PDB Short entry for 2Z82 HEADER IMMUNE SYSTEM 30-AUG-07 2Z82 TITLE CRYSTAL STRUCTURE OF THE TLR1-TLR2 HETERODIMER INDUCED BY BINDING OF A TITLE 2 TRI-ACYLATED LIPOPEPTIDE CAVEAT 2Z82 NAG A 821 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 2, VARIABLE LYMPHOCYTE RECEPTOR B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TLR2, UNP RESIDUES 27-506(MOUSE), VLRB.61, UNP RESIDUES COMPND 5 133-199(INSHORE HAGFISH); COMPND 6 SYNONYM: CD282 ANTIGEN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS, EPTATRETUS BURGERI; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE, INSHORE HAGFISH; SOURCE 4 ORGANISM_TAXID: 10090, 7764; SOURCE 5 STRAIN: ,; SOURCE 6 GENE: TLR2, VLRB; SOURCE 7 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 8 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: HI-5; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PVL1393 KEYWDS TLR2, PAM2CSK4, LIPOPEPTIDE, INNATE IMMUNITY, CYTOPLASMIC VESICLE, KEYWDS 2 GLYCOPROTEIN, IMMUNE RESPONSE, INFLAMMATORY RESPONSE, LEUCINE-RICH KEYWDS 3 REPEAT, MEMBRANE, RECEPTOR, TRANSMEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.O.LEE,M.S.JIN,S.E.KIM,J.Y.HEO REVDAT 6 29-JUL-20 2Z82 1 CAVEAT COMPND REMARK SEQADV REVDAT 6 2 1 HET HETNAM FORMUL LINK REVDAT 6 3 1 SITE ATOM REVDAT 5 16-AUG-17 2Z82 1 SOURCE REMARK REVDAT 4 13-JUL-11 2Z82 1 VERSN REVDAT 3 24-FEB-09 2Z82 1 VERSN REVDAT 2 16-OCT-07 2Z82 1 LINK REVDAT 1 02-OCT-07 2Z82 0 JRNL AUTH M.S.JIN,S.E.KIM,J.Y.HEO,M.E.LEE,H.M.KIM,S.G.PAIK,H.LEE, JRNL AUTH 2 J.O.LEE JRNL TITL CRYSTAL STRUCTURE OF THE TLR1-TLR2 HETERODIMER INDUCED BY JRNL TITL 2 BINDING OF A TRI-ACYLATED LIPOPEPTIDE JRNL REF CELL(CAMBRIDGE,MASS.) V. 130 1071 2007 JRNL REFN ISSN 0092-8674 JRNL PMID 17889651 JRNL DOI 10.1016/J.CELL.2007.09.008 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 195675.320 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 18898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 921 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 109 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.035 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4353 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 126 REMARK 3 SOLVENT ATOMS : 86 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.88000 REMARK 3 B22 (A**2) : -10.23000 REMARK 3 B33 (A**2) : 16.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.42 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.020 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 13.54 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z82 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000027638. