PDB Short entry for 3BHG HEADER LYASE 28-NOV-07 3BHG TITLE CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE FROM LEGIONELLA TITLE 2 PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLOSUCCINATE LYASE; COMPND 3 CHAIN: A; COMPND 4 EC: 4.3.2.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA STR. SOURCE 3 PHILADELPHIA 1; SOURCE 4 ORGANISM_TAXID: 272624; SOURCE 5 STRAIN: PHILADELPHIA 1, DSM 7513; SOURCE 6 ATCC: 33152; SOURCE 7 GENE: LPG0801; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) DERIVATIVE; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ADENYLOSUCCINATE LYASE, LEGIONELLA PNEUMOPHILA, STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,H.LI,L.FREEMAN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 13-JUL-11 3BHG 1 VERSN REVDAT 3 24-FEB-09 3BHG 1 VERSN REVDAT 2 29-JUL-08 3BHG 1 JRNL KEYWDS TITLE REVDAT 1 04-DEC-07 3BHG 0 JRNL AUTH C.CHANG,H.LI,L.FREEMAN,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE FROM LEGIONELLA JRNL TITL 2 PNEUMOPHILA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 37130 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1861 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2486 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 128 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3497 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 273 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.65000 REMARK 3 B22 (A**2) : -1.65000 REMARK 3 B33 (A**2) : 3.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.141 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.416 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3618 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4918 ; 1.309 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 456 ; 5.494 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 165 ;35.629 ;24.909 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 614 ;14.416 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.697 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 562 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2724 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1716 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2555 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 214 ; 0.138 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 156 ; 0.151 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 44 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2306 ; 0.818 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3631 ; 1.097 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1473 ; 1.962 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1283 ; 2.988 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 22 REMARK 3 ORIGIN FOR THE GROUP (A): -17.4223 18.8124 5.8039 REMARK 3 T TENSOR REMARK 3 T11: -0.0149 T22: -0.0246 REMARK 3 T33: -0.0273 T12: 0.0965 REMARK 3 T13: 0.0610 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 4.8110 L22: 9.5139 REMARK 3 L33: 0.5108 L12: 4.3498 REMARK 3 L13: -0.5885 L23: -0.7360 REMARK 3 S TENSOR REMARK 3 S11: 0.1847 S12: -0.0810 S13: 0.3051 REMARK 3 S21: 0.4539 S22: 0.0168 S23: 0.3713 REMARK 3 S31: -0.5203 S32: -0.3783 S33: -0.2015 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0775 35.2906 -18.6316 REMARK 3 T TENSOR REMARK 3 T11: 0.1136 T22: -0.1538 REMARK 3 T33: -0.0254 T12: 0.1102 REMARK 3 T13: -0.0152 T23: 0.0678 REMARK 3 L TENSOR REMARK 3 L11: 1.9048 L22: 2.4283 REMARK 3 L33: 4.0196 L12: -0.0551 REMARK 3 L13: -1.5449 L23: -0.6461 REMARK 3 S TENSOR REMARK 3 S11: 0.1784 S12: 0.1892 S13: 0.3080 REMARK 3 S21: -0.1878 S22: -0.0979 S23: 0.0353 REMARK 3 S31: -0.7798 S32: -0.4038 S33: -0.0805 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 371 REMARK 3 ORIGIN FOR THE GROUP (A): 3.0148 16.8103 4.7497 REMARK 3 T TENSOR REMARK 3 T11: -0.0257 T22: -0.0951 REMARK 3 T33: 0.0098 T12: -0.0024 REMARK 3 T13: 0.0094 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.2857 L22: 0.3674 REMARK 3 L33: 0.8962 L12: 0.0228 REMARK 3 L13: 0.0075 L23: -0.0005 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: 0.0210 S13: 0.0743 REMARK 3 S21: 0.0800 S22: 0.0054 S23: 0.0086 REMARK 3 S31: -0.1806 S32: 0.0199 S33: -0.0161 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 372 A 380 REMARK 3 RESIDUE RANGE : A 445 A 456 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1500 12.4406 33.1994 REMARK 3 T TENSOR REMARK 3 T11: 0.0315 T22: -0.0071 REMARK 3 T33: -0.0032 T12: 0.0307 REMARK 3 T13: -0.0413 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 2.5196 L22: 1.5478 REMARK 3 L33: 5.7280 L12: 1.8596 REMARK 3 L13: -1.5753 L23: -0.2510 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: -0.3212 S13: 0.2736 REMARK 3 S21: 0.4112 S22: 0.2022 S23: -0.0843 REMARK 3 S31: -0.2125 S32: -0.1263 S33: -0.2187 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 381 A 444 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0722 -2.0499 40.9997 REMARK 3 T TENSOR REMARK 3 T11: 0.1717 T22: 0.0792 REMARK 3 T33: -0.1013 T12: 0.0777 REMARK 3 T13: -0.1318 T23: 0.0548 REMARK 3 L TENSOR REMARK 3 L11: 10.8471 L22: 1.1276 REMARK 3 L33: 5.9065 L12: -2.4464 REMARK 3 L13: -1.4885 L23: -0.1750 REMARK 3 S TENSOR REMARK 3 S11: -0.1645 S12: -0.7962 S13: -0.7501 REMARK 3 S21: 0.4721 S22: 0.0992 S23: -0.1346 REMARK 3 S31: 0.5613 S32: 0.6385 S33: 0.0653 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-07. REMARK 100 THE RCSB ID CODE IS RCSB045525. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37453 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 18.300 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 59.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 16.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 2.0 M AMMONIUM REMARK 280 SULFATE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 54.60800 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.54950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.27475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.60800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 117.82425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 117.82425 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.60800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.27475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 54.60800 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.54950 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 54.60800 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 78.54950 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 54.60800 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 117.82425 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 39.27475 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 54.60800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 39.27475 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 117.82425 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 54.60800 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 54.60800 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 78.54950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28290 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 741 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 751 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 760 