PDB Short entry for 3CAN HEADER LYASE ACTIVATOR 20-FEB-08 3CAN TITLE CRYSTAL STRUCTURE OF A DOMAIN OF PYRUVATE-FORMATE LYASE-ACTIVATING TITLE 2 ENZYME FROM BACTEROIDES VULGATUS ATCC 8482 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE-FORMATE LYASE-ACTIVATING ENZYME; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAIN: RESIDUES 124-302; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS ATCC 8482; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: DSM 1447 / NCTC 11154; SOURCE 5 GENE: BVU_1420; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PYRUVATE-FORMATE LYASE-ACTIVATING ENZYME, PSI, KEYWDS 2 MCSG, APC20359.1, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, IRON, IRON-SULFUR, METAL-BINDING, LYASE KEYWDS 4 ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,R.HENDRICKS,C.HATZOS,R.JEDRZEJCZAK,A.JOACHIMIAK,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 3CAN 1 VERSN REVDAT 2 24-FEB-09 3CAN 1 VERSN REVDAT 1 04-MAR-08 3CAN 0 JRNL AUTH B.NOCEK,R.HENDRICKS,C.HATZOS,R.JEDRZEJCZAK,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF A DOMAIN OF PYRUVATE-FORMATE JRNL TITL 2 LYASE-ACTIVATING ENZYME FROM BACTEROIDES VULGATUS ATCC 8482. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 26580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1343 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1835 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.1770 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.1940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1267 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -0.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.082 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.870 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1329 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 915 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1807 ; 1.144 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2256 ; 0.842 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 171 ; 5.088 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 61 ;33.390 ;24.754 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 248 ;12.153 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;15.011 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 211 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1465 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 244 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 259 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1003 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 655 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 697 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 102 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.190 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 29 ; 0.280 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.255 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1033 ; 0.851 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 330 ; 0.151 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1344 ; 1.079 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 546 ; 1.821 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 458 ; 2.714 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): 14.3115 -11.9710 28.1087 REMARK 3 T TENSOR REMARK 3 T11: 0.0660 T22: 0.0647 REMARK 3 T33: 0.0780 T12: -0.0090 REMARK 3 T13: 0.0109 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.7156 L22: 1.0011 REMARK 3 L33: 15.7136 L12: -0.1581 REMARK 3 L13: -2.8145 L23: -1.4966 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: 0.0656 S13: 0.0686 REMARK 3 S21: 0.0597 S22: 0.1086 S23: 0.0601 REMARK 3 S31: -0.0749 S32: -0.2963 S33: -0.1389 