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36300 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M TRIS-HCL REMARK 280 PH8.5 AND 34% PEG1000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.32500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.45200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.66700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.45200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.32500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.66700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 540 C - N - CA ANGL. DEV. = -13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 40 65.04 33.55 REMARK 500 LYS A 63 50.02 -107.42 REMARK 500 CYS A 75 78.00 -62.22 REMARK 500 SER A 85 49.81 37.74 REMARK 500 ARG A 87 50.11 -95.60 REMARK 500 ASN A 110 -164.45 -120.50 REMARK 500 LEU A 123 60.16 -110.52 REMARK 500 PRO A 135 31.19 -71.60 REMARK 500 ARG A 236 34.52 -97.55 REMARK 500 PRO A 243 40.42 -90.17 REMARK 500 ASP A 245 152.23 -49.44 REMARK 500 GLU A 246 101.60 -40.40 REMARK 500 ILE A 276 53.43 -114.02 REMARK 500 ASN A 296 76.37 -159.60 REMARK 500 SER A 298 -158.85 -75.83 REMARK 500 ASP A 327 100.90 -37.56 REMARK 500 LEU A 328 68.38 -65.73 REMARK 500 ASN A 370 -157.60 -129.08 REMARK 500 ALA A 381 51.38 -103.50 REMARK 500 CYS A 382 -178.06 -66.63 REMARK 500 TRP A 386 71.85 31.13 REMARK 500 SER A 395 -83.49 -42.07 REMARK 500 ASN A 397 -157.79 -129.09 REMARK 500 PRO A 429 -171.47 -68.28 REMARK 500 ASN A 467 -145.19 -123.89 REMARK 500 ASN A 487 -158.68 -144.96 REMARK 500 ASN A 509 -151.72 -128.02 REMARK 500 THR A 523 5.21 -69.62 REMARK 500 HIS A 531 170.41 -57.66 REMARK 500 ARG A 541 -72.58 -58.76 REMARK 500 ILE A 542 7.42 -54.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETROGEN PDJ IS LINKED WITH FIVE AMINO ACID RESIDUES (SKKKK), REMARK 600 WHICH ARE NOT VISIBLE REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z7X RELATED DB: PDB REMARK 900 RELATED ID: 2Z80 RELATED DB: PDB REMARK 900 RELATED ID: 2Z81 RELATED DB: PDB DBREF 2Z82 A 27 506 UNP Q9QUN7 TLR2_MOUSE 27 506 DBREF 2Z82 A 509 575 UNP Q4G1L2 Q4G1L2_EPTBU 133 199 SEQADV 2Z82 SER A 507 UNP Q9QUN7 LINKER SEQADV 2Z82 ARG A 508 UNP Q9QUN7 LINKER SEQRES 1 A 549 SER LEU SER CYS ASP ALA SER GLY VAL CYS ASP GLY ARG SEQRES 2 A 549 SER ARG SER PHE THR SER ILE PRO SER GLY LEU THR ALA SEQRES 3 A 549 ALA MET LYS SER LEU ASP LEU SER PHE ASN LYS ILE THR SEQRES 4 A 549 TYR ILE GLY HIS GLY ASP LEU ARG ALA CYS ALA ASN LEU SEQRES 5 A 549 GLN VAL LEU ILE LEU LYS SER SER ARG ILE ASN THR ILE SEQRES 6 A 549 GLU GLY ASP ALA PHE TYR SER LEU GLY SER LEU GLU HIS SEQRES 7 A 549 LEU ASP LEU SER ASP ASN HIS LEU SER SER LEU SER SER SEQRES 8 A 549 SER TRP PHE GLY PRO LEU SER SER LEU LYS TYR LEU ASN SEQRES 9 A 549 LEU MET GLY ASN PRO TYR GLN THR LEU GLY VAL THR SER SEQRES 10 A 549 LEU PHE PRO ASN LEU THR ASN