS SER TYR SER LEU SEQRES 3 B 107 TYR SER ARG GLU ARG TYR ILE CYS ASN SER GLY PHE LYS SEQRES 4 B 107 ARG LYS ALA GLY THR SER SER LEU THR GLU CYS VAL LEU SEQRES 5 B 107 ASN LYS ALA THR ASN VAL ALA HIS TRP THR THR PRO SER SEQRES 6 B 107 LEU LYS CYS ILE ARG ASP PRO ALA LEU VAL HIS GLN ARG SEQRES 7 B 107 PRO ALA PRO PRO SER THR VAL THR THR ALA GLY VAL THR SEQRES 8 B 107 PRO GLN PRO GLU SER LEU SER PRO SER GLY LYS GLU PRO SEQRES 9 B 107 ALA ALA SER SEQRES 1 C 119 ALA MET ALA ILE SER ASN TRP VAL ASN VAL ILE SER ASP SEQRES 2 C 119 LEU LYS LYS ILE GLU ASP LEU ILE GLN SER MET HIS ILE SEQRES 3 C 119 ASP ALA THR LEU TYR THR GLU SER ASP VAL HIS PRO SER SEQRES 4 C 119 CYS LYS VAL THR ALA MET LYS CYS PHE LEU LEU GLU LEU SEQRES 5 C 119 GLN VAL ILE SER LEU GLU SER GLY ASP ALA SER ILE HIS SEQRES 6 C 119 ASP THR VAL GLU ASN LEU ILE ILE LEU ALA ASN ASN SER SEQRES 7 C 119 LEU SER SER ASN GLY ASN VAL THR GLU SER GLY CYS LYS SEQRES 8 C 119 GLU CYS GLU GLU LEU GLU GLU LYS ASN ILE LYS GLU PHE SEQRES 9 C 119 LEU GLN SER PHE VAL HIS ILE VAL GLN MET PHE ILE ASN SEQRES 10 C 119 THR SER SEQRES 1 D 107 ALA MET ALA ILE SER ILE THR CYS PRO PRO PRO MET SER SEQRES 2 D 107 VAL GLU HIS ALA ASP ILE TRP VAL LYS SER TYR SER LEU SEQRES 3 D 107 TYR SER ARG GLU ARG TYR ILE CYS ASN SER GLY PHE LYS SEQRES 4 D 107 ARG LYS ALA GLY THR SER SER LEU THR GLU CYS VAL LEU SEQRES 5 D 107 ASN LYS ALA THR ASN VAL ALA HIS TRP THR THR PRO SER SEQRES 6 D 107 LEU LYS CYS ILE ARG ASP PRO ALA LEU VAL HIS GLN ARG SEQRES 7 D 107 PRO ALA PRO PRO SER THR VAL THR THR ALA GLY VAL THR SEQRES 8 D 107 PRO GLN PRO GLU SER LEU SER PRO SER GLY LYS GLU PRO SEQRES 9 D 107 ALA ALA SER FORMUL 5 HOH *228(H2 O) HELIX 1 1 SER A 0 GLN A 17 1 18 HELIX 2 2 HIS A 32 SER A 34 5 3 HELIX 3 3 CYS A 35 GLY A 55 1 21 HELIX 4 4 ASP A 56 ASN A 72 1 17 HELIX 5 5 GLU A 87 LEU A 91 5 5 HELIX 6 6 ASN A 95 ILE A 111 1 17 HELIX 7 7 ASP B 66 ARG B 73 1 8 HELIX 8 8 SER C 0 ILE C 16 1 17 HELIX 9 9 CYS C 35 GLY C 55 1 21 HELIX 10 10 ASP C 56 SER C 76 1 21 HELIX 11 11 GLU C 87 LEU C 91 5 5 HELIX 12 12 ASN C 95 ILE C 111 1 17 HELIX 13 13 ASP D 66 HIS D 71 1 6 SHEET 1 A 2 LEU A 25 THR A 27 0 SHEET 2 A 2 GLU A 92 LYS A 94 -1 O LYS A 94 N LEU A 25 SHEET 1 B 4 ALA B 12 ILE B 14 0 SHEET 2 B 4 ARG B 24 CYS B 29 -1 O ILE B 28 N ASP B 13 SHEET 3 B 4 LEU B 42 LEU B 47 -1 O THR B 43 N GLU B 25 SHEET 4 B 4 ALA B 54 TRP B 56 -1 O HIS B 55 N VAL B 46 SHEET 1 C 2 PHE B 33 ARG B 35 0 SHEET 2 C 2 CYS B 63 ARG B 65 -1 O ILE B 64 N LYS B 34 SHEET 1 D 2 LEU C 25 TYR C 26 0 SHEET 2 D 2 GLU C 93 LYS C 94 -1 O LYS C 94 N LEU C 25 SHEET 1 E 4 ALA D 12 ILE D 14 0 SHEET 2 E 4 ARG D 24 CYS D 29 -1 O ILE D 28 N ASP D 13 SHEET 3 E 4 LEU D 42 ASN D 48 -1 O THR D 43 N GLU D 25 SHEET 4 E 4 VAL D 53 TRP D 56 -1 O VAL D 53 N ASN D 48 SHEET 1 F 2 PHE D 33 ARG D 35 0 SHEET 2 F 2 CYS D 63 ARG D 65 -1 O ILE D 64 N LYS D 34 SSBOND 1 CYS A 35 CYS A 85 1555 1555 2.08 SSBOND 2 CYS A 42 CYS A 88 1555 1555 2.08 SSBOND 3 CYS B 3 CYS B 45 1555 1555 2.01 SSBOND 4 CYS B 29 CYS B 63 1555 1555 2.07 SSBOND 5 CYS C 35 CYS C 85 1555 1555 2.01 SSBOND 6 CYS C 42 CYS C 88 1555 1555 2.08 SSBOND 7 CYS D 3 CYS D 45 1555 1555 1.99 SSBOND 8 CYS D 29 CYS D 63 1555 1555 2.06 CISPEP 1 ASN A 112 THR A 113 0 -1.65 CISPEP 2 MET D -3 ALA D -2 0 -25.97 CRYST1 78.444 120.012 49.459 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012748 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020219 0.00000