PDB Short entry for 3B1D HEADER LYASE 29-JUN-11 3B1D TITLE CRYSTAL STRUCTURE OF BETAC-S LYASE FROM STREPTOCOCCUS ANGINOSUS IN TITLE 2 COMPLEX WITH L-SERINE: EXTERNAL ALDIMINE FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETAC-S LYASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.4.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS ANGINOSUS; SOURCE 3 ORGANISM_TAXID: 1328; SOURCE 4 STRAIN: IMU102; SOURCE 5 GENE: LCD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS LYASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KEZUKA,Y.YOSHIDA,T.NONAKA REVDAT 3 11-OCT-17 3B1D 1 REMARK REVDAT 2 22-JAN-14 3B1D 1 JRNL REVDAT 1 27-JUN-12 3B1D 0 JRNL AUTH Y.KEZUKA,Y.YOSHIDA,T.NONAKA JRNL TITL STRUCTURAL INSIGHTS INTO CATALYSIS BY BETA C-S LYASE FROM JRNL TITL 2 STREPTOCOCCUS ANGINOSUS JRNL REF PROTEINS V. 80 2447 2012 JRNL REFN ISSN 0887-3585 JRNL PMID 22674431 JRNL DOI 10.1002/PROT.24129 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.KEZUKA,Y.YOSHIDA,T.NONAKA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS OF BETAC-S REMARK 1 TITL 2 LYASES FROM TWO ORAL STREPTOCOCCI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 874 2009 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19724121 REMARK 1 DOI 10.1107/S1744309109030371 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.YOSHIDA,S.ITO,T.SASAKI,M.KISHI,M.KUROTA,A.SUWABE, REMARK 1 AUTH 2 K.KUNIMATSU,H.KATO REMARK 1 TITL MOLECULAR AND ENZYMATIC CHARACTERIZATION OF BETAC-S LYASE IN REMARK 1 TITL 2 STREPTOCOCCUS CONSTELLATUS REMARK 1 REF ORAL MICROBIOL.IMMUNOL. V. 23 245 2008 REMARK 1 REFN ISSN 0902-0055 REMARK 1 PMID 18402612 REMARK 1 DOI 10.1111/J.1399-302X.2007.00419.X REMARK 1 REFERENCE 3 REMARK 1 AUTH Y.YOSHIDA,M.NEGISHI,A.AMANO,T.OHO,Y.NAKANO REMARK 1 TITL DIFFERENCES IN THE BETAC-S LYASE ACTIVITIES OF VIRIDANS REMARK 1 TITL 2 GROUP STREPTOCOCCI REMARK 1 REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 300 55 2003 REMARK 1 REFN ISSN 0006-291X REMARK 1 PMID 12480520 REMARK 1 REFERENCE 4 REMARK 1 AUTH Y.YOSHIDA,Y.NAKANO,A.AMANO,M.YOSHIMURA,H.FUKAMACHI,T.OHO, REMARK 1 AUTH 2 T.KOGA REMARK 1 TITL LCD FROM STREPTOCOCCUS ANGINOSUS ENCODES A C-S LYASE WITH REMARK 1 TITL 2 ALPHA,BETA-ELIMINATION ACTIVITY THAT DEGRADES L-CYSTEINE REMARK 1 REF MICROBIOLOGY V. 148 3961 2002 REMARK 1 REFN ISSN 0026-2617 REMARK 1 PMID 12480900 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 179903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9529 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12947 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1650 REMARK 3 BIN FREE R VALUE SET COUNT : 761 REMARK 3 BIN FREE R VALUE : 0.2090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12484 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 287 REMARK 3 SOLVENT ATOMS : 1616 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : -0.21000 REMARK 3 B33 (A**2) : -0.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.379 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13362 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 8855 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18260 ; 1.318 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 21740 ; 0.921 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1642 ; 5.842 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 668 ;35.545 ;25.150 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2243 ;11.627 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;15.596 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1990 ; 0.242 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 14796 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2600 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2737 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 