LEU GLN THR LEU ARG ILE SEQRES 11 A 549 GLY ASN VAL GLU THR PHE SER GLU ILE ARG ARG ILE ASP SEQRES 12 A 549 PHE ALA GLY LEU THR SER LEU ASN GLU LEU GLU ILE LYS SEQRES 13 A 549 ALA LEU SER LEU ARG ASN TYR GLN SER GLN SER LEU LYS SEQRES 14 A 549 SER ILE ARG ASP ILE HIS HIS LEU THR LEU HIS LEU SER SEQRES 15 A 549 GLU SER ALA PHE LEU LEU GLU ILE PHE ALA ASP ILE LEU SEQRES 16 A 549 SER SER VAL ARG TYR LEU GLU LEU ARG ASP THR ASN LEU SEQRES 17 A 549 ALA ARG PHE GLN PHE SER PRO LEU PRO VAL ASP GLU VAL SEQRES 18 A 549 SER SER PRO MET LYS LYS LEU ALA PHE ARG GLY SER VAL SEQRES 19 A 549 LEU THR ASP GLU SER PHE ASN GLU LEU LEU LYS LEU LEU SEQRES 20 A 549 ARG TYR ILE LEU GLU LEU SER GLU VAL GLU PHE ASP ASP SEQRES 21 A 549 CYS THR LEU ASN GLY LEU GLY ASP PHE ASN PRO SER GLU SEQRES 22 A 549 SER ASP VAL VAL SER GLU LEU GLY LYS VAL GLU THR VAL SEQRES 23 A 549 THR ILE ARG ARG LEU HIS ILE PRO GLN PHE TYR LEU PHE SEQRES 24 A 549 TYR ASP LEU SER THR VAL TYR SER LEU LEU GLU LYS VAL SEQRES 25 A 549 LYS ARG ILE THR VAL GLU ASN SER LYS VAL PHE LEU VAL SEQRES 26 A 549 PRO CYS SER PHE SER GLN HIS LEU LYS SER LEU GLU PHE SEQRES 27 A 549 LEU ASP LEU SER GLU ASN LEU MET VAL GLU GLU TYR LEU SEQRES 28 A 549 LYS ASN SER ALA CYS LYS GLY ALA TRP PRO SER LEU GLN SEQRES 29 A 549 THR LEU VAL LEU SER GLN ASN HIS LEU ARG SER MET GLN SEQRES 30 A 549 LYS THR GLY GLU ILE LEU LEU THR LEU LYS ASN LEU THR SEQRES 31 A 549 SER LEU ASP ILE SER ARG ASN THR PHE HIS PRO MET PRO SEQRES 32 A 549 ASP SER CYS GLN TRP PRO GLU LYS MET ARG PHE LEU ASN SEQRES 33 A 549 LEU SER SER THR GLY ILE ARG VAL VAL LYS THR CYS ILE SEQRES 34 A 549 PRO GLN THR LEU GLU VAL LEU ASP VAL SER ASN ASN ASN SEQRES 35 A 549 LEU ASP SER PHE SER LEU PHE LEU PRO ARG LEU GLN GLU SEQRES 36 A 549 LEU TYR ILE SER ARG ASN LYS LEU LYS THR LEU PRO ASP SEQRES 37 A 549 ALA SER LEU PHE PRO VAL LEU LEU VAL MET LYS ILE SER SEQRES 38 A 549 ARG ASN GLN LEU LYS SER VAL PRO ASP GLY ILE PHE ASP SEQRES 39 A 549 ARG LEU THR SER LEU GLN LYS ILE TRP LEU HIS THR ASN SEQRES 40 A 549 PRO TRP ASP CYS SER CYS PRO ARG ILE ASP TYR LEU SER SEQRES 41 A 549 ARG TRP LEU ASN LYS ASN SER GLN LYS GLU GLN GLY SER SEQRES 42 A 549 ALA LYS CYS SER GLY SER GLY LYS PRO VAL ARG SER ILE SEQRES 43 A 549 ILE CYS PRO MODRES 2Z82 ASN A 147 ASN GLYCOSYLATION SITE MODRES 2Z82 ASN A 414 ASN GLYCOSYLATION SITE MODRES 2Z82 ASN A 442 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET NAG A 821 14 HET PDJ A 1 45 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM PDJ (2R)-3-{[(2R)-2-AMINO-3-HYDROXYPROPYL]THIO}PROPANE-1,2- HETNAM 2 PDJ DIYL DIHEXADECANOATE FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 3 MAN C6 H12 O6 FORMUL 5 PDJ C38 H75 N O5 S FORMUL 6 HOH *86(H2 O) HELIX 1 1 SER A 116 GLY A 121 1 