PDB Short entry for 2Z66 HEADER IMMUNE SYSTEM 22-JUL-07 2Z66 TITLE CRYSTAL STRUCTURE OF THE VT3 HYBRID OF HUMAN TLR4 AND HAGFISH VLRB.61 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VARIABLE LYMPHOCYTE RECEPTOR B, TOLL-LIKE RECEPTOR 4; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: VLRB.61, UNP RESIDUES 24-82(INSHORE HAGFISH), TLR4, UNP COMPND 5 RESIDUES 383-228(HUMAN); COMPND 6 SYNONYM: HTOLL, CD284 ANTIGEN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EPTATRETUS BURGERI, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: INSHORE HAGFISH, HUMAN; SOURCE 4 ORGANISM_TAXID: 7764, 9606; SOURCE 5 GENE: VLRB.61, TLR4; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HI-5; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PVL1393 KEYWDS TLR4, TOLL-LIKE RECEPTOR, MD-2, LPS, LEUCINE-RICH REPEAT, KEYWDS 2 GLYCOPROTEIN, IMMUNE RESPONSE, INFLAMMATORY RESPONSE, INNATE KEYWDS 3 IMMUNITY, MEMBRANE, TRANSMEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.-O.LEE,H.M.KIM,B.S.PARK REVDAT 7 01-NOV-23 2Z66 1 HETSYN REVDAT 6 29-JUL-20 2Z66 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 09-AUG-17 2Z66 1 SOURCE REMARK REVDAT 4 13-JUL-11 2Z66 1 VERSN REVDAT 3 21-JUL-10 2Z66 1 REMARK REVDAT 2 24-FEB-09 2Z66 1 VERSN REVDAT 1 18-SEP-07 2Z66 0 JRNL AUTH H.M.KIM,B.S.PARK,J.-I.KIM,S.E.KIM,J.LEE,S.C.OH,P.ENKHBAYAR, JRNL AUTH 2 N.MATSUSHIMA,H.LEE,O.J.YOO,J.-O.LEE JRNL TITL CRYSTAL STRUCTURE OF THE TLR4-MD-2 COMPLEX WITH BOUND JRNL TITL 2 ENDOTOXIN ANTAGONIST ERITORAN JRNL REF CELL(CAMBRIDGE,MASS.) V. 130 906 2007 JRNL REFN ISSN 0092-8674 JRNL PMID 17803912 JRNL DOI 10.1016/J.CELL.2007.08.002 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 112862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5929 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8027 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 425 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 596 REMARK 3 SOLVENT ATOMS : 472 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : -0.10000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 0.03000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.161 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.484 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10456 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14208 ; 1.098 ; 2.031 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1216 ; 4.932 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 448 ;37.911 ;25.357 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1756 ;12.099 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;15.211 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1736 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7416 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3944 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7023 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 505 ; 0.104 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 97 ; 0.291 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.114 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6334 ; 1.416 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9876 ; 1.877 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4516 ; 3.367 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4332 ; 4.715 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 24 A 627 1 REMARK 3 1 B 24 B 627 1 REMARK 3 1 C 24 C 627 1 REMARK 3 1 D 24 D 627 