9676 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 6609 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 6521 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1245 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 10 ; 0.057 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.197 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 69 ; 0.223 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 53 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7920 ; 0.620 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3142 ; 0.169 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 12894 ; 1.178 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5639 ; 2.041 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5309 ; 3.282 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3B1D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000029955. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 189945 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 36.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 14.70 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : 0.07200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : 0.24800 REMARK 200 R SYM FOR SHELL (I) : 0.24800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 8000, 0.1M HEPES PH7.5, 0.08M REMARK 280 AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.48250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.59650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.65100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.59650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.48250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.65100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 LEU B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 LEU C -1 REMARK 465 GLY C 0 REMARK 465 SER C 1 REMARK 465 SER C 2 REMARK 465 GLY D -3 REMARK 465 PRO D -2 REMARK 465 LEU D -1 REMARK 465 GLY D 0 REMARK 465 SER D 1 REMARK 465 SER D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 32 49.22 -150.92 REMARK 500 TRP A 33 -89.88 -115.61 REMARK 500 ASP A 38 45.11 -98.81 REMARK 500 LEU A 56 -29.51 71.99 REMARK 500 TYR A 58 56.96 -116.97 REMARK 500 TYR A 119 117.57 -26.46 REMARK 500 LYS A 242 69.80 60.26 REMARK 500 ALA A 310 65.61 -150.35 REMARK 500 THR A 321 166.06 68.69 REMARK 500 ALA B 32 50.49 -152.37 REMARK 500 TRP B 33 -90.48 -116.00 REMARK 500 ASP B 38 46.59 -100.51 REMARK 500 LEU B 56 -29.96 72.04 REMARK 500 TYR B 58 59.33 -113.56 REMARK 500 TYR B 119 119.87 -28.88 REMARK 500 THR B 321 165.95 66.02 REMARK 500 ALA C 32 47.56 -150.10 REMARK 500 TRP C 33 -90.76 -114.61 REMARK 500 ASP C 38 46.21 -96.86 REMARK 500 LEU C 56 -28.54 73.98 REMARK 500 TYR C 58 56.18 -116.72 REMARK 500 TYR C 119 118.57 -29.00 REMARK 500 LYS C 242 70.43 60.38 REMARK 500 THR C 321 164.48 70.00 REMARK 500 ALA D 32 51.92 -152.32 REMARK 500 TRP D 33 -88.76 -118.52 REMARK 500 ASP D 38 44.47 -98.23 REMARK 500 LEU D 56 -31.09 70.43 REMARK 500 TYR D 58 56.95 -114.48 REMARK 500 TYR D 119 118.95 -27.96 REMARK 500 LYS D 242 70.77 60.06 REMARK 500 THR D 321 165.64 68.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 35 ASP A 36 147.89 REMARK 500 ALA C 35 ASP C 36 148.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 EPE B 602 REMARK 615 EPE C 602 REMARK 615 EPE C 603 REMARK 615 EPE D 603 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 701 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 358 OG REMARK 620 2 HOH B1185 O 167.1 REMARK 620 3 HOH B 970 O 85.5 98.6 REMARK 620 4 HOH B1059 O 85.6 81.8 95.9 REMARK 620 5 HOH B 939 O 85.1 106.9 90.7 168.2 REMARK 620 6 HOH B1070 O 90.5 87.7 168.0 95.0 77.