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ILE A 289 REMARK 465 ALA A 290 REMARK 465 GLU A 291 REMARK 465 GLU A 292 REMARK 465 VAL A 293 REMARK 465 GLY A 294 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 3 CG CD1 CD2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 ASN A 90 CG OD1 REMARK 470 GLU A 108 CG CD OE1 OE2 REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 SER A 295 OG REMARK 470 SER A 296 OG REMARK 470 GLU A 403 CG CD OE1 OE2 REMARK 470 GLU A 407 CG CD OE1 OE2 REMARK 470 ARG A 410 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 412 CG CD OE1 NE2 REMARK 470 GLU A 417 CG CD OE1 OE2 REMARK 470 LYS A 420 CG CD CE NZ REMARK 470 LYS A 421 CG CD CE NZ REMARK 470 LYS A 424 CG CD CE NZ REMARK 470 ILE A 428 CG1 CG2 CD1 REMARK 470 GLU A 431 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 28 161.12 176.82 REMARK 500 ASN A 61 -58.18 -29.07 REMARK 500 ALA A 120 8.36 59.95 REMARK 500 THR A 176 126.84 -34.57 REMARK 500 PHE A 207 94.67 -160.55 REMARK 500 ASN A 208 16.57 -158.75 REMARK 500 THR A 246 -146.43 -92.04 REMARK 500 MSE A 333 -126.71 49.64 REMARK 500 ARG A 335 151.53 149.52 REMARK 500 ASN A 400 41.71 -102.87 REMARK 500 TYR A 444 58.17 -110.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS A 287 24.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC86988 RELATED DB: TARGETDB DBREF 3BHG A 1 456 UNP Q5ZXD1 Q5ZXD1_LEGPH 1 456 SEQADV 3BHG SER A -2 UNP Q5ZXD1 EXPRESSION TAG SEQADV 3BHG ASN A -1 UNP Q5ZXD1 EXPRESSION TAG SEQADV 3BHG ALA A 0 UNP Q5ZXD1 EXPRESSION TAG SEQRES 1 A 459 SER ASN ALA MSE THR LEU THR ALA LEU ASN ALA ILE SER SEQRES 2 A 459 PRO ILE ASP GLY ARG TYR VAL ASN LYS THR ARG ALA LEU SEQRES 3 A 459 SER PRO TYR PHE SER GLU PHE ALA LEU THR TYR TYR ARG SEQRES 4 A 459 LEU MSE VAL GLU ILE LYS TRP PHE GLU SER LEU ALA ALA SEQRES 5 A 459 ASN ASP THR ILE PRO GLU VAL PRO ALA LEU ASP ASN LYS SEQRES 6 A 459 ALA ARG LYS PHE LEU SER ASP LEU ILE SER ASN PHE ASN SEQRES 7 A 459 GLU SER GLU ALA GLU LYS ILE LYS GLU PHE GLU LYS GLN SEQRES 8 A 459 THR ASN HIS ASP VAL LYS ALA VAL GLU TYR TYR LEU GLN SEQRES 9 A 459 ASP LYS PHE GLN GLU ASN GLU GLN LEU LYS SER CYS VAL SEQRES 10 A 459 ALA PHE ILE HIS PHE ALA CYS THR SER GLU ASP ILE ASN SEQRES 11 A 459 ASN LEU ALA TYR ALA LEU MSE ILE LYS GLN ALA ILE ALA SEQRES 12 A 459 GLN VAL ILE GLN PRO THR ILE ALA GLU ILE MSE GLY SER SEQRES 13 A 459 ILE THR LEU LEU GLY LYS GLN HIS ALA ASP VAL ALA MSE SEQRES 14 A 459 LEU SER ARG THR HIS GLY GLN PRO ALA THR PRO THR THR SEQRES 15 A 459 MSE GLY LYS GLU LEU VAL ASN PHE VAL ALA ARG LEU LYS SEQRES 16 A 459 ARG PRO GLN GLN GLN LEU ALA GLU VAL LEU ILE PRO ALA SEQRES 17 A 459 LYS PHE ASN GLY ALA VAL GLY ASN TYR ASN ALA HIS VAL SEQRES 18 A 459 ALA ALA TYR PRO GLU VAL ASP TRP ARG LYS HIS CYS ALA SEQRES 19 A 459 ASN PHE VAL THR SER LEU GLY LEU SER PHE ASN ALA TYR SEQRES 20 A 459 THR THR GLN ILE GLU PRO HIS ASP GLY ILE ALA GLU VAL SEQRES 21 A 459 SER GLN ILE MSE VAL ARG ILE ASN ASN ILE LEU LEU ASP SEQRES 22 A 459 TYR THR GLN ASP ILE TRP SER TYR ILE SER LEU GLY TYR SEQRES 23 A 459 PHE LYS GLN LYS THR ILE ALA GLU GLU VAL GLY SER SER SEQRES 24 A 459 THR MSE PRO HIS LYS VAL ASN PRO ILE ASP PHE GLU ASN SEQRES 25 A 459 ALA GLU GLY ASN LEU GLY LEU SER ASN ALA LEU PHE ILE SEQRES 26 A 459 HIS PHE ALA ASN LYS LEU THR GLN SER ARG MSE GLN ARG SEQRES 27 A 459 ASP LEU SER ASP SER THR VAL LEU ARG ASN LEU GLY VAL SEQRES 28 A 459 ALA PHE SER TYR SER LEU ILE ALA TYR HIS SER VAL ALA SEQRES 29 A 459 LYS GLY ASN ASP LYS LEU GLN ILE ASN LYS SER ALA LEU SEQRES 30 A 459 GLN LYS ASP LEU SER GLU ASN TRP GLU VAL LEU ALA GLU SEQRES 31 A 459 ALA ILE GLN THR VAL MSE ARG ARG TYR ASN GLU PRO ASN SEQRES 32 A 459 ALA TYR GLU GLN