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2405 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 2405 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 2405 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 2405 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 2405 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 2405 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 2405 ; 0.18 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 2405 ; 0.19 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : M F I S REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 M 1401 A 1433 1 REMARK 3 1 F 1401 B 1433 1 REMARK 3 1 I 1401 C 1433 1 REMARK 3 1 S 1401 D 1433 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 144 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 144 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 144 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 144 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 144 ; 0.17 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 144 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 144 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 144 ; 0.15 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 627 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1646 -2.9059 -11.6360 REMARK 3 T TENSOR REMARK 3 T11: -0.1002 T22: -0.1433 REMARK 3 T33: -0.0872 T12: -0.0241 REMARK 3 T13: -0.0224 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.8383 L22: 0.6945 REMARK 3 L33: 1.4290 L12: 0.1004 REMARK 3 L13: -0.2135 L23: 0.0678 REMARK 3 S TENSOR REMARK 3 S11: -0.0344 S12: 0.0136 S13: -0.0342 REMARK 3 S21: -0.0436 S22: 0.0451 S23: -0.0707 REMARK 3 S31: 0.0487 S32: 0.1169 S33: -0.0107 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 24 B 627 REMARK 3 ORIGIN FOR THE GROUP (A): -29.4594 -8.5654 49.7598 REMARK 3 T TENSOR REMARK 3 T11: -0.0924 T22: -0.1393 REMARK 3 T33: -0.0867 T12: -0.0220 REMARK 3 T13: 0.0212 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.8276 L22: 0.6784 REMARK 3 L33: 1.2515 L12: 0.1197 REMARK 3 L13: 0.1513 L23: -0.0234 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: 0.0134 S13: 0.0323 REMARK 3 S21: -0.0511 S22: 0.0446 S23: 0.0678 REMARK 3 S31: -0.0427 S32: -0.1259 S33: -0.0130 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 24 C 627 REMARK 3 ORIGIN FOR THE GROUP (A): -29.4811 -36.8359 11.7003 REMARK 3 T TENSOR REMARK 3 T11: -0.1001 T22: -0.1396 REMARK 3 T33: -0.0878 T12: 0.0210 REMARK 3 T13: -0.0202 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.8427 L22: 0.6742 REMARK 3 L33: 1.2517 L12: -0.1359 REMARK 3 L13: -0.1226 L23: -0.0199 REMARK 3 S TENSOR REMARK 3 S11: -0.0329 S12: -0.0050 S13: -0.0349 REMARK 3 S21: 0.0458 S22: 0.0453 S23: 0.0694 REMARK 3 S31: 0.0550 S32: -0.1267 S33: -0.0124 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 24 D 627 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1104 -42.4953 73.0979 REMARK 3 T TENSOR REMARK 3 T11: -0.1023 T22: -0.1377 REMARK 3 T33: -0.0881 T12: 0.0240 REMARK 3 T13: 0.0224 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.8360 L22: 0.6919 REMARK 3 L33: 1.3426 L12: -0.0957 REMARK 3 L13: 0.1407 L23: 0.0669 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.0222 S13: 0.0268 REMARK 3 S21: 0.0383 S22: 0.0447 S23: -0.0725 REMARK 3 S31: -0.0552 S32: 0.1121 S33: -0.0127 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CYS390 AND CYS391 MAKES AN UNUSUAL REMARK 3 DISULFIDE BRIDGE AND AN DISTORTED