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 701 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 358 OG REMARK 620 2 HOH A1025 O 166.4 REMARK 620 3 HOH A 895 O 87.6 105.7 REMARK 620 4 HOH A1157 O 82.0 84.6 169.2 REMARK 620 5 HOH A 970 O 86.1 95.9 91.3 90.6 REMARK 620 6 HOH A1037 O 89.4 91.1 77.1 100.0 167.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 701 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 358 OG REMARK 620 2 HOH D 966 O 81.4 REMARK 620 3 HOH D 964 O 170.0 88.9 REMARK 620 4 HOH D 827 O 84.2 164.3 105.1 REMARK 620 5 HOH D1017 O 86.2 98.7 97.8 86.5 REMARK 620 6 HOH D 939 O 88.4 98.1 90.5 75.2 161.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 701 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 358 OG REMARK 620 2 HOH C1058 O 173.1 REMARK 620 3 HOH C 923 O 82.6 104.1 REMARK 620 4 HOH C 949 O 82.2 96.6 86.2 REMARK 620 5 HOH C1114 O 90.9 92.3 74.3 160.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLS A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLS B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLS C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE C 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE C 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLS D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE D 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE D 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA D 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B1C RELATED DB: PDB REMARK 900 RELATED ID: 3B1E RELATED DB: PDB DBREF 3B1D A 2 388 UNP A6BMJ3 A6BMJ3_STRAP 2 388 DBREF 3B1D B 2 388 UNP A6BMJ3 A6BMJ3_STRAP 2 388 DBREF 3B1D C 2 388 UNP A6BMJ3 A6BMJ3_STRAP 2 388 DBREF 3B1D D 2 388 UNP A6BMJ3 A6BMJ3_STRAP 2 388 SEQADV 3B1D GLY A -3 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D PRO A -2 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D LEU A -1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY A 0 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D SER A 1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY B -3 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D PRO B -2 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D LEU B -1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY B 0 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D SER B 1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY C -3 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D PRO C -2 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D LEU C -1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY C 0 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D SER C 1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY D -3 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D PRO D -2 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D LEU D -1 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D GLY D 0 UNP A6BMJ3 EXPRESSION TAG SEQADV 3B1D SER D 1 UNP A6BMJ3 EXPRESSION TAG SEQRES 1 A 392 GLY PRO LEU GLY SER SER LYS TYR ASN PHE GLN THR ALA SEQRES 2 A 392 PRO ASN ARG LEU SER HIS HIS THR TYR LYS TRP LYS GLU SEQRES 3 A 392 THR GLU THR ASP PRO GLN LEU LEU PRO ALA TRP ILE ALA SEQRES 4 A 392 ASP MET ASP PHE GLU VAL MET PRO GLU VAL LYS GLN ALA SEQRES 5 A 392 ILE HIS ASP TYR ALA GLU GLN LEU VAL TYR GLY TYR THR SEQRES 6 A 392 TYR ALA SER ASP GLU LEU LEU GLN ALA VAL LEU ASP TRP SEQRES 7 A 392 GLU LYS SER GLU HIS GLN TYR SER PHE ASP LYS GLU ASP SEQRES 8 A 392 ILE VAL PHE VAL GLU GLY VAL VAL PRO ALA ILE SER ILE SEQRES 9 A 392 ALA ILE GLN ALA PHE THR LYS GLU GLY GLU ALA VAL LEU SEQRES 10 A 392 ILE ASN SER PRO VAL TYR PRO PRO PHE ALA ARG SER VAL SEQRES 11 A 392 ARG LEU ASN ASN ARG LYS LEU VAL SER ASN SER LEU LYS SEQRES 12 A 392 GLU GLU ASN GLY LEU PHE GLN ILE ASP PHE GLU GLN LEU SEQRES 13 A 392 GLU ASN ASP ILE VAL GLU ASN ASP VAL LYS LEU TYR LEU SEQRES 14 A 392 LEU CYS ASN PRO HIS ASN