PDB Short entry for 3A3Z
HEADER    GENE REGULATION                         25-JUN-09   3A3Z              
TITLE     CRYSTAL STRUCTURE OF THE HUMAN VDR LIGAND BINDING DOMAIN BOUND TO THE 
TITLE    2 SYNTHETIC AGONIST COMPOUND 2ALPHA-METHYL-AMCR277A(C23S)              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: VITAMIN D3 RECEPTOR;                                       
COMPND   3 CHAIN: X;                                                            
COMPND   4 FRAGMENT: LIGAND BINDING DOMAIN, UNP RESIDUES 118-427;               
COMPND   5 SYNONYM: VDR, 1,25-DIHYDROXYVITAMIN D3 RECEPTOR, NUCLEAR RECEPTOR    
COMPND   6 SUBFAMILY 1 GROUP I MEMBER 1;                                        
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3);                                
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET28B                                    
KEYWDS    TRANSCRIPTION, STRUCTURAL GENOMICS, SPINE2, STRUCTURAL PROTEOMICS IN  
KEYWDS   2 EUROPE 2, GENE REGULATION, SPINE-2                                   
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.SATO,P.ANTONY,T.HUET,R.SIGUEIRO,N.ROCHEL,D.MORAS,STRUCTURAL         
AUTHOR   2 PROTEOMICS IN EUROPE 2 (SPINE-2)                                     
REVDAT   3   01-NOV-23 3A3Z    1       KEYWDS AUTHOR REMARK SEQADV              
REVDAT   2   20-NOV-13 3A3Z    1       JRNL   VERSN                             
REVDAT   1   02-FEB-10 3A3Z    0                                                
JRNL        AUTH   P.ANTONY,R.SIGUEIRO,T.HUET,Y.SATO,N.RAMALANJAONA,            
JRNL        AUTH 2 L.C.RODRIGUES,A.MOURINO,D.MORAS,N.ROCHEL                     
JRNL        TITL   STRUCTURE-FUNCTION RELATIONSHIPS AND CRYSTAL STRUCTURES OF   
JRNL        TITL 2 THE VITAMIN D RECEPTOR BOUND 2 ALPHA-METHYL-(20S,23S)- AND 2 
JRNL        TITL 3 ALPHA-METHYL-(20S,23R)-EPOXYMETHANO-1                        
JRNL        TITL 4 ALPHA,25-DIHYDROXYVITAMIN D3                                 
JRNL        REF    J.MED.CHEM.                   V.  53  1159 2010              
JRNL        REFN                   ISSN 0022-2623                               
JRNL        PMID   20070104                                                     
JRNL        DOI    10.1021/JM9014636                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.72 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 30.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 96.5                           
REMARK   3   NUMBER OF REFLECTIONS             : 31149                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.179                           
REMARK   3   R VALUE            (WORKING SET) : 0.177                           
REMARK   3   FREE R VALUE                     : 0.209                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1664                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.72                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.77                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 1712                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 73.79                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2300                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 95                           
REMARK   3   BIN FREE R VALUE                    : 0.2840                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2026                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 43                                      
REMARK   3   SOLVENT ATOMS            : 447                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 12.52                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.03000                                             
REMARK   3    B22 (A**2) : 0.22000                                              
REMARK   3    B33 (A**2) : -0.19000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.110         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.107         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.064         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.917         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.948                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.927                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2190 ; 0.007 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  2988 ; 1.110 ; 2.010       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   281 ; 4.029 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):    95 ;33.374 ;24.316       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   409 ;10.997 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    14 ;15.355 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   345 ; 0.072 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  1616 ; 0.003 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  1059 ; 0.180 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  1547 ; 0.295 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   312 ; 0.075 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    56 ; 0.116 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    66 ; 0.069 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1382 ; 0.443 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2162 ; 0.697 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   910 ; 1.062 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   813 ; 1.656 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3A3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUN-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000028781.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 28-FEB-09                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID23-2                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.87260                            
REMARK 200  MONOCHROMATOR                  : HORIZONTALLY DIFFRACTING           
REMARK 200                                   MONOCHROMATOR, SI(111)             