CIS PEPTIDE BOND. REMARK 4 REMARK 4 2Z66 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000027570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 112862 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Z63 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 0.1M SODIUM REMARK 280 ACETATE, 24% PEG 4000, PH 5.50, TEMPERATURE 277K, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHOR DETERMINED BIOLOGICAL UNIT: UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, M, N, O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, Q, R, S, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 -160.49 -116.19 REMARK 500 SER A 84 65.05 65.92 REMARK 500 ASN A 409 -158.25 -127.45 REMARK 500 SER A 441 76.74 -112.64 REMARK 500 ALA A 462 -62.99 -145.56 REMARK 500 MET A 478 31.76 -140.88 REMARK 500 ASN A 481 -154.13 -107.22 REMARK 500 LEU A 495 55.14 -94.57 REMARK 500 ASN A 530 -159.14 -94.25 REMARK 500 ASN A 554 -163.07 -100.28 REMARK 500 MET A 557 -1.63 -144.33 REMARK 500 GLN A 565 -145.34 -96.86 REMARK 500 ASN B 61 -161.34 -116.53 REMARK 500 SER B 84 63.22 66.43 REMARK 500 ASN B 409 -158.77 -126.25 REMARK 500 SER B 441 76.64 -113.07 REMARK 500 ALA B 462 -62.72 -145.64 REMARK 500 LEU B 470 51.67 -90.55 REMARK 500 MET B 478 32.39 -140.95 REMARK 500 ASN B 481 -153.59 -107.68 REMARK 500 LEU B 495 55.42 -94.81 REMARK 500 ASN B 530 -159.18 -93.77 REMARK 500 ASN B 554 -163.65 -101.01 REMARK 500 MET B 557 -1.15 -144.62 REMARK 500 GLN B 565 -145.75 -97.96 REMARK 500 ASN C 61 -160.63 -117.33 REMARK 500 SER C 84 62.37 66.06 REMARK 500 ASN C 409 -158.60 -127.10 REMARK 500 SER C 441 76.81 -113.24 REMARK 500 ALA C 462 -63.49 -144.82 REMARK 500 LEU C 470 51.93 -91.09 REMARK 500 MET C 478 31.28 -140.81 REMARK 500 ASN C 481 -154.30 -107.36 REMARK 500 LEU C 495 54.69 -95.61 REMARK 500 ASN C 530 -158.70 -93.89 REMARK 500 ASN C 554 -164.21 -101.16 REMARK 500 MET C 557 -1.11 -144.09 REMARK 500 GLN C 565 -145.47 -98.11 REMARK 500 ASN D 61 -160.44 -116.58 REMARK 500 SER D 84 60.72 66.33 REMARK 500 ASN D 409 -158.05 -126.92 REMARK 500 SER D 441 76.14 -113.04 REMARK 500 ALA D 462 -63.50 -144.86 REMARK 500 MET D 478 31.43 -140.88 REMARK 500 ASN D 481 -152.99 -107.78 REMARK 500 LEU D 495 54.96 -95.28 REMARK 500 GLN D 507 19.98 58.71 REMARK 500 ASN D 530 -158.36 -93.73 REMARK 500 ASN D 554 -163.42 -100.39 REMARK 500 MET D 557 -1.87 -143.02 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 POLYSACCHARIDES WERE ORIGINALLY ASSIGNED TO CHAINS N, O, P, AND Q REMARK 600 RESPECTIVELY. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z62 RELATED DB: PDB REMARK 900 THE TV3 HYBRID OF HUMAN TLR4 AND HAGFISH VLRB.61 REMARK 900 RELATED ID: 2Z63 RELATED DB: PDB REMARK 900 THE TV8 HYBRID OF HUMAN TLR4 AND HAGFISH VLRB.61 REMARK 900 RELATED ID: 2Z64 RELATED DB: PDB REMARK 900 THE MOUSE TLR4 AND MOUSE MD-2 COMPLEX REMARK 900 RELATED ID: 2Z65 RELATED DB: PDB REMARK 900 THE HUMAN TLR4 TV3 HYBRID-MD-2-ERITORAN COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS COORDINATES IS USED NON-SEQUENTIAL RESIDUE NUMBERING. THIS REMARK 999 CONSTRUCT INCLUDES A LINKER THAT CONSIST OF 83TH AND 84TH SER. DBREF 2Z66 A 24 82 UNP Q4G1L2 Q4G1L2_EPTBU 24 82 DBREF 2Z66 A 383 627 UNP O00206 TLR4_HUMAN 383 627 DBREF 2Z66 B 24 82 UNP Q4G1L2 Q4G1L2_EPTBU 24 82 DBREF 2Z66 B 383 627 UNP O00206 TLR4_HUMAN 383 627 DBREF 2Z66 C 24 82 UNP Q4G1L2 Q4G1L2_EPTBU 24 82 DBREF 2Z66 C 383 627 UNP O00206 TLR4_HUMAN 383 627 DBREF 2Z66 