PRO GLY GLY ARG VAL TRP GLU SEQRES 15 A 392 ARG GLU VAL LEU GLU GLN ILE GLY HIS LEU CYS GLN LYS SEQRES 16 A 392 HIS HIS VAL ILE LEU VAL SER ASP GLU ILE HIS GLN ASP SEQRES 17 A 392 LEU THR LEU PHE GLY HIS GLU HIS VAL SER PHE ASN THR SEQRES 18 A 392 VAL SER PRO ASP PHE LYS ASP PHE ALA LEU VAL LEU SER SEQRES 19 A 392 SER ALA THR LYS THR PHE ASN ILE ALA GLY THR LYS ASN SEQRES 20 A 392 SER TYR ALA ILE ILE GLU ASN PRO THR LEU CYS ALA GLN SEQRES 21 A 392 PHE LYS HIS GLN GLN LEU VAL ASN ASN HIS HIS GLU VAL SEQRES 22 A 392 SER SER LEU GLY TYR ILE ALA THR GLU THR ALA TYR ARG SEQRES 23 A 392 TYR GLY LYS PRO TRP LEU VAL ALA LEU LYS ALA VAL LEU SEQRES 24 A 392 GLU GLU ASN ILE GLN PHE ALA VAL GLU TYR PHE ALA GLN SEQRES 25 A 392 GLU ALA PRO ARG LEU LYS VAL MET LYS PRO GLN GLY THR SEQRES 26 A 392 TYR LEU ILE TRP LEU ASP PHE SER ASP TYR GLY LEU THR SEQRES 27 A 392 ASP ASP ALA LEU PHE THR LEU LEU HIS ASP GLN ALA LYS SEQRES 28 A 392 VAL ILE LEU ASN ARG GLY SER ASP TYR GLY SER GLU GLY SEQRES 29 A 392 GLU LEU HIS ALA ARG LEU ASN ILE ALA ALA PRO LYS SER SEQRES 30 A 392 LEU VAL GLU GLU ILE CYS LYS ARG ILE VAL CYS CYS LEU SEQRES 31 A 392 PRO LYS SEQRES 1 B 392 GLY PRO LEU GLY SER SER LYS TYR ASN PHE GLN THR ALA SEQRES 2 B 392 PRO ASN ARG LEU SER HIS HIS THR TYR LYS TRP LYS GLU SEQRES 3 B 392 THR GLU THR ASP PRO GLN LEU LEU PRO ALA TRP ILE ALA SEQRES 4 B 392 ASP MET ASP PHE GLU VAL MET PRO GLU VAL LYS GLN ALA SEQRES 5 B 392 ILE HIS ASP TYR ALA GLU GLN LEU VAL TYR GLY TYR THR SEQRES 6 B 392 TYR ALA SER ASP GLU LEU LEU GLN ALA VAL LEU ASP TRP SEQRES 7 B 392 GLU LYS SER GLU HIS GLN TYR SER PHE ASP LYS GLU ASP SEQRES 8 B 392 ILE VAL PHE VAL GLU GLY VAL VAL PRO ALA ILE SER ILE SEQRES 9 B 392 ALA ILE GLN ALA PHE THR LYS GLU GLY GLU ALA VAL LEU SEQRES 10 B 392 ILE ASN SER PRO VAL TYR PRO PRO PHE ALA ARG SER VAL SEQRES 11 B 392 ARG LEU ASN ASN ARG LYS LEU VAL SER ASN SER LEU LYS SEQRES 12 B 392 GLU GLU ASN GLY LEU PHE GLN ILE ASP PHE GLU GLN LEU SEQRES 13 B 392 GLU ASN ASP ILE VAL GLU ASN ASP VAL LYS LEU TYR LEU SEQRES 14 B 392 LEU CYS ASN PRO HIS ASN PRO GLY GLY ARG VAL TRP GLU SEQRES 15 B 392 ARG GLU VAL LEU GLU GLN ILE GLY HIS LEU CYS GLN LYS SEQRES 16 B 392 HIS HIS VAL ILE LEU VAL SER ASP GLU ILE HIS GLN ASP SEQRES 17 B 392 LEU THR LEU PHE GLY HIS GLU HIS VAL SER PHE ASN THR SEQRES 18 B 392 VAL SER PRO ASP PHE LYS ASP PHE ALA LEU VAL LEU SER SEQRES 19 B 392 SER ALA THR LYS THR PHE ASN ILE ALA GLY THR LYS ASN SEQRES 20 B 392 SER TYR ALA ILE ILE GLU ASN PRO THR LEU CYS ALA GLN SEQRES 21 B 392 PHE LYS HIS GLN GLN LEU VAL ASN ASN HIS HIS GLU VAL SEQRES 22 B 392 SER SER LEU GLY TYR ILE ALA THR GLU THR ALA TYR ARG SEQRES 23 B 392 TYR GLY LYS PRO TRP LEU VAL ALA LEU LYS ALA VAL LEU SEQRES 24 B 392 GLU GLU ASN ILE GLN PHE ALA VAL GLU TYR PHE ALA GLN SEQRES 25 B 392 GLU ALA PRO ARG LEU LYS VAL MET LYS PRO GLN GLY THR SEQRES 26 B 392 TYR LEU ILE TRP LEU ASP PHE SER ASP TYR GLY LEU THR SEQRES 27 B 392 ASP ASP ALA LEU PHE THR LEU LEU HIS ASP GLN ALA LYS SEQRES 28 B 392 VAL ILE LEU ASN ARG GLY SER ASP TYR GLY SER GLU GLY SEQRES 29 B 392 GLU LEU HIS ALA ARG LEU ASN ILE ALA ALA PRO LYS SER SEQRES 30 B 392 LEU VAL GLU GLU ILE CYS LYS ARG ILE VAL CYS CYS LEU SEQRES 31 B 392 PRO LYS SEQRES 1 C 392 GLY PRO LEU GLY SER SER LYS TYR ASN PHE GLN THR ALA SEQRES 2 C 392 PRO ASN ARG LEU SER HIS HIS THR TYR LYS TRP LYS GLU SEQRES 3 C 392 THR GLU THR ASP PRO GLN LEU LEU PRO ALA TRP ILE ALA SEQRES 4 C 392 ASP MET ASP PHE GLU VAL MET PRO GLU VAL LYS GLN ALA SEQRES 5 C 392 ILE HIS ASP TYR ALA GLU GLN LEU VAL TYR GLY TYR THR SEQRES 6 C 392 TYR ALA SER ASP GLU LEU LEU GLN ALA VAL LEU ASP TRP SEQRES 7 C 392 GLU LYS SER GLU HIS GLN TYR SER PHE ASP LYS GLU ASP SEQRES 8 C 392 ILE VAL PHE VAL GLU GLY VAL VAL PRO ALA ILE SER ILE SEQRES 9 C 392 ALA ILE