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 225 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 32842                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.700                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.9                               
REMARK 200  DATA REDUNDANCY                : 2.500                              
REMARK 200  R MERGE                    (I) : 0.08300                            
REMARK 200  R SYM                      (I) : 0.08300                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 10.4000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.76                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 95.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.20                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.33700                            
REMARK 200  R SYM FOR SHELL            (I) : 0.33700                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: REFMAC 5.2.0019                                       
REMARK 200 STARTING MODEL: PDB ENTRY 1DB1                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 52.94                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM TRIS, 100MM NACL, 1NM TCEP, 0.05M   
REMARK 280  MES, 0.7M AMMONIUM SULFATE, PH 6.0, VAPOR DIFFUSION, SITTING        
REMARK 280  DROP, TEMPERATURE 277K                                              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       22.64850            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       66.54600            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       25.84400            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       66.54600            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       22.64850            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       25.84400            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: X                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY X   114                                                      
REMARK 465     SER X   115                                                      
REMARK 465     HIS X   116                                                      
REMARK 465     MET X   117                                                      
REMARK 465     ASN X   424                                                      
REMARK 465     GLU X   425                                                      
REMARK 465     ILE X   426                                                      
REMARK 465     SER X   427                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP X 161       51.24   -147.58                                   
REMARK 500    ASP X 283       15.70   -142.96                                   
REMARK 500    GLN X 291      -48.55    -28.63                                   
REMARK 500    ASP X 342       58.58    -99.02                                   
REMARK 500    LEU X 414     -156.70   -102.61                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2MV X 1                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 428                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 2                   
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1DB1   RELATED DB: PDB                                   
REMARK 900 1DB1 CONTAINS THE HUMAN VDR LBD BOUND TO 1 ALPHA, 25-                
REMARK 900 DIHYDROXYVITAMIN D3 (CALCITRIOL)                                     
REMARK 900 RELATED ID: 2HB8   RELATED DB: PDB                                   
REMARK 900 2HB8 CONTAINS THE HUMAN VDR LBD BOUND TO 2ALPHA-METHYL CALCITRIOL    
REMARK 900 RELATED ID: 3CS4   RELATED DB: PDB                                   
REMARK 900 3CS4 CONTAINS THE HUMAN VDR LBD BOUND TO AMCR277A(C23S)              
REMARK 900 RELATED ID: 3A40   RELATED DB: PDB                                   
REMARK 900 3A40 CONTAINS THE HUMAN VDR LBD BOUND TO 2ME-AMCR277B(C23R)          
DBREF  3A3Z X  118   427  UNP    P11473   VDR_HUMAN      118    427             
SEQADV 3A3Z GLY X  114  UNP  P11473              EXPRESSION TAG                 
SEQADV 3A3Z SER X  115  UNP  P11473              EXPRESSION TAG                 
SEQADV 3A3Z HIS X  116  UNP  P11473              EXPRESSION TAG                 
SEQADV 3A3Z MET X  117  UNP  P11473              EXPRESSION TAG                 
SEQADV 3A3Z     X       UNP  P11473    SER   165 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    HIS   166 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    PRO   167 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   168 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ARG   169 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    PRO   170 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASN   171 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   172 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ARG   173 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    HIS   174 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    THR   175 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    PRO   176 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   177 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    PHE   178 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   179 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    GLY   180 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   181 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   182 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   183 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   184 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   185 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    CYS   186 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   187 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   188 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    HIS   189 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    CYS   190 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ILE   191 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    THR   192 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   193 