D 24 82 UNP Q4G1L2 Q4G1L2_EPTBU 24 82 DBREF 2Z66 D 383 627 UNP O00206 TLR4_HUMAN 383 627 SEQADV 2Z66 SER A 83 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER A 84 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER B 83 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER B 84 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER C 83 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER C 84 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER D 83 UNP O00206 SEE REMARK 999 SEQADV 2Z66 SER D 84 UNP O00206 SEE REMARK 999 SEQRES 1 A 306 CYS PRO SER ARG CYS SER CYS SER GLY THR GLU ILE ARG SEQRES 2 A 306 CYS ASN SER LYS GLY LEU THR SER VAL PRO THR GLY ILE SEQRES 3 A 306 PRO SER SER ALA THR ARG LEU GLU LEU GLU SER ASN LYS SEQRES 4 A 306 LEU GLN SER LEU PRO HIS GLY VAL PHE ASP LYS LEU THR SEQRES 5 A 306 GLN LEU THR LYS LEU SER LEU SER SER ASN GLY LEU SER SEQRES 6 A 306 PHE LYS GLY CYS CYS SER GLN SER ASP PHE GLY THR THR SEQRES 7 A 306 SER LEU LYS TYR LEU ASP LEU SER PHE ASN GLY VAL ILE SEQRES 8 A 306 THR MET SER SER ASN PHE LEU GLY LEU GLU GLN LEU GLU SEQRES 9 A 306 HIS LEU ASP PHE GLN HIS SER ASN LEU LYS GLN MET SER SEQRES 10 A 306 GLU PHE SER VAL PHE LEU SER LEU ARG ASN LEU ILE TYR SEQRES 11 A 306 LEU ASP ILE SER HIS THR HIS THR ARG VAL ALA PHE ASN SEQRES 12 A 306 GLY ILE PHE ASN GLY LEU SER SER LEU GLU VAL LEU LYS SEQRES 13 A 306 MET ALA GLY ASN SER PHE GLN GLU ASN PHE LEU PRO ASP SEQRES 14 A 306 ILE PHE THR GLU LEU ARG ASN LEU THR PHE LEU ASP LEU SEQRES 15 A 306 SER GLN CYS GLN LEU GLU GLN LEU SER PRO THR ALA PHE SEQRES 16 A 306 ASN SER LEU SER SER LEU GLN VAL LEU ASN MET SER HIS SEQRES 17 A 306 ASN ASN PHE PHE SER LEU ASP THR PHE PRO TYR LYS CYS SEQRES 18 A 306 LEU ASN SER LEU GLN VAL LEU ASP TYR SER LEU ASN HIS SEQRES 19 A 306 ILE MET THR SER LYS LYS GLN GLU LEU GLN HIS PHE PRO SEQRES 20 A 306 SER SER LEU ALA PHE LEU ASN LEU THR GLN ASN ASP PHE SEQRES 21 A 306 ALA CYS THR CYS GLU HIS GLN SER PHE LEU GLN TRP ILE SEQRES 22 A 306 LYS ASP GLN ARG GLN LEU LEU VAL GLU VAL GLU ARG MET SEQRES 23 A 306 GLU CYS ALA THR PRO SER ASP LYS GLN GLY MET PRO VAL SEQRES 24 A 306 LEU SER LEU ASN ILE THR CYS SEQRES 1 B 306 CYS PRO SER ARG CYS SER CYS SER GLY THR GLU ILE ARG SEQRES 2 B 306 CYS ASN SER LYS GLY LEU THR SER VAL PRO THR GLY ILE SEQRES 3 B 306 PRO SER SER ALA THR ARG LEU GLU LEU GLU SER ASN LYS SEQRES 4 B 306 LEU GLN SER LEU PRO HIS GLY VAL PHE ASP LYS LEU THR SEQRES 5 B 306 GLN LEU THR LYS LEU SER LEU SER SER ASN GLY LEU SER SEQRES 6 B 306 PHE LYS GLY CYS CYS SER GLN SER ASP PHE GLY THR THR SEQRES 7 B 306 SER LEU LYS TYR LEU ASP LEU SER PHE ASN GLY VAL ILE SEQRES 8 B 306 THR MET SER SER ASN PHE LEU GLY LEU GLU GLN LEU GLU SEQRES 9 B 306 HIS LEU ASP PHE GLN HIS SER ASN LEU LYS GLN MET SER SEQRES 10 B 306 GLU PHE SER VAL PHE LEU SER LEU ARG ASN LEU ILE TYR SEQRES 11 B 306 LEU ASP ILE SER HIS THR HIS THR ARG VAL ALA PHE ASN SEQRES 12 B 306 GLY ILE PHE ASN GLY LEU SER SER LEU GLU VAL LEU LYS SEQRES 13 B 306 MET ALA GLY ASN SER PHE GLN GLU ASN PHE LEU PRO ASP SEQRES 14 B 306 ILE PHE THR GLU LEU ARG ASN LEU THR PHE LEU ASP LEU SEQRES 15 B 306 SER GLN CYS GLN LEU GLU GLN LEU SER PRO THR ALA PHE SEQRES 16 B 306 ASN SER LEU SER SER LEU GLN VAL LEU ASN MET SER HIS SEQRES 17 B 306 ASN ASN PHE PHE SER LEU ASP THR PHE PRO TYR LYS CYS SEQRES 18 B 306 LEU ASN SER LEU GLN VAL LEU ASP TYR SER LEU ASN HIS SEQRES 19 B 306 ILE MET THR SER LYS LYS GLN GLU LEU GLN HIS PHE PRO