GLN ALA PHE THR LYS GLU GLY GLU ALA VAL LEU SEQRES 10 C 392 ILE ASN SER PRO VAL TYR PRO PRO PHE ALA ARG SER VAL SEQRES 11 C 392 ARG LEU ASN ASN ARG LYS LEU VAL SER ASN SER LEU LYS SEQRES 12 C 392 GLU GLU ASN GLY LEU PHE GLN ILE ASP PHE GLU GLN LEU SEQRES 13 C 392 GLU ASN ASP ILE VAL GLU ASN ASP VAL LYS LEU TYR LEU SEQRES 14 C 392 LEU CYS ASN PRO HIS ASN PRO GLY GLY ARG VAL TRP GLU SEQRES 15 C 392 ARG GLU VAL LEU GLU GLN ILE GLY HIS LEU CYS GLN LYS SEQRES 16 C 392 HIS HIS VAL ILE LEU VAL SER ASP GLU ILE HIS GLN ASP SEQRES 17 C 392 LEU THR LEU PHE GLY HIS GLU HIS VAL SER PHE ASN THR SEQRES 18 C 392 VAL SER PRO ASP PHE LYS ASP PHE ALA LEU VAL LEU SER SEQRES 19 C 392 SER ALA THR LYS THR PHE ASN ILE ALA GLY THR LYS ASN SEQRES 20 C 392 SER TYR ALA ILE ILE GLU ASN PRO THR LEU CYS ALA GLN SEQRES 21 C 392 PHE LYS HIS GLN GLN LEU VAL ASN ASN HIS HIS GLU VAL SEQRES 22 C 392 SER SER LEU GLY TYR ILE ALA THR GLU THR ALA TYR ARG SEQRES 23 C 392 TYR GLY LYS PRO TRP LEU VAL ALA LEU LYS ALA VAL LEU SEQRES 24 C 392 GLU GLU ASN ILE GLN PHE ALA VAL GLU TYR PHE ALA GLN SEQRES 25 C 392 GLU ALA PRO ARG LEU LYS VAL MET LYS PRO GLN GLY THR SEQRES 26 C 392 TYR LEU ILE TRP LEU ASP PHE SER ASP TYR GLY LEU THR SEQRES 27 C 392 ASP ASP ALA LEU PHE THR LEU LEU HIS ASP GLN ALA LYS SEQRES 28 C 392 VAL ILE LEU ASN ARG GLY SER ASP TYR GLY SER GLU GLY SEQRES 29 C 392 GLU LEU HIS ALA ARG LEU ASN ILE ALA ALA PRO LYS SER SEQRES 30 C 392 LEU VAL GLU GLU ILE CYS LYS ARG ILE VAL CYS CYS LEU SEQRES 31 C 392 PRO LYS SEQRES 1 D 392 GLY PRO LEU GLY SER SER LYS TYR ASN PHE GLN THR ALA SEQRES 2 D 392 PRO ASN ARG LEU SER HIS HIS THR TYR LYS TRP LYS GLU SEQRES 3 D 392 THR GLU THR ASP PRO GLN LEU LEU PRO ALA TRP ILE ALA SEQRES 4 D 392 ASP MET ASP PHE GLU VAL MET PRO GLU VAL LYS GLN ALA SEQRES 5 D 392 ILE HIS ASP TYR ALA GLU GLN LEU VAL TYR GLY TYR THR SEQRES 6 D 392 TYR ALA SER ASP GLU LEU LEU GLN ALA VAL LEU ASP TRP SEQRES 7 D 392 GLU LYS SER GLU HIS GLN TYR SER PHE ASP LYS GLU ASP SEQRES 8 D 392 ILE VAL PHE VAL GLU GLY VAL VAL PRO ALA ILE SER ILE SEQRES 9 D 392 ALA ILE GLN ALA PHE THR LYS GLU GLY GLU ALA VAL LEU SEQRES 10 D 392 ILE ASN SER PRO VAL TYR PRO PRO PHE ALA ARG SER VAL SEQRES 11 D 392 ARG LEU ASN ASN ARG LYS LEU VAL SER ASN SER LEU LYS SEQRES 12 D 392 GLU GLU ASN GLY LEU PHE GLN ILE ASP PHE GLU GLN LEU SEQRES 13 D 392 GLU ASN ASP ILE VAL GLU ASN ASP VAL LYS LEU TYR LEU SEQRES 14 D 392 LEU CYS ASN PRO HIS ASN PRO GLY GLY ARG VAL TRP GLU SEQRES 15 D 392 ARG GLU VAL LEU GLU GLN ILE GLY HIS LEU CYS GLN LYS SEQRES 16 D 392 HIS HIS VAL ILE LEU VAL SER ASP GLU ILE HIS GLN ASP SEQRES 17 D 392 LEU THR LEU PHE GLY HIS GLU HIS VAL SER PHE ASN THR SEQRES 18 D 392 VAL SER PRO ASP PHE LYS ASP PHE ALA LEU VAL LEU SER SEQRES 19 D 392 SER ALA THR LYS THR PHE ASN ILE ALA GLY THR LYS ASN SEQRES 20 D 392 SER TYR ALA ILE ILE GLU ASN PRO THR LEU CYS ALA GLN SEQRES 21 D 392 PHE LYS HIS GLN GLN LEU VAL ASN ASN HIS HIS GLU VAL SEQRES 22 D 392 SER SER LEU GLY TYR ILE ALA THR GLU THR ALA TYR ARG SEQRES 23 D 392 TYR GLY LYS PRO TRP LEU VAL ALA LEU LYS ALA VAL LEU SEQRES 24 D 392 GLU GLU ASN ILE GLN PHE ALA VAL GLU TYR PHE ALA GLN SEQRES 25 D 392 GLU ALA PRO ARG LEU LYS VAL MET LYS PRO GLN GLY THR SEQRES 26 D 392 TYR LEU ILE TRP LEU ASP PHE SER ASP TYR GLY LEU THR SEQRES 27 D 392 ASP ASP ALA LEU PHE THR LEU LEU HIS ASP GLN ALA LYS SEQRES 28 D 392 VAL ILE LEU ASN ARG GLY SER ASP TYR GLY SER GLU GLY SEQRES 29 D 392 GLU LEU HIS ALA ARG LEU ASN ILE ALA ALA PRO LYS SER SEQRES 30 D 392 LEU VAL GLU GLU ILE CYS LYS ARG ILE VAL CYS CYS LEU SEQRES 31 D 392 PRO LYS HET PLP A 401 15 HET PLS A 501 22 HET EPE A 601 15 HET EPE A 602 15 HET EPE A 603 15 HET NA A 701 1 HET PLS B 501 22 HET EPE B 601 15 HET EPE B 602 15 HET NA B 701 1 HET PLP C 401 15 HET PLS C 501 22 HET