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   194 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   195 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    MET   196 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    MET   197 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   198 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   199 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   200 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   201 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    PHE   202 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   203 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASN   204 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    LEU   205 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   206 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    LEU   207 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   208 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    GLU   209 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    GLU   210 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   211 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    SER   212 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   213 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    ASP   214 DELETION                       
SEQADV 3A3Z     X       UNP  P11473    PRO   215 DELETION                       
SEQRES   1 X  263  GLY SER HIS MET ASP SER LEU ARG PRO LYS LEU SER GLU          
SEQRES   2 X  263  GLU GLN GLN ARG ILE ILE ALA ILE LEU LEU ASP ALA HIS          
SEQRES   3 X  263  HIS LYS THR TYR ASP PRO THR TYR SER ASP PHE CYS GLN          
SEQRES   4 X  263  PHE ARG PRO PRO VAL ARG VAL ASN ASP GLY GLY GLY SER          
SEQRES   5 X  263  VAL THR LEU GLU LEU SER GLN LEU SER MET LEU PRO HIS          
SEQRES   6 X  263  LEU ALA ASP LEU VAL SER TYR SER ILE GLN LYS VAL ILE          
SEQRES   7 X  263  GLY PHE ALA LYS MET ILE PRO GLY PHE ARG ASP LEU THR          
SEQRES   8 X  263  SER GLU ASP GLN ILE VAL LEU LEU LYS SER SER ALA ILE          
SEQRES   9 X  263  GLU VAL ILE MET LEU ARG SER ASN GLU SER PHE THR MET          
SEQRES  10 X  263  ASP ASP MET SER TRP THR CYS GLY ASN GLN ASP TYR LYS          
SEQRES  11 X  263  TYR ARG VAL SER ASP VAL THR LYS ALA GLY HIS SER LEU          
SEQRES  12 X  263  GLU LEU ILE GLU PRO LEU ILE LYS PHE GLN VAL GLY LEU          
SEQRES  13 X  263  LYS LYS LEU ASN LEU HIS GLU GLU GLU HIS VAL LEU LEU          
SEQRES  14 X  263  MET ALA ILE CYS ILE VAL SER PRO ASP ARG PRO GLY VAL          
SEQRES  15 X  263  GLN ASP ALA ALA LEU ILE GLU ALA ILE GLN ASP ARG LEU          
SEQRES  16 X  263  SER ASN THR LEU GLN THR TYR ILE ARG CYS ARG HIS PRO          
SEQRES  17 X  263  PRO PRO GLY SER HIS LEU LEU TYR ALA LYS MET ILE GLN          
SEQRES  18 X  263  LYS LEU ALA ASP LEU ARG SER LEU ASN GLU GLU HIS SER          
SEQRES  19 X  263  LYS GLN TYR ARG CYS LEU SER PHE GLN PRO GLU CYS SER          
SEQRES  20 X  263  MET LYS LEU THR PRO LEU VAL LEU GLU VAL PHE GLY ASN          
SEQRES  21 X  263  GLU ILE SER                                                  
HET    2MV  X   1      33                                                       
HET    SO4  X 428       5                                                       
HET    SO4  X   2       5                                                       
HETNAM     2MV (1S,2S,3R,5Z,7E,14BETA,17ALPHA)-17-[(2S,4S)-4-(2-                
HETNAM   2 2MV  HYDROXY-2-METHYLPROPYL)-2-METHYLTETRAHYDROFURAN-2-YL]-          
HETNAM   3 2MV  2-METHYL-9,10-SECOANDROSTA-5,7,10-TRIENE-1,3-DIOL               
HETNAM     SO4 SULFATE ION                                                      
FORMUL   2  2MV    C29 H46 O4                                                   
FORMUL   3  SO4    2(O4 S 2-)                                                   
FORMUL   5  HOH   *447(H2 O)                                                    
HELIX    1   1 SER X  125  TYR X  143  1                                  19    
HELIX    2   2 ASP X  149  PHE X  153  5                                   5    
HELIX    3   3 SER X  216  LEU X  224  1                                   9    
HELIX    4   4 MET X  226  MET X  247  1                                  22    
HELIX    5   5 GLY X  250  LEU X  254  5                                   5    
HELIX    6   6 THR X  255  SER X  275  1                                  21    
HELIX    7   7 ASN X  290  ASP X  292  5                                   3    
HELIX    8   8 ARG X  296  LYS X  302  1                                   7    
HELIX    9   9 SER X  306  LYS X  322  1                                  17    
HELIX   10  10 HIS X  326  VAL X  339  1                                  14    
HELIX   11  11 ASP X  348  HIS X  371  1                                  24    
HELIX   12  12 LEU X  378  SER X  405  1                                  28    
HELIX   13  13 GLU X  409  LEU X  414  5                                   6    
HELIX   14  14 THR X  415  GLY X  423  1                                   9    
SHEET    1   A 3 PHE X 279  THR X 280  0                                        
SHEET    2   A 3 SER X 285  THR X 287 -1  O  SER X 285   N  THR X 280           
SHEET    3   A 3 LYS X 294  TYR X 295 -1  O  TYR X 295   N  TRP X 286           
CISPEP   1 PRO X  373    PRO X  374          0        -1.78                     
SITE     1 AC1 11 TYR X 143  LEU X 227  VAL X 234  SER X 237                    
SITE     2 AC1 11 ARG X 274  SER X 275  SER X 278  TRP X 286                    
SITE     3 AC1 11 CYS X 288  HIS X 305  HIS X 397                               
SITE     1 AC2 10 HOH X  32  HOH X 200  PRO X 408  GLU X 409                    
SITE     2 AC2 10 CYS X 410  SER X 411  MET X 412  HOH X 498                    
SITE     3 AC2 10 HOH X 584  HOH X 683                                          
SITE     1 AC3  4 THR X 280  MET X 281  LYS X 321  HOH X 438                    
CRYST1   45.297   51.688  133.092  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022077  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.019347  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007514        0.00000