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 37 REMARK 3 ORIGIN FOR THE GROUP (A): 22.8086 -15.9581 27.5402 REMARK 3 T TENSOR REMARK 3 T11: 0.0798 T22: 0.0645 REMARK 3 T33: 0.0826 T12: 0.0189 REMARK 3 T13: -0.0089 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.3827 L22: 0.6250 REMARK 3 L33: 2.4381 L12: 0.0880 REMARK 3 L13: -0.2467 L23: -0.3727 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.0881 S13: -0.0706 REMARK 3 S21: 0.1204 S22: -0.0200 S23: -0.1753 REMARK 3 S31: -0.1003 S32: -0.0078 S33: 0.0101 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 55 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0151 -7.1391 34.6285 REMARK 3 T TENSOR REMARK 3 T11: 0.1058 T22: 0.0548 REMARK 3 T33: 0.0872 T12: -0.0024 REMARK 3 T13: -0.0396 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.9181 L22: 2.7436 REMARK 3 L33: 0.7268 L12: -0.6371 REMARK 3 L13: -0.6006 L23: 0.7241 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.0665 S13: -0.0432 REMARK 3 S21: 0.3000 S22: 0.0442 S23: -0.2711 REMARK 3 S31: -0.0033 S32: 0.0389 S33: 0.0236 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 56 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0684 -1.4361 32.5794 REMARK 3 T TENSOR REMARK 3 T11: 0.1190 T22: 0.0398 REMARK 3 T33: 0.0539 T12: 0.0064 REMARK 3 T13: 0.0178 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.6312 L22: 2.9185 REMARK 3 L33: 3.9609 L12: -2.2203 REMARK 3 L13: -2.9126 L23: 3.3352 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: -0.0010 S13: -0.0960 REMARK 3 S21: 0.0736 S22: -0.0961 S23: -0.0035 REMARK 3 S31: -0.0754 S32: 0.0122 S33: 0.0604 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8828 0.9808 47.6644 REMARK 3 T TENSOR REMARK 3 T11: 0.1933 T22: 0.0284 REMARK 3 T33: 0.0136 T12: -0.0452 REMARK 3 T13: 0.0428 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 2.7340 L22: 10.4517 REMARK 3 L33: 15.3851 L12: -1.1209 REMARK 3 L13: -2.5718 L23: 1.2615 REMARK 3 S TENSOR REMARK 3 S11: -0.1136 S12: -0.3075 S13: -0.0100 REMARK 3 S21: 0.3146 S22: -0.0712 S23: -0.0066 REMARK 3 S31: 1.1113 S32: 0.2344 S33: 0.1848 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 80 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0250 -3.0200 46.2962 REMARK 3 T TENSOR REMARK 3 T11: 0.4094 T22: -0.0412 REMARK 3 T33: -0.0838 T12: -0.0476 REMARK 3 T13: -0.0234 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 38.7324 L22: 19.8678 REMARK 3 L33: 65.6768 L12: 13.6894 REMARK 3 L13: -42.8491 L23: 1.4279 REMARK 3 S TENSOR REMARK 3 S11: -0.2671 S12: 2.5984 S13: -0.0446 REMARK 3 S21: -0.9755 S22: -0.2514 S23: 0.2905 REMARK 3 S31: 2.9454 S32: -2.8818 S33: 0.5185 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 81 A 86 REMARK 3 ORIGIN FOR THE GROUP (A): 18.2551 1.9679 42.8633 REMARK 3 T TENSOR REMARK 3 T11: 0.1350 T22: -0.0064 REMARK 3 T33: 0.0115 T12: 0.0184 REMARK 3 T13: 0.0312 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 21.4084 L22: 7.4187 REMARK 3 L33: 24.8455 L12: 6.2392 REMARK 3 L13: -8.8547 L23: -10.2079 REMARK 3 S TENSOR REMARK 3 S11: -0.3539 S12: -0.5684 S13: -0.2115 REMARK 3 S21: -0.0553 S22: -0.3568 S23: -0.3964 REMARK 3 S31: 0.8589 S32: 0.4348 S33: 0.7107 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 87 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6346 3.0224 32.3421 REMARK 3 T TENSOR REMARK 3 T11: 0.0859 T22: 0.0234 REMARK 3 T33: 0.0869 T12: -0.0193 REMARK 3 T13: 0.0073 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 5.6560 L22: 4.4570 REMARK 3 L33: 3.6808 L12: -1.9296 REMARK 3 L13: -1.4603 L23: 4.0408 REMARK 3 S TENSOR REMARK 3 S11: -0.1631 S12: -0.1848 S13: 0.0444 REMARK 3 S21: 0.1541 S22: 0.1869 S23: -0.2806 REMARK 3 S31: 0.0614 S32: 0.3617 S33: -0.0238 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 