EPE C 601 15 HET EPE C 602 15 HET EPE C 603 15 HET NA C 701 1 HET PLS D 501 22 HET EPE D 601 15 HET EPE D 602 15 HET EPE D 603 15 HET NA D 701 1 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM PLS [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4- HETNAM 2 PLS YLMETHYL]-SERINE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM NA SODIUM ION HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN PLS PYRIDOXYL-SERINE-5-MONOPHOSPHATE HETSYN EPE HEPES FORMUL 5 PLP 2(C8 H10 N O6 P) FORMUL 6 PLS 4(C11 H17 N2 O8 P) FORMUL 7 EPE 11(C8 H18 N2 O4 S) FORMUL 10 NA 4(NA 1+) FORMUL 26 HOH *1616(H2 O) HELIX 1 1 TRP A 20 ASP A 26 1 7 HELIX 2 2 MET A 42 GLU A 54 1 13 HELIX 3 3 SER A 64 GLN A 80 1 17 HELIX 4 4 ASP A 84 GLU A 86 5 3 HELIX 5 5 GLY A 93 THR A 106 1 14 HELIX 6 6 TYR A 119 ASN A 129 1 11 HELIX 7 7 ASP A 148 ASP A 160 1 13 HELIX 8 8 GLU A 178 HIS A 193 1 16 HELIX 9 9 SER A 214 VAL A 218 5 5 HELIX 10 10 ASP A 221 ASP A 224 5 4 HELIX 11 11 ALA A 232 ASN A 237 1 6 HELIX 12 12 ILE A 238 LYS A 242 5 5 HELIX 13 13 ASN A 250 ASN A 264 1 15 HELIX 14 14 SER A 270 GLY A 284 1 15 HELIX 15 15 GLY A 284 ALA A 310 1 27 HELIX 16 16 THR A 334 GLN A 345 1 12 HELIX 17 17 SER A 354 GLU A 361 5 8 HELIX 18 18 PRO A 371 CYS A 385 1 15 HELIX 19 19 TRP B 20 ASP B 26 1 7 HELIX 20 20 MET B 42 GLU B 54 1 13 HELIX 21 21 SER B 64 GLN B 80 1 17 HELIX 22 22 ASP B 84 GLU B 86 5 3 HELIX 23 23 GLY B 93 THR B 106 1 14 HELIX 24 24 TYR B 119 ASN B 129 1 11 HELIX 25 25 ASP B 148 ASP B 160 1 13 HELIX 26 26 GLU B 178 HIS B 193 1 16 HELIX 27 27 SER B 214 VAL B 218 5 5 HELIX 28 28 ASP B 221 ASP B 224 5 4 HELIX 29 29 ALA B 232 ASN B 237 1 6 HELIX 30 30 ILE B 238 LYS B 242 5 5 HELIX 31 31 ASN B 250 ASN B 264 1 15 HELIX 32 32 SER B 270 GLY B 284 1 15 HELIX 33 33 GLY B 284 ALA B 310 1 27 HELIX 34 34 THR B 334 GLN B 345 1 12 HELIX 35 35 SER B 354 GLU B 361 5 8 HELIX 36 36 PRO B 371 CYS B 385 1 15 HELIX 37 37 LYS C 21 THR C 25 5 5 HELIX 38 38 MET C 42 GLU C 54 1 13 HELIX 39 39 SER C 64 GLN C 80 1 17 HELIX 40 40 ASP C 84 GLU C 86 5 3 HELIX 41 41 GLY C 93 THR C 106 1 14 HELIX 42 42 TYR C 119 ASN C 129 1 11 HELIX 43 43 ASP C 148 ASP C 160 1 13 HELIX 44 44 GLU C 178 HIS C 193 1 16 HELIX 45 45 SER C 214 VAL C 218 5 5 HELIX 46 46 ASP C 221 ASP C 224 5 4 HELIX 47 47 ALA C 232 ASN C 237 1 6 HELIX 48 48 ILE C 238 LYS C 242 5 5 HELIX 49 49 ASN C 250 ASN C 264 1 15 HELIX 50 50 SER C 270 GLY C 284 1 15 HELIX 51 51 GLY C 284 ALA C 310 1 27 HELIX 52 52 THR C 334 GLN C 345 1 12 HELIX 53 53 SER C 354 GLU C 361 5 8 HELIX 54 54 PRO C 371 CYS C 385 1 15 HELIX 55 55 TRP D 20 ASP D 26 1 7 HELIX 56 56 MET D 42 GLU D 54 1 13 HELIX 57 57 SER D 64 GLN D 80 1 17 HELIX 58 58 ASP D 84 GLU D 86 5 3 HELIX 59 59 GLY D 93 THR D 106 1 14 HELIX 60 60 TYR D 119 ASN D 129 1 11 HELIX 61 61 ASP D 148 ASP D 160 1 13 HELIX 62 62 GLU D 178 HIS D 193 1 16 HELIX 63 63 SER D 214 VAL D 218 5 5 HELIX 64 64 ASP D 221 ASP D 224 5 4 HELIX 65 65 ALA D 232 ASN D 237 1 6 HELIX 66 66 ILE D 238 LYS D 242 5 5 HELIX 67 67 ASN D 250 ASN D 264 1 15 HELIX 68 68 SER D 270 GLY D 284 1 15 HELIX 69 69 GLY D 284 ALA D 310 1 27 HELIX 70 70 THR D 334 GLN D 345 1 12 HELIX 71 71 SER D 354 GLU D 361 5 8 HELIX 72 72 PRO D 371 CYS D 385 1 15 SHEET 1 A 2 LEU A 30 PRO A 31 0 SHEET 2 A 2 VAL A 348 ILE A 349 1 O ILE A 349 N LEU A 30 SHEET 1 B 7 ILE A 88 VAL A 91 0 SHEET 2 B 7 SER A 244 ILE A 247 -1 O ALA A 246 N VAL A 89 SHEET 3 B 7 ALA A 226 SER A 230 -1 N VAL A 228 O ILE A 247 SHEET 4 B 7 ILE A 195 ASP A 199 1 N SER A 198 O LEU A 229 SHEET 5 B 7 VAL A 161 CYS A 167 1 N LEU A 166 O ASP A 199 SHEET 6 B 7 ALA A 111 SER A 116 1 N LEU A 113 O LEU A 163 SHEET 7 B 7 LYS A 132 SER A 137 1 O ASN A 136 N ILE A 114 SHEET 1 C 2 LYS A 139 GLU A 141 0 SHEET 2 C 2 LEU A 144 GLN A 146 -1 O GLN A 146 N LYS A 139 