SEQRES 20 B 306 SER SER LEU ALA PHE LEU ASN LEU THR GLN ASN ASP PHE SEQRES 21 B 306 ALA CYS THR CYS GLU HIS GLN SER PHE LEU GLN TRP ILE SEQRES 22 B 306 LYS ASP GLN ARG GLN LEU LEU VAL GLU VAL GLU ARG MET SEQRES 23 B 306 GLU CYS ALA THR PRO SER ASP LYS GLN GLY MET PRO VAL SEQRES 24 B 306 LEU SER LEU ASN ILE THR CYS SEQRES 1 C 306 CYS PRO SER ARG CYS SER CYS SER GLY THR GLU ILE ARG SEQRES 2 C 306 CYS ASN SER LYS GLY LEU THR SER VAL PRO THR GLY ILE SEQRES 3 C 306 PRO SER SER ALA THR ARG LEU GLU LEU GLU SER ASN LYS SEQRES 4 C 306 LEU GLN SER LEU PRO HIS GLY VAL PHE ASP LYS LEU THR SEQRES 5 C 306 GLN LEU THR LYS LEU SER LEU SER SER ASN GLY LEU SER SEQRES 6 C 306 PHE LYS GLY CYS CYS SER GLN SER ASP PHE GLY THR THR SEQRES 7 C 306 SER LEU LYS TYR LEU ASP LEU SER PHE ASN GLY VAL ILE SEQRES 8 C 306 THR MET SER SER ASN PHE LEU GLY LEU GLU GLN LEU GLU SEQRES 9 C 306 HIS LEU ASP PHE GLN HIS SER ASN LEU LYS GLN MET SER SEQRES 10 C 306 GLU PHE SER VAL PHE LEU SER LEU ARG ASN LEU ILE TYR SEQRES 11 C 306 LEU ASP ILE SER HIS THR HIS THR ARG VAL ALA PHE ASN SEQRES 12 C 306 GLY ILE PHE ASN GLY LEU SER SER LEU GLU VAL LEU LYS SEQRES 13 C 306 MET ALA GLY ASN SER PHE GLN GLU ASN PHE LEU PRO ASP SEQRES 14 C 306 ILE PHE THR GLU LEU ARG ASN LEU THR PHE LEU ASP LEU SEQRES 15 C 306 SER GLN CYS GLN LEU GLU GLN LEU SER PRO THR ALA PHE SEQRES 16 C 306 ASN SER LEU SER SER LEU GLN VAL LEU ASN MET SER HIS SEQRES 17 C 306 ASN ASN PHE PHE SER LEU ASP THR PHE PRO TYR LYS CYS SEQRES 18 C 306 LEU ASN SER LEU GLN VAL LEU ASP TYR SER LEU ASN HIS SEQRES 19 C 306 ILE MET THR SER LYS LYS GLN GLU LEU GLN HIS PHE PRO SEQRES 20 C 306 SER SER LEU ALA PHE LEU ASN LEU THR GLN ASN ASP PHE SEQRES 21 C 306 ALA CYS THR CYS GLU HIS GLN SER PHE LEU GLN TRP ILE SEQRES 22 C 306 LYS ASP GLN ARG GLN LEU LEU VAL GLU VAL GLU ARG MET SEQRES 23 C 306 GLU CYS ALA THR PRO SER ASP LYS GLN GLY MET PRO VAL SEQRES 24 C 306 LEU SER LEU ASN ILE THR CYS SEQRES 1 D 306 CYS PRO SER ARG CYS SER CYS SER GLY THR GLU ILE ARG SEQRES 2 D 306 CYS ASN SER LYS GLY LEU THR SER VAL PRO THR GLY ILE SEQRES 3 D 306 PRO SER SER ALA THR ARG LEU GLU LEU GLU SER ASN LYS SEQRES 4 D 306 LEU GLN SER LEU PRO HIS GLY VAL PHE ASP LYS LEU THR SEQRES 5 D 306 GLN LEU THR LYS LEU SER LEU SER SER ASN GLY LEU SER SEQRES 6 D 306 PHE LYS GLY CYS CYS SER GLN SER ASP PHE GLY THR THR SEQRES 7 D 306 SER LEU LYS TYR LEU ASP LEU SER PHE ASN GLY VAL ILE SEQRES 8 D 306 THR MET SER SER ASN PHE LEU GLY LEU GLU GLN LEU GLU SEQRES 9 D 306 HIS LEU ASP PHE GLN HIS SER ASN LEU LYS GLN MET SER SEQRES 10 D 306 GLU PHE SER VAL PHE LEU SER LEU ARG ASN LEU ILE TYR SEQRES 11 D 306 LEU ASP ILE SER HIS THR HIS THR ARG VAL ALA PHE ASN SEQRES 12 D 306 GLY ILE PHE ASN GLY LEU SER SER LEU GLU VAL LEU LYS SEQRES 13 D 306 MET ALA GLY ASN SER PHE GLN GLU ASN PHE LEU PRO ASP SEQRES 14 D 306 ILE PHE THR GLU LEU ARG ASN LEU THR PHE LEU ASP LEU SEQRES 15 D 306 SER GLN CYS GLN LEU GLU GLN LEU SER PRO THR ALA PHE SEQRES 16 D 306 ASN SER LEU SER SER LEU GLN VAL LEU ASN MET SER HIS SEQRES 17 D 306 ASN ASN PHE PHE SER LEU ASP THR PHE PRO TYR LYS CYS SEQRES 18 D 306 LEU ASN SER LEU GLN VAL LEU ASP TYR SER LEU ASN HIS SEQRES 19 D 306 ILE MET THR SER LYS LYS GLN GLU LEU GLN HIS PHE PRO SEQRES 20 D 306 SER SER LEU ALA PHE LEU ASN LEU THR GLN ASN ASP PHE SEQRES 21 D 306 ALA CYS THR CYS GLU HIS GLN SER PHE LEU GLN TRP ILE SEQRES 22 D 306 LYS ASP GLN ARG GLN LEU LEU VAL GLU VAL GLU ARG MET SEQRES 23 D 306 GLU CYS ALA THR PRO