LEU LYS GLU LEU THR ARG GLY GLN MSE SEQRES 33 A 459 ILE ASP ALA GLU ASN LEU LYS LYS PHE ILE LYS THR LEU SEQRES 34 A 459 SER ILE PRO GLU GLU ALA LYS ALA GLU LEU MSE LYS LEU SEQRES 35 A 459 THR PRO GLU THR TYR THR GLY LEU ALA THR GLN LEU VAL SEQRES 36 A 459 LYS ALA PHE SER MODRES 3BHG MSE A 38 MET SELENOMETHIONINE MODRES 3BHG MSE A 134 MET SELENOMETHIONINE MODRES 3BHG MSE A 151 MET SELENOMETHIONINE MODRES 3BHG MSE A 166 MET SELENOMETHIONINE MODRES 3BHG MSE A 180 MET SELENOMETHIONINE MODRES 3BHG MSE A 261 MET SELENOMETHIONINE MODRES 3BHG MSE A 298 MET SELENOMETHIONINE MODRES 3BHG MSE A 333 MET SELENOMETHIONINE MODRES 3BHG MSE A 393 MET SELENOMETHIONINE MODRES 3BHG MSE A 413 MET SELENOMETHIONINE MODRES 3BHG MSE A 437 MET SELENOMETHIONINE HET MSE A 38 8 HET MSE A 134 8 HET MSE A 151 8 HET MSE A 166 8 HET MSE A 180 8 HET MSE A 261 8 HET MSE A 298 8 HET MSE A 333 8 HET MSE A 393 8 HET MSE A 413 8 HET MSE A 437 8 HET SO4 A 501 5 HET SO4 A 502 5 HET GOL A 503 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *273(H2 O) HELIX 1 1 THR A 4 ALA A 8 5 5 HELIX 2 2 TYR A 16 ARG A 21 1 6 HELIX 3 3 ALA A 22 SER A 24 5 3 HELIX 4 4 SER A 28 ALA A 49 1 22 HELIX 5 5 ASP A 60 ASN A 73 1 14 HELIX 6 6 ASN A 75 GLU A 86 1 12 HELIX 7 7 HIS A 91 GLN A 105 1 15 HELIX 8 8 GLN A 109 ILE A 117 5 9 HELIX 9 9 THR A 122 VAL A 142 1 21 HELIX 10 10 VAL A 142 HIS A 161 1 20 HELIX 11 11 MSE A 180 VAL A 201 1 22 HELIX 12 12 TYR A 214 TYR A 221 1 8 HELIX 13 13 ASP A 225 LEU A 237 1 13 HELIX 14 14 HIS A 251 LEU A 281 1 31 HELIX 15 15 PRO A 304 LEU A 328 1 25 HELIX 16 16 SER A 338 ARG A 344 1 7 HELIX 17 17 ASN A 345 ASP A 365 1 21 HELIX 18 18 ASN A 370 GLU A 380 1 11 HELIX 19 19 ASN A 381 VAL A 384 5 4 HELIX 20 20 LEU A 385 TYR A 396 1 12 HELIX 21 21 ASN A 400 ARG A 410 1 11 HELIX 22 22 ASP A 415 THR A 425 1 11 HELIX 23 23 PRO A 429 LEU A 439 1 11 HELIX 24 24 THR A 440 TYR A 444 5 5 HELIX 25 25 LEU A 447 PHE A 455 1 9 SHEET 1 A 2 ALA A 165 THR A 170 0 SHEET 2 A 2 GLN A 173 THR A 179 -1 O THR A 178 N MSE A 166 SHEET 1 B 2 PRO A 204 ALA A 205 0 SHEET 2 B 2 SER A 240 PHE A 241 1 O SER A 240 N ALA A 205 SHEET 1 C 2 PHE A 284 GLN A 286 0 SHEET 2 C 2 LEU A 367 ILE A 369 -1 O GLN A 368 N LYS A 285 LINK C LEU A 37 N MSE A 38 1555 1555 1.33 LINK C MSE A 38 N VAL A 39 1555 1555 1.34 LINK C LEU A 133 N MSE A 134 1555 1555 1.34 LINK C MSE A 134 N ILE A 135 1555 1555 1.33 LINK C ILE A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N GLY A 152 1555 1555 1.34 LINK C ALA A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N LEU A 167 1555 1555 1.33 LINK C THR A 179 N MSE A 180 1555 1555 1.33 LINK C MSE A 180 N GLY A 181 1555 1555 1.33 LINK C ILE A 260 N MSE A 261 1555 1555 1.33 LINK C MSE A 261 N VAL A 262 1555 1555 1.33 LINK C THR A 297 N MSE A 298 1555 1555 1.33 LINK C MSE A 298 N PRO A 299 1555 1555 1.36 LINK C ARG A 332 N MSE A 333 1555 1555 1.34 LINK C MSE A 333 N GLN A 334 1555 1555 1.33 LINK C VAL A 392 N MSE A 393 1555 1555 1.33 LINK C MSE A 393 N ARG A 394 1555 1555 1.33 LINK C GLN A 412 N MSE A 413 1555 1555 1.33 LINK C MSE A 413 N ILE A 414 1555 1555 1.32 LINK C LEU A 436 N MSE A 437 1555 1555 1.33 LINK C MSE A 437 N LYS A 438 1555 1555 1.33 SITE 1 AC1 6 ARG A 36 HIS A 91 ASP A 92 VAL A 93 SITE 2 AC1 6 SER A 123 ASN A 127 SITE 1 AC2 4 HIS A 91 HIS A 171 HOH A 569 HOH A 610 SITE 1 AC3 9 ASN A 128 ILE A 203 PRO A 204 GLU A 249 SITE 2 AC3 9 HIS A 251 ILE A 254 HOH A 522 HOH A 547 SITE 3 AC3 9 HOH A 644 CRYST1 109.216 109.216 157.099 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009156 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009156 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006365 0.00000