SHEET 1 D 4 LYS A 314 MET A 316 0 SHEET 2 D 4 LEU A 323 ASP A 327 -1 O ASP A 327 N LYS A 314 SHEET 3 D 4 HIS A 363 ASN A 367 -1 O LEU A 366 N ILE A 324 SHEET 4 D 4 ASN A 351 ARG A 352 -1 N ASN A 351 O ARG A 365 SHEET 1 E 2 LEU B 30 PRO B 31 0 SHEET 2 E 2 VAL B 348 ILE B 349 1 O ILE B 349 N LEU B 30 SHEET 1 F 7 ILE B 88 VAL B 91 0 SHEET 2 F 7 SER B 244 ILE B 247 -1 O ALA B 246 N VAL B 89 SHEET 3 F 7 ALA B 226 SER B 230 -1 N VAL B 228 O ILE B 247 SHEET 4 F 7 ILE B 195 ASP B 199 1 N SER B 198 O LEU B 229 SHEET 5 F 7 VAL B 161 CYS B 167 1 N LEU B 166 O ASP B 199 SHEET 6 F 7 ALA B 111 SER B 116 1 N LEU B 113 O LEU B 165 SHEET 7 F 7 LYS B 132 SER B 137 1 O ASN B 136 N ILE B 114 SHEET 1 G 2 LYS B 139 GLU B 141 0 SHEET 2 G 2 LEU B 144 GLN B 146 -1 O GLN B 146 N LYS B 139 SHEET 1 H 4 LYS B 314 MET B 316 0 SHEET 2 H 4 LEU B 323 ASP B 327 -1 O ASP B 327 N LYS B 314 SHEET 3 H 4 HIS B 363 ASN B 367 -1 O LEU B 366 N ILE B 324 SHEET 4 H 4 ASN B 351 ARG B 352 -1 N ASN B 351 O ARG B 365 SHEET 1 I 2 LEU C 30 PRO C 31 0 SHEET 2 I 2 VAL C 348 ILE C 349 1 O ILE C 349 N LEU C 30 SHEET 1 J 7 ILE C 88 VAL C 91 0 SHEET 2 J 7 SER C 244 ILE C 247 -1 O ALA C 246 N VAL C 89 SHEET 3 J 7 ALA C 226 SER C 230 -1 N VAL C 228 O ILE C 247 SHEET 4 J 7 ILE C 195 ASP C 199 1 N SER C 198 O LEU C 229 SHEET 5 J 7 VAL C 161 CYS C 167 1 N LEU C 166 O ASP C 199 SHEET 6 J 7 ALA C 111 SER C 116 1 N LEU C 113 O LEU C 165 SHEET 7 J 7 LYS C 132 SER C 137 1 O ASN C 136 N ILE C 114 SHEET 1 K 2 LYS C 139 GLU C 141 0 SHEET 2 K 2 LEU C 144 GLN C 146 -1 O GLN C 146 N LYS C 139 SHEET 1 L 4 LYS C 314 MET C 316 0 SHEET 2 L 4 LEU C 323 ASP C 327 -1 O ASP C 327 N LYS C 314 SHEET 3 L 4 HIS C 363 ASN C 367 -1 O ALA C 364 N LEU C 326 SHEET 4 L 4 ASN C 351 ARG C 352 -1 N ASN C 351 O ARG C 365 SHEET 1 M 2 LEU D 30 PRO D 31 0 SHEET 2 M 2 VAL D 348 ILE D 349 1 O ILE D 349 N LEU D 30 SHEET 1 N 7 ILE D 88 VAL D 91 0 SHEET 2 N 7 SER D 244 ILE D 247 -1 O ALA D 246 N VAL D 89 SHEET 3 N 7 ALA D 226 SER D 230 -1 N VAL D 228 O ILE D 247 SHEET 4 N 7 ILE D 195 ASP D 199 1 N SER D 198 O LEU D 229 SHEET 5 N 7 VAL D 161 CYS D 167 1 N LEU D 166 O ASP D 199 SHEET 6 N 7 ALA D 111 SER D 116 1 N LEU D 113 O LEU D 165 SHEET 7 N 7 LYS D 132 SER D 137 1 O ASN D 136 N ILE D 114 SHEET 1 O 2 LYS D 139 GLU D 141 0 SHEET 2 O 2 LEU D 144 GLN D 146 -1 O GLN D 146 N LYS D 139 SHEET 1 P 4 LYS D 314 MET D 316 0 SHEET 2 P 4 LEU D 323 ASP D 327 -1 O ASP D 327 N LYS D 314 SHEET 3 P 4 HIS D 363 ASN D 367 -1 O ALA D 364 N LEU D 326 SHEET 4 P 4 ASN D 351 ARG D 352 -1 N ASN D 351 O ARG D 365 SSBOND 1 CYS A 384 CYS A 385 1555 1555 2.06 SSBOND 2 CYS B 384 CYS B 385 1555 1555 2.04 LINK OG SER B 358 NA NA B 701 1555 1555 2.52 LINK OG SER A 358 NA NA A 701 1555 1555 2.53 LINK OG SER D 358 NA NA D 701 1555 1555 2.54 LINK OG SER C 358 NA NA C 701 1555 1555 2.66 LINK C4ACPLP A 401 NZ ALYS A 234 1555 1555 1.34 LINK C4ACPLP C 401 NZ ALYS C 234 1555 1555 1.33 LINK NA NA C 701 O HOH C1058 1555 1555 2.30 LINK NA NA A 701 O HOH A1025 1555 1555 2.30 LINK NA NA D 701 O HOH D 966 1555 1555 2.35 LINK NA NA A 701 O HOH A 895 1555 1555 2.37 LINK NA NA D 701 O HOH D 964 1555 1555 2.38 LINK NA NA B 701 O HOH B1185 1555 1555 2.38 LINK NA NA A 701 O HOH A1157 1555 1555 2.38 LINK NA NA B 701 O HOH B 970 1555 1555 2.38 LINK NA NA B 701 O HOH B1059 1555 1555 2.40 LINK NA NA D 701 O HOH D 827 1555 1555 2.41 LINK NA NA C 701 O HOH C 923 1555 1555 2.42 LINK NA NA B 701 O HOH B 939 1555 1555 2.44 LINK NA NA D 701 O HOH D1017 1555 1555 2.46 LINK NA NA A 701 O HOH A 970 1555 1555 2.48 LINK NA NA A 701 O HOH A1037 1555 1555 2.51 LINK NA NA C 701 O HOH C 949 1555 1555 2.54 LINK NA NA C 701 O HOH C1114 1555 1555 2.55 LINK NA NA D 701 O HOH D 939 1555 1555 2.64 LINK NA NA B 701 O HOH B1070 1555 1555 2.74 CISPEP 1 SER A 116 PRO