SER ASP LYS GLN GLY MET PRO VAL SEQRES 24 D 306 LEU SER LEU ASN ILE THR CYS MODRES 2Z66 ASN A 526 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN B 526 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN D 526 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN D 624 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN C 526 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN A 624 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN C 624 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN C 575 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN A 575 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN B 624 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN D 575 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN A 497 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN B 575 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN C 497 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN D 497 ASN GLYCOSYLATION SITE MODRES 2Z66 ASN B 497 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET FUL G 4 10 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET NAG J 1 14 HET NAG J 2 14 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET FUL K 4 10 HET NAG L 1 14 HET NAG L 2 14 HET NAG M 1 14 HET NAG M 2 14 HET BMA M 3 11 HET NAG N 1 14 HET NAG N 2 14 HET NAG O 1 14 HET NAG O 2 14 HET BMA O 3 11 HET FUL O 4 10 HET NAG P 1 14 HET NAG P 2 14 HET NAG Q 1 14 HET NAG Q 2 14 HET BMA Q 3 11 HET NAG R 1 14 HET NAG R 2 14 HET NAG S 1 14 HET NAG S 2 14 HET BMA S 3 11 HET FUL S 4 10 HET NAG T 1 14 HET NAG T 2 14 HET SO4 A2001 5 HET SO4 B2002 5 HET SO4 C2003 5 HET SO4 D2004 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE FORMUL 5 NAG 32(C8 H15 N O6) FORMUL 5 BMA 8(C6 H12 O6) FORMUL 7 FUL 4(C6 H12 O5) FORMUL 21 SO4 4(O4 S 2-) FORMUL 25 HOH *472(H2 O) HELIX 1 1 GLN A 393 GLY A 397 1 5 HELIX 2 2 THR A 537 LYS A 541 5 5 HELIX 3 3 THR A 584 GLU A 586 5 3 HELIX 4 4 HIS A 587 GLN A 597 1 11 HELIX 5 5 ARG A 598 LEU A 601 5 4 HELIX 6 6 GLU A 603 MET A 607 5 5 HELIX 7 7 PRO A 612 GLN A 616 5 5 HELIX 8 8 PRO A 619 LEU A 623 5 5 HELIX 9 9 GLN B 393 GLY B 397 1 5 HELIX 10 10 THR B 537 LYS B 541 5 5 HELIX 11 11 THR B 584 GLU B 586 5 3 HELIX 12 12 HIS B 587 GLN B 597 1 11 HELIX 13 13 ARG B 598 LEU B 601 5 4 HELIX 14 14 GLU B 603 MET B 607 5 5 HELIX 15 15 PRO B 612 GLN B 616 5 5 HELIX 16 16 PRO B 619 LEU B 623 5 5 HELIX 17 17 GLN C 393 GLY C 397 1 5 HELIX 18 18 THR C 537 LYS C 541 5 5 HELIX 19 19 THR C 584 GLU C 586 5 3 HELIX 20 20 HIS C 587 GLN C 597 1 11 HELIX 21 21 GLU C 603 MET C 607 5 5 HELIX 22 22 PRO C 612 GLN C 616 5 5 HELIX 23 23 PRO C 619 LEU C 623 5 5 HELIX 24 24 GLN D 393 GLY D 397 1 5 HELIX 25 25 THR D 537 LYS D 541 5 5 HELIX 26 26 THR D 584 GLU D 586 5 3 HELIX 27 27 HIS D 587 GLN D 597 1 11 HELIX 28 28 ARG D 598 LEU D 601 5 4 HELIX 29 29 GLU D 603 MET D 607 5 5 HELIX 30 30 PRO D 612 GLN D 616 5 5 HELIX 31 31 PRO D 619 LEU D 623 5 5 SHEET 1 A12 SER A 29 SER A 31 0 SHEET 2 A12 GLU A 34 ARG A 36 -1 O ARG A 36 N SER A 29 SHEET 3 A12 ARG A 55 GLU A 57 1 O ARG A 55 N ILE A 35 SHEET 4 A12 LYS A 79 SER A 81 1 O SER A 81 N LEU A 56 SHEET 5 A12 TYR A 403 ASP A 405 1 O TYR A 403 N LEU A 80 SHEET 6 A12 HIS A 426 ASP A 428 1 O HIS A 426 N LEU A 404 SHEET 7 A12 TYR A 451 ASP A 453 1 O TYR A 451 N LEU A 427 SHEET 8 A12 VAL A 475 LYS A 477 1 O LYS A 477 N LEU A 452 SHEET 9 A12 PHE A 500 ASP A 502 1 O PHE A 500 N LEU A 476 SHEET 10 A12 VAL A 524 ASN