6 HELIX 2 2 PHE A 212 LEU A 221 1 10 HELIX 3 3 ASP A 263 LEU A 272 1 10 HELIX 4 4 LEU A 273 ILE A 276 5 4 HELIX 5 5 GLN A 321 PHE A 325 5 5 HELIX 6 6 PRO A 352 LEU A 359 1 8 HELIX 7 7 VAL A 373 ALA A 381 1 9 HELIX 8 8 SER A 401 LEU A 409 1 9 HELIX 9 9 LEU A 410 LEU A 412 5 3 HELIX 10 10 ASP A 494 PHE A 498 5 5 HELIX 11 11 ILE A 518 LEU A 522 5 5 HELIX 12 12 ILE A 542 ASN A 552 1 11 HELIX 13 13 PRO A 568 ILE A 572 5 5 SHEET 1 A23 SER A 29 CYS A 30 0 SHEET 2 A23 VAL A 35 ASP A 37 -1 O ASP A 37 N SER A 29 SHEET 3 A23 SER A 56 ASP A 58 1 O SER A 56 N CYS A 36 SHEET 4 A23 VAL A 80 ILE A 82 1 O VAL A 80 N LEU A 57 SHEET 5 A23 HIS A 104 ASP A 106 1 O HIS A 104 N LEU A 81 SHEET 6 A23 TYR A 128 ASN A 130 1 O TYR A 128 N LEU A 105 SHEET 7 A23 THR A 153 ASN A 158 1 O THR A 153 N LEU A 129 SHEET 8 A23 SER A 175 ALA A 183 1 O LYS A 182 N ILE A 156 SHEET 9 A23 ASP A 199 LEU A 207 1 O THR A 204 N ILE A 181 SHEET 10 A23 TYR A 226 ARG A 230 1 O GLU A 228 N LEU A 203 SHEET 11 A23 LYS A 253 ARG A 257 1 O ALA A 255 N LEU A 229 SHEET 12 A23 GLU A 281 ASP A 285 1 O ASP A 285 N PHE A 256 SHEET 13 A23 THR A 311 ARG A 315 1 O ARG A 315 N PHE A 284 SHEET 14 A23 ARG A 340 GLU A 344 1 O THR A 342 N ILE A 314 SHEET 15 A23 PHE A 364 ASP A 366 1 O ASP A 366 N ILE A 341 SHEET 16 A23 THR A 391 VAL A 393 1 O VAL A 393 N LEU A 365 SHEET 17 A23 SER A 417 ASP A 419 1 O ASP A 419 N LEU A 392 SHEET 18 A23 PHE A 440 ASN A 442 1 O ASN A 442 N LEU A 418 SHEET 19 A23 VAL A 461 ASP A 463 1 O VAL A 461 N LEU A 441 SHEET 20 A23 GLU A 481 TYR A 483 1 O TYR A 483 N LEU A 462 SHEET 21 A23 VAL A 503 LYS A 505 1 O VAL A 503 N LEU A 482 SHEET 22 A23 LYS A 527 TRP A 529 1 O TRP A 529 N MET A 504 SHEET 23 A23 GLU A 556 GLN A 557 1 O GLN A 557 N ILE A 528 SHEET 1 B 2 TYR A 66 ILE A 67 0 SHEET 2 B 2 THR A 90 ILE A 91 1 O THR A 90 N ILE A 67 SHEET 1 C 2 GLU A 164 ILE A 165 0 SHEET 2 C 2 ASN A 188 TYR A 189 1 O ASN A 188 N ILE A 165 SHEET 1 D 2 VAL A 260 THR A 262 0 SHEET 2 D 2 THR A 288 ASN A 290 1 O THR A 288 N LEU A 261 SSBOND 1 CYS A 30 CYS A 36 1555 1555 2.04 SSBOND 2 CYS A 353 CYS A 382 1555 1555 2.04 SSBOND 3 CYS A 432 CYS A 454 1555 1555 2.04 SSBOND 4 CYS A 537 CYS A 562 1555 1555 2.03 SSBOND 5 CYS A 539 CYS A 574 1555 1555 2.03 LINK ND2 ASN A 147 C1 NAG A 821 1555 1555 1.46 LINK ND2 ASN A 414 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 442 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.40 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.40 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.40 CRYST1 84.650 81.334 90.904 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011813 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012295 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011001 0.00000