A 117 0 1.64 CISPEP 2 ASN A 168 PRO A 169 0 0.99 CISPEP 3 ASN A 168 PRO A 169 0 -1.85 CISPEP 4 ASN A 171 PRO A 172 0 6.91 CISPEP 5 SER B 116 PRO B 117 0 2.10 CISPEP 6 ASN B 168 PRO B 169 0 1.10 CISPEP 7 ASN B 168 PRO B 169 0 -1.76 CISPEP 8 ASN B 171 PRO B 172 0 7.04 CISPEP 9 SER C 116 PRO C 117 0 0.46 CISPEP 10 ASN C 168 PRO C 169 0 -1.93 CISPEP 11 ASN C 168 PRO C 169 0 0.54 CISPEP 12 ASN C 171 PRO C 172 0 8.79 CISPEP 13 SER D 116 PRO D 117 0 -1.79 CISPEP 14 ASN D 168 PRO D 169 0 -1.07 CISPEP 15 ASN D 168 PRO D 169 0 1.72 CISPEP 16 ASN D 171 PRO D 172 0 7.78 SITE 1 AC1 14 VAL A 94 VAL A 95 PRO A 96 TYR A 119 SITE 2 AC1 14 CYS A 167 ASN A 171 ASP A 199 ILE A 201 SITE 3 AC1 14 HIS A 202 HOH A 852 HOH A 960 HOH A1064 SITE 4 AC1 14 TYR B 60 EPE B 601 SITE 1 AC2 18 ILE A 34 ALA A 35 GLY A 93 VAL A 94 SITE 2 AC2 18 VAL A 95 TYR A 119 CYS A 167 ASN A 171 SITE 3 AC2 18 ASP A 199 ILE A 201 HIS A 202 ARG A 365 SITE 4 AC2 18 HOH A 852 HOH A 927 HOH A 960 HOH A1064 SITE 5 AC2 18 TYR B 60 EPE B 601 SITE 1 AC3 10 TYR A 60 GLU A 268 HOH A1041 TYR B 18 SITE 2 AC3 10 TRP B 33 TYR B 119 PLS B 501 HOH B1184 SITE 3 AC3 10 HOH B1201 EPE C 602 SITE 1 AC4 8 PRO A 120 PRO A 121 ASP A 355 HOH A1035 SITE 2 AC4 8 HOH A1079 EPE B 601 ASP D 336 ARG D 352 SITE 1 AC5 6 ASP A 84 LYS A 85 GLU A 86 HOH A 940 SITE 2 AC5 6 HOH A1200 GLN C 28 SITE 1 AC6 6 SER A 358 HOH A 895 HOH A 970 HOH A1025 SITE 2 AC6 6 HOH A1037 HOH A1157 SITE 1 AC7 21 TYR A 60 EPE A 601 ILE B 34 ALA B 35 SITE 2 AC7 21 GLY B 93 VAL B 94 VAL B 95 PRO B 96 SITE 3 AC7 21 TYR B 119 CYS B 167 ASN B 171 ASP B 199 SITE 4 AC7 21 ILE B 201 HIS B 202 LYS B 234 ARG B 365 SITE 5 AC7 21 HOH B 848 HOH B 903 HOH B 961 HOH B1184 SITE 6 AC7 21 HOH B1201 SITE 1 AC8 12 TYR A 18 TRP A 33 VAL A 95 TYR A 119 SITE 2 AC8 12 PLP A 401 PLS A 501 EPE A 602 HOH A1064 SITE 3 AC8 12 HOH A1177 TYR B 60 GLU B 268 HOH B 953 SITE 1 AC9 4 ASP B 84 LYS B 85 GLU B 86 HOH B 925 SITE 1 BC1 6 SER B 358 HOH B 939 HOH B 970 HOH B1059 SITE 2 BC1 6 HOH B1070 HOH B1185 SITE 1 BC2 14 VAL C 94 VAL C 95 PRO C 96 TYR C 119 SITE 2 BC2 14 CYS C 167 ASN C 171 ASP C 199 ILE C 201 SITE 3 BC2 14 HIS C 202 HOH C 852 HOH C 900 HOH C1139 SITE 4 BC2 14 HOH C1171 TYR D 60 SITE 1 BC3 20 ILE C 34 ALA C 35 GLY C 93 VAL C 94 SITE 2 BC3 20 VAL C 95 TYR C 119 CYS C 167 ASN C 171 SITE 3 BC3 20 ASP C 199 ILE C 201 HIS C 202 ARG C 365 SITE 4 BC3 20 HOH C 852 HOH C 900 HOH C 911 HOH C 933 SITE 5 BC3 20 HOH C1139 HOH C1171 TYR D 60 EPE D 601 SITE 1 BC4 11 TYR C 60 GLU C 268 HOH C 877 TYR D 18 SITE 2 BC4 11 TRP D 33 VAL D 95 TYR D 119 PLS D 501 SITE 3 BC4 11 EPE D 602 HOH D1037 HOH D1144 SITE 1 BC5 8 EPE A 601 PRO B 120 PRO B 121 HOH B 849 SITE 2 BC5 8 HOH B 927 HOH B1100 HOH B1201 HOH C1040 SITE 1 BC6 7 PRO C 120 PRO C 121 HOH C 911 HOH C1068 SITE 2 BC6 7 HOH C1097 HOH C1129 EPE D 601 SITE 1 BC7 5 SER C 358 HOH C 923 HOH C 949 HOH C1058 SITE 2 BC7 5 HOH C1114 SITE 1 BC8 20 TYR C 60 EPE C 601 ILE D 34 ALA D 35 SITE 2 BC8 20 GLY D 93 VAL D 94 VAL D 95 TYR D 119 SITE 3 BC8 20 CYS D 167 ASN D 171 ASP D 199 ILE D 201 SITE 4 BC8 20 HIS D 202 LYS D 234 ARG D 365 HOH D 828 SITE 5 BC8 20 HOH D 851 HOH D 907 HOH D1037 HOH D1144 SITE 1 BC9 12 TYR C 18 TRP C 33 VAL C 95 TYR C 119 SITE 2 BC9 12 PLS C 501 EPE C 603 HOH C1097 HOH C1129 SITE 3 BC9 12 HOH C1139 TYR D 60 GLU D 268 HOH D 927 SITE 1 CC1 12 ASP A 336 PHE A 339 EPE C 601 PRO D 120 SITE 2 CC1 12 PRO D 121 ASP D 355 HOH D 989 HOH D1039 SITE 3 CC1 12 HOH D1063 HOH D1067 HOH D1106 HOH D1144 SITE 1 CC2 4 ASP D 84 LYS D 85 GLU D 86 HOH D 965 SITE 1 CC3 6 SER D 358 HOH D 827 HOH D 939 HOH D 964 SITE 2 CC3 6 HOH D 966 HOH D1017 CRYST1 66.965 111.302 217.193 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014933 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004604 0.00000