A 526 1 O ASN A 526 N LEU A 501 SHEET 11 A12 VAL A 548 ASP A 550 1 O ASP A 550 N LEU A 525 SHEET 12 A12 PHE A 573 ASN A 575 1 O PHE A 573 N LEU A 549 SHEET 1 B 3 PHE A 387 SER A 392 0 SHEET 2 B 3 VAL A 411 LEU A 419 1 O THR A 413 N PHE A 387 SHEET 3 B 3 ASN A 433 LYS A 435 1 O ASN A 433 N ILE A 412 SHEET 1 C 2 ARG A 460 VAL A 461 0 SHEET 2 C 2 SER A 482 PHE A 483 1 O SER A 482 N VAL A 461 SHEET 1 D 2 PHE A 487 LEU A 488 0 SHEET 2 D 2 GLN A 510 LEU A 511 1 O GLN A 510 N LEU A 488 SHEET 1 E 2 PHE A 581 ALA A 582 0 SHEET 2 E 2 CYS A 609 THR A 611 1 O ALA A 610 N PHE A 581 SHEET 1 F12 SER B 29 SER B 31 0 SHEET 2 F12 GLU B 34 ARG B 36 -1 O ARG B 36 N SER B 29 SHEET 3 F12 ARG B 55 GLU B 57 1 O ARG B 55 N ILE B 35 SHEET 4 F12 LYS B 79 SER B 81 1 O SER B 81 N LEU B 56 SHEET 5 F12 TYR B 403 ASP B 405 1 O TYR B 403 N LEU B 80 SHEET 6 F12 HIS B 426 ASP B 428 1 O HIS B 426 N LEU B 404 SHEET 7 F12 TYR B 451 ASP B 453 1 O TYR B 451 N LEU B 427 SHEET 8 F12 VAL B 475 LYS B 477 1 O LYS B 477 N LEU B 452 SHEET 9 F12 PHE B 500 ASP B 502 1 O PHE B 500 N LEU B 476 SHEET 10 F12 VAL B 524 ASN B 526 1 O ASN B 526 N LEU B 501 SHEET 11 F12 VAL B 548 ASP B 550 1 O ASP B 550 N LEU B 525 SHEET 12 F12 PHE B 573 ASN B 575 1 O PHE B 573 N LEU B 549 SHEET 1 G 3 PHE B 387 SER B 392 0 SHEET 2 G 3 VAL B 411 LEU B 419 1 O THR B 413 N PHE B 387 SHEET 3 G 3 ASN B 433 LYS B 435 1 O LYS B 435 N ILE B 412 SHEET 1 H 2 ARG B 460 VAL B 461 0 SHEET 2 H 2 SER B 482 PHE B 483 1 O SER B 482 N VAL B 461 SHEET 1 I 2 PHE B 487 LEU B 488 0 SHEET 2 I 2 GLN B 510 LEU B 511 1 O GLN B 510 N LEU B 488 SHEET 1 J 2 PHE B 581 ALA B 582 0 SHEET 2 J 2 CYS B 609 THR B 611 1 O ALA B 610 N PHE B 581 SHEET 1 K12 SER C 29 SER C 31 0 SHEET 2 K12 GLU C 34 ARG C 36 -1 O ARG C 36 N SER C 29 SHEET 3 K12 ARG C 55 GLU C 57 1 O ARG C 55 N ILE C 35 SHEET 4 K12 LYS C 79 SER C 81 1 O SER C 81 N LEU C 56 SHEET 5 K12 TYR C 403 ASP C 405 1 O TYR C 403 N LEU C 80 SHEET 6 K12 HIS C 426 ASP C 428 1 O HIS C 426 N LEU C 404 SHEET 7 K12 TYR C 451 ASP C 453 1 O TYR C 451 N LEU C 427 SHEET 8 K12 VAL C 475 LYS C 477 1 O LYS C 477 N LEU C 452 SHEET 9 K12 PHE C 500 ASP C 502 1 O PHE C 500 N LEU C 476 SHEET 10 K12 VAL C 524 ASN C 526 1 O ASN C 526 N LEU C 501 SHEET 11 K12 VAL C 548 ASP C 550 1 O ASP C 550 N LEU C 525 SHEET 12 K12 PHE C 573 ASN C 575 1 O PHE C 573 N LEU C 549 SHEET 1 L 3 PHE C 387 SER C 392 0 SHEET 2 L 3 VAL C 411 LEU C 419 1 O THR C 413 N PHE C 387 SHEET 3 L 3 ASN C 433 LYS C 435 1 O LYS C 435 N ILE C 412 SHEET 1 M 2 ARG C 460 VAL C 461 0 SHEET 2 M 2 SER C 482 PHE C 483 1 O SER C 482 N VAL C 461 SHEET 1 N 2 PHE C 487 LEU C 488 0 SHEET 2 N 2 GLN C 510 LEU C 511 1 O GLN C 510 N LEU C 488 SHEET 1 O 2 PHE C 581 ALA C 582 0 SHEET 2 O 2 CYS C 609 THR C 611 1 O ALA C 610 N PHE C 581 SHEET 1 P12 SER D 29 SER D 31 0 SHEET 2 P12 GLU D 34 ARG D 36 -1 O ARG D 36 N SER D 29 SHEET 3 P12 ARG D 55 GLU D 57 1 O ARG D 55 N ILE D 35 SHEET 4 P12 LYS D 79 SER D 81 1 O SER D 81 N LEU D 56 SHEET 5 P12 TYR D 403 ASP D 405 1 O TYR D 403 N LEU D 80 SHEET 6 P12 HIS D 426 ASP D 428 1 O HIS D 426 N LEU D 404 SHEET 7 P12 TYR D 451 ASP D 453 1 O TYR D 451 N LEU D 427 SHEET 8 P12 VAL D 475 LYS D 477 1 O LYS D 477 N LEU D 452 SHEET 9 P12 PHE D 500 ASP D 502 1 O PHE D 500 N LEU D 476 SHEET 10 P12 VAL D 524 ASN D 526 1 O ASN D 526 N LEU D 501 SHEET 11 P12 VAL D 548 ASP D 550 1 O ASP D 550 N LEU D 525 SHEET 12 P12 PHE D 573 ASN D 575 1 O PHE D 573 N LEU D 549 SHEET 1 Q 3 PHE D 387 