PDB Short entry for 3BYR HEADER TRANSPORT PROTEIN 16-JAN-08 3BYR TITLE MODE OF ACTION OF A PUTATIVE ZINC TRANSPORTER CZRB (ZN FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CZRB PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 198-291; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: CZRB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PIVEX2.4D KEYWDS MEMBRANE PROTEIN, ZINC TRANSPORTER, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.CHEREZOV,V.SRINIVASAN,D.M.E.SZEBENYI,M.CAFFREY REVDAT 4 25-OCT-17 3BYR 1 SOURCE REMARK REVDAT 3 13-JUL-11 3BYR 1 VERSN REVDAT 2 24-FEB-09 3BYR 1 VERSN REVDAT 1 23-SEP-08 3BYR 0 JRNL AUTH V.CHEREZOV,N.HOFER,D.M.SZEBENYI,O.KOLAJ,J.G.WALL,R.GILLILAN, JRNL AUTH 2 V.SRINIVASAN,C.P.JARONIEC,M.CAFFREY JRNL TITL INSIGHTS INTO THE MODE OF ACTION OF A PUTATIVE ZINC JRNL TITL 2 TRANSPORTER CZRB IN THERMUS THERMOPHILUS JRNL REF STRUCTURE V. 16 1378 2008 JRNL REFN ISSN 0969-2126 JRNL PMID 18786400 JRNL DOI 10.1016/J.STR.2008.05.014 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0021 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 7397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 378 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 487 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 23 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 714 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 20.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.80000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.172 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.147 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 746 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1002 ; 1.109 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 88 ; 5.432 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;33.660 ;21.111 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 136 ;14.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;21.412 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 104 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 592 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 344 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 498 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 79 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.089 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.202 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.173 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.173 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 459 ; 0.400 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 710 ; 0.696 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 308 ; 1.296 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 292 ; 2.145 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 15 REMARK 3 ORIGIN FOR THE GROUP (A): 29.0950 24.9690 17.0108 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: 0.0167 REMARK 3 T33: -0.0188 T12: 0.0106 REMARK 3 T13: -0.0391 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.2527 L22: 1.5747 REMARK 3 L33: 2.1632 L12: 0.9035 REMARK 3 L13: -2.2055 L23: -1.5528 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.2062 S13: 0.1724 REMARK 3 S21: -0.1647 S22: -0.0312 S23: 0.0388 REMARK 3 S31: 0.0246 S32: 0.3387 S33: -0.0030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 27 REMARK 3 ORIGIN FOR THE GROUP (A): 12.2601 20.7015 19.7580 REMARK 3 T TENSOR REMARK 3 T11: 0.0403 T22: -0.0265 REMARK 3 T33: 0.0226 T12: -0.0248 REMARK 3 T13: -0.0361 T23: 0.0419 REMARK 3 L TENSOR REMARK 3 L11: 12.6000 L22: 2.2999 REMARK 3 L33: 0.9486 L12: 1.9796 REMARK 3 L13: 0.8272 L23: 1.4636 REMARK 3 S TENSOR REMARK 3 S11: 0.2395 S12: -0.0214 S13: -0.2885 REMARK 3 S21: 0.0557 S22: -0.0411 S23: 0.2220 REMARK 3 S31: 0.2516 S32: -0.0841 S33: -0.1984 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): 23.3691 30.5005 20.6952 REMARK 3 T TENSOR REMARK 3 T11: 0.0664 T22: 0.0052 REMARK 3 T33: 0.0295 T12: -0.0017 REMARK 3 T13: -0.0188 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 5.9037 L22: 1.9185 REMARK 3 L33: 4.2127 L12: 0.0287 REMARK 3 L13: 2.7934 L23: -0.1768 REMARK 3 S TENSOR REMARK 3 S11: -0.0426 S12: 0.1660 S13: 0.1638 REMARK 3 S21: 0.0372 S22: 0.0111 S23: -0.0613 REMARK 3 S31: -0.0764 S32: 0.3148 S33: 0.0315 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 46 A 81 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7667 29.3408 25.4501 REMARK 3 T TENSOR REMARK 3 T11: 0.0054 T22: 0.0103 REMARK 3 T33: 0.0396 T12: -0.0173 REMARK 3 T13: -0.0202 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 2.2857 L22: 2.3340 REMARK 3 L33: 0.6851 L12: -0.8070 REMARK 3 L13: 0.2193 L23: -0.8547 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: -0.0459 S13: 0.0217 REMARK 3 S21: 0.0466 S22: 0.1202 S23: 0.3066 REMARK 3 S31: 0.0617 S32: -0.1364 S33: -0.1439 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4391 32.8380 11.0109 REMARK 3 T TENSOR REMARK 3 T11: -0.0056 T22: 0.0021 REMARK 3 T33: 0.0439 T12: -0.0249 REMARK 3 T13: -0.0670 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 2.5165 L22: 2.9760 REMARK 3 L33: 2.8899 L12: -1.0220 REMARK 3 L13: 0.0147 L23: 0.8126 REMARK 3 S TENSOR REMARK 3 S11: -0.1047 S12: 0.4300 S13: -0.0730 REMARK 3 S21: -0.4455 S22: -0.0394 S23: 0.3469 REMARK 3 S31: -0.0051 S32: 0.0763 S33: 0.1441 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 5 TLS GROUPS USED REMARK 4 REMARK 4 3BYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000046124. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2827, 1.2818, 1.2567 REMARK 200 MONOCHROMATOR : SI(111), DOUBLE-FOCUSED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DPS, MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7849 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.38900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28 MG/ML PROTEIN, 25 MM ZINC CHLORIDE, REMARK 280 0.1 M TRIS-HCL, PH 7.50, BATCH, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.97000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 21.97000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.37500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.28000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.37500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.28000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.97000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.37500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.28000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 21.97000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.37500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.28000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -213.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 74.56000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 43.94000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 504 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 LEU A 2 REMARK 465 THR A 92 REMARK 465 ASN A 93 REMARK 465 PRO A 94 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 3 N CB CG SD CE REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 10 NH2 ARG A 14 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 4 -104.54 49.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 31 NE2 REMARK 620 2 HIS A 47 ND1 105.8 REMARK 620 3 GLU A 84 OE2 96.5 98.8 REMARK 620 4 HOH A 517 O 115.0 120.4 116.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 32 OD2 REMARK 620 2 HIS A 47 NE2 111.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 82 NE2 REMARK 620 2 GLU A 84 OE1 95.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BYP RELATED DB: PDB REMARK 900 APO-CZRB DBREF 3BYR A 1 94 UNP Q8VLX7 Q8VLX7_THETH 198 291 SEQRES 1 A 94 GLY LEU MET ASP GLU GLY LEU PRO PRO GLU GLU VAL GLU SEQRES 2 A 94 ARG ILE ARG ALA PHE LEU GLN GLU ARG ILE ARG GLY ARG SEQRES 3 A 94 ALA LEU GLU VAL HIS ASP LEU LYS THR ARG ARG ALA GLY SEQRES 4 A 94 PRO ARG SER PHE LEU GLU PHE HIS LEU VAL VAL ARG GLY SEQRES 5 A 94 ASP THR PRO VAL GLU GLU ALA HIS ARG LEU CYS ASP GLU SEQRES 6 A 94 LEU GLU ARG ALA LEU ALA GLN ALA PHE PRO GLY LEU GLN SEQRES 7 A 94 ALA THR ILE HIS VAL GLU PRO GLU GLY GLU ARG LYS ARG SEQRES 8 A 94 THR ASN PRO HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET ZN A 504 1 HETNAM ZN ZINC ION FORMUL 2 ZN 4(ZN 2+) FORMUL 6 HOH *97(H2 O) HELIX 1 1 PRO A 8 ILE A 23 1 16 HELIX 2 2 PRO A 55 PHE A 74 1 20 HELIX 3 3 PRO A 85 ARG A 89 5 5 SHEET 1 A 3 GLU A 29 ALA A 38 0 SHEET 2 A 3 ARG A 41 VAL A 49 -1 O PHE A 43 N ARG A 36 SHEET 3 A 3 LEU A 77 GLU A 84 1 O HIS A 82 N PHE A 46 LINK NE2 HIS A 31 ZN ZN A 501 1555 1555 2.08 LINK OD2 ASP A 32 ZN ZN A 503 1555 1555 1.98 LINK ND1 HIS A 47 ZN ZN A 501 1555 1555 2.02 LINK NE2 HIS A 47 ZN ZN A 503 1555 1555 2.37 LINK NE2 HIS A 82 ZN ZN A 502 1555 1555 2.13 LINK OE1 GLU A 84 ZN ZN A 502 1555 1555 2.27 LINK OE2 GLU A 84 ZN ZN A 501 1555 1555 1.94 LINK ZN ZN A 501 O HOH A 517 1555 1555 1.96 LINK ZN ZN A 504 O HOH A 528 1555 1555 1.86 SITE 1 AC1 5 ASP A 4 HIS A 31 HIS A 47 GLU A 84 SITE 2 AC1 5 HOH A 517 SITE 1 AC2 6 HIS A 60 HIS A 82 GLU A 84 HOH A 527 SITE 2 AC2 6 HOH A 585 HOH A 589 SITE 1 AC3 3 ASP A 32 HIS A 47 HOH A 516 SITE 1 AC4 3 GLU A 57 HOH A 528 HOH A 586 CRYST1 50.750 74.560 43.940 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019704 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013412 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022758 0.00000