SER D 392 0 SHEET 2 Q 3 VAL D 411 LEU D 419 1 O THR D 413 N PHE D 387 SHEET 3 Q 3 ASN D 433 LYS D 435 1 O LYS D 435 N ILE D 412 SHEET 1 R 2 ARG D 460 VAL D 461 0 SHEET 2 R 2 SER D 482 PHE D 483 1 O SER D 482 N VAL D 461 SHEET 1 S 2 PHE D 487 LEU D 488 0 SHEET 2 S 2 GLN D 510 LEU D 511 1 O GLN D 510 N LEU D 488 SHEET 1 T 2 PHE D 581 ALA D 582 0 SHEET 2 T 2 CYS D 609 THR D 611 1 O ALA D 610 N PHE D 581 SSBOND 1 CYS A 24 CYS A 30 1555 1555 2.04 SSBOND 2 CYS A 28 CYS A 37 1555 1555 2.03 SSBOND 3 CYS A 390 CYS A 391 1555 1555 2.03 SSBOND 4 CYS A 583 CYS A 609 1555 1555 2.03 SSBOND 5 CYS A 585 CYS A 627 1555 1555 2.03 SSBOND 6 CYS B 24 CYS B 30 1555 1555 2.04 SSBOND 7 CYS B 28 CYS B 37 1555 1555 2.03 SSBOND 8 CYS B 390 CYS B 391 1555 1555 2.03 SSBOND 9 CYS B 583 CYS B 609 1555 1555 2.03 SSBOND 10 CYS B 585 CYS B 627 1555 1555 2.03 SSBOND 11 CYS C 24 CYS C 30 1555 1555 2.04 SSBOND 12 CYS C 28 CYS C 37 1555 1555 2.03 SSBOND 13 CYS C 390 CYS C 391 1555 1555 2.03 SSBOND 14 CYS C 583 CYS C 609 1555 1555 2.04 SSBOND 15 CYS C 585 CYS C 627 1555 1555 2.03 SSBOND 16 CYS D 24 CYS D 30 1555 1555 2.04 SSBOND 17 CYS D 28 CYS D 37 1555 1555 2.03 SSBOND 18 CYS D 390 CYS D 391 1555 1555 2.03 SSBOND 19 CYS D 583 CYS D 609 1555 1555 2.04 SSBOND 20 CYS D 585 CYS D 627 1555 1555 2.03 LINK ND2 ASN A 497 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN A 526 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN A 575 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN A 624 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 497 C1 NAG L 1 1555 1555 1.45 LINK ND2 ASN B 526 C1 NAG J 1 1555 1555 1.44 LINK ND2 ASN B 575 C1 NAG I 1 1555 1555 1.45 LINK ND2 ASN B 624 C1 NAG K 1 1555 1555 1.45 LINK ND2 ASN C 497 C1 NAG P 1 1555 1555 1.45 LINK ND2 ASN C 526 C1 NAG N 1 1555 1555 1.45 LINK ND2 ASN C 575 C1 NAG M 1 1555 1555 1.45 LINK ND2 ASN C 624 C1 NAG O 1 1555 1555 1.45 LINK ND2 ASN D 497 C1 NAG T 1 1555 1555 1.45 LINK ND2 ASN D 526 C1 NAG R 1 1555 1555 1.44 LINK ND2 ASN D 575 C1 NAG Q 1 1555 1555 1.45 LINK ND2 ASN D 624 C1 NAG S 1 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O6 NAG G 1 C1 FUL G 4 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.45 LINK O6 NAG K 1 C1 FUL K 4 1555 1555 1.44 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.45 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.45 LINK O4 NAG M 1 C1 NAG M 2 1555 1555 1.44 LINK O4 NAG M 2 C1 BMA M 3 1555 1555 1.45 LINK O4 NAG N 1 C1 NAG N 2 1555 1555 1.44 LINK O4 NAG O 1 C1 NAG O 2 1555 1555 1.45 LINK O6 NAG O 1 C1 FUL O 4 1555 1555 1.44 LINK O4 NAG O 2 C1 BMA O 3 1555 1555 1.45 LINK O4 NAG P 1 C1 NAG P 2 1555 1555 1.45 LINK O4 NAG Q 1 C1 NAG Q 2 1555 1555 1.44 LINK O4 NAG Q 2 C1 BMA Q 3 1555 1555 1.45 LINK O4 NAG R 1 C1 NAG R 2 1555 1555 1.44 LINK O4 NAG S 1 C1 NAG S 2 1555 1555 1.45 LINK O6 NAG S 1 C1 FUL S 4 1555 1555 1.44 LINK O4 NAG S 2 C1 BMA S 3 1555 1555 1.45 LINK O4 NAG T 1 C1 NAG T 2 1555 1555 1.45 CISPEP 1 CYS A 390 CYS A 391 0 -4.10 CISPEP 2 THR A 611 PRO A 612 0 -2.51 CISPEP 3 CYS B 390 CYS B 391 0 -3.36 CISPEP 4 THR B 611 PRO B 612 0 -2.16 CISPEP 5 CYS C 390 CYS C 391 0 -4.03 CISPEP 6 THR C 611 PRO C 612 0 -2.74 CISPEP 7 CYS D 390 CYS D 391 0 -4.18 CISPEP 8 THR D 611 PRO D 612 0 -2.13 CRYST1 49.787 67.971 122.779 89.86 89.96 90.01 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020086 0.000004 -0.000014 0.00000 SCALE2 0.000000 0.014712 -0.000036 0.00000 SCALE3 0.000000 0.000000 0.008145 0.00000