98 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1682 3.0845 33.2733 REMARK 3 T TENSOR REMARK 3 T11: 0.0741 T22: 0.0914 REMARK 3 T33: 0.0640 T12: -0.0067 REMARK 3 T13: -0.0123 T23: -0.0616 REMARK 3 L TENSOR REMARK 3 L11: 6.9868 L22: 1.9413 REMARK 3 L33: 3.6364 L12: -1.1565 REMARK 3 L13: -4.3949 L23: 1.9627 REMARK 3 S TENSOR REMARK 3 S11: -0.0851 S12: 0.0304 S13: -0.4700 REMARK 3 S21: -0.0767 S22: -0.3667 S23: 0.1903 REMARK 3 S31: 0.0351 S32: -0.2124 S33: 0.4518 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 109 A 123 REMARK 3 ORIGIN FOR THE GROUP (A): 9.2539 12.4626 37.7472 REMARK 3 T TENSOR REMARK 3 T11: 0.1080 T22: 0.0485 REMARK 3 T33: 0.0670 T12: -0.0005 REMARK 3 T13: -0.0078 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 3.3462 L22: 2.2913 REMARK 3 L33: 1.2388 L12: 0.7768 REMARK 3 L13: -0.8416 L23: 1.1737 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: -0.0240 S13: 0.1250 REMARK 3 S21: -0.0202 S22: -0.1391 S23: 0.1135 REMARK 3 S31: -0.1320 S32: -0.0588 S33: 0.1730 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 124 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4646 7.0776 28.2735 REMARK 3 T TENSOR REMARK 3 T11: 0.1098 T22: 0.0233 REMARK 3 T33: 0.0497 T12: -0.0010 REMARK 3 T13: -0.0059 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 5.1199 L22: 1.8192 REMARK 3 L33: 1.7382 L12: 1.4310 REMARK 3 L13: -0.7286 L23: 1.3089 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.0459 S13: 0.0314 REMARK 3 S21: -0.3249 S22: -0.0588 S23: -0.0081 REMARK 3 S31: -0.2735 S32: -0.0475 S33: 0.0746 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): -4.4797 -0.6341 35.4571 REMARK 3 T TENSOR REMARK 3 T11: 0.1159 T22: 0.2907 REMARK 3 T33: 0.2165 T12: -0.2405 REMARK 3 T13: 0.1836 T23: -0.3121 REMARK 3 L TENSOR REMARK 3 L11: 25.8787 L22: 29.4821 REMARK 3 L33: 36.5114 L12: 1.5806 REMARK 3 L13: -3.6264 L23: 20.0991 REMARK 3 S TENSOR REMARK 3 S11: 0.0797 S12: -1.1916 S13: -0.6881 REMARK 3 S21: 2.0821 S22: -1.8302 S23: 1.9365 REMARK 3 S31: 2.4682 S32: -2.0050 S33: 1.7505 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 159 A 164 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9332 5.5210 34.0173 REMARK 3 T TENSOR REMARK 3 T11: -0.1870 T22: 0.1935 REMARK 3 T33: 0.1398 T12: -0.0200 REMARK 3 T13: -0.0134 T23: -0.2937 REMARK 3 L TENSOR REMARK 3 L11: 7.2358 L22: 33.3417 REMARK 3 L33: 12.3565 L12: 5.2403 REMARK 3 L13: -4.4754 L23: -15.2097 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: 0.0557 S13: 0.1018 REMARK 3 S21: -0.1002 S22: -0.5279 S23: 1.0961 REMARK 3 S31: 0.1539 S32: -1.0750 S33: 0.5363 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 165 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): -1.6894 12.7138 29.9779 REMARK 3 T TENSOR REMARK 3 T11: 0.0444 T22: 0.1034 REMARK 3 T33: 0.1442 T12: 0.1268 REMARK 3 T13: -0.1132 T23: -0.1805 REMARK 3 L TENSOR REMARK 3 L11: 32.8461 L22: 9.3603 REMARK 3 L33: 9.2180 L12: 16.8441 REMARK 3 L13: -0.5852 L23: -2.8791 REMARK 3 S TENSOR REMARK 3 S11: -0.1212 S12: 0.3709 S13: 1.0345 REMARK 3 S21: 0.0227 S22: -0.1719 S23: 0.6611 REMARK 3 S31: -0.5517 S32: -0.7249 S33: 0.2931 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2809 12.7385 27.4634 REMARK 3 T TENSOR REMARK 3 T11: 0.1341 T22: 0.0463 REMARK 3 T33: 0.0156 T12: 0.0517 REMARK 3 T13: -0.0778 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 4.5668 L22: 7.1278 REMARK 3 L33: 3.4680 L12: 3.1882 REMARK 3 L13: 1.6232 L23: 2.2255 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: 0.2144 S13: 0.1390 REMARK 3 S21: -0.5635 S22: -0.2179 S23: 0.1532 REMARK 3 S31: -0.4539 S32: -0.2588 S33: 0.2315 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CAN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-08. REMARK 100 THE RCSB ID CODE IS RCSB046548. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26654 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.200 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 47.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.50 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELX, COOT, MLPHARE, PHENIX, REFMAC, REMARK 200 ARP/WARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% V/V TACSIMATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.67900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.88400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.88400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.01850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.88400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.88400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.33950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.88400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.88400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.01850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.88400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.88400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.33950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 50.67900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 50.67900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 316 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 4 REMARK 465 ASN A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 140 REMARK 465 GLY A 141 REMARK 465 LYS A 142 REMARK 465 GLY A 143 REMARK 465 LYS A 144 REMARK 465 HIS A 145 REMARK 465 ALA A 146 REMARK 465 LYS A 147 REMARK 465 LEU A 148 REMARK 465 GLY A 149 REMARK 465 SER A 150 REMARK 465 ILE A 151 REMARK 465 TYR A 152 REMARK 465 ASN A 153 REMARK 465 PRO A 154 REMARK 465 LYS A 155 REMARK 465 GLY A 156 REMARK 465 TYR A 157 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 108 -50.79 -120.81 REMARK 500 ASN A 109 12.19 -150.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 318 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH A 319 DISTANCE = 5.08 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC20359.1 RELATED DB: TARGETDB DBREF 3CAN A 7 185 UNP A6L094 A6L094_BACV8 124 302 SEQADV 3CAN SER A 4 UNP A6L094 EXPRESSION TAG SEQADV 3CAN ASN A 5 UNP A6L094 EXPRESSION TAG SEQADV 3CAN ALA A 6 UNP A6L094 EXPRESSION TAG SEQRES 1 A 182 SER ASN ALA GLY GLY GLY VAL THR PHE CYS GLY GLY GLU SEQRES 2 A 182 PRO LEU LEU HIS PRO GLU PHE LEU ILE ASP ILE LEU LYS SEQRES 3 A 182 ARG CYS GLY GLN GLN GLY ILE HIS ARG ALA VAL ASP THR SEQRES 4 A 182 THR LEU LEU ALA ARG LYS GLU THR VAL ASP GLU VAL MSE SEQRES 5 A 182 ARG ASN CYS GLU LEU LEU LEU ILE ASP LEU LYS SER MSE SEQRES 6 A 182 ASP SER THR VAL HIS GLN THR PHE CYS ASP VAL PRO ASN SEQRES 7 A 182 GLU LEU ILE LEU LYS ASN ILE ARG ARG VAL ALA GLU ALA SEQRES 8 A 182 ASP PHE PRO TYR TYR ILE ARG ILE PRO LEU ILE GLU GLY SEQRES 9 A 182 VAL ASN ALA ASP GLU LYS ASN ILE LYS LEU SER ALA GLU SEQRES 10 A 182 PHE LEU ALA SER LEU PRO ARG HIS PRO GLU ILE ILE ASN SEQRES 11 A 182 LEU LEU PRO TYR HIS ASP ILE GLY LYS GLY LYS HIS ALA SEQRES 12 A 182 LYS LEU GLY SER ILE TYR ASN PRO LYS GLY TYR LYS MSE SEQRES 13 A 182 GLN THR PRO SER GLU GLU VAL GLN GLN GLN CYS ILE GLN SEQRES 14 A 182 ILE LEU THR ASP TYR GLY LEU LYS ALA THR ILE GLY GLY MODRES 3CAN MSE A 55 MET SELENOMETHIONINE MODRES 3CAN MSE A 68 MET SELENOMETHIONINE MODRES 3CAN MSE A 159 MET SELENOMETHIONINE HET MSE A 55 8 HET MSE A 68 8 HET MSE A 159 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 HOH *174(H2 O) HELIX 1 1 GLU A 16 LEU A 19 5 4 HELIX 2 2 HIS A 20 GLN A 34 1 15 HELIX 3 3 ARG A 47 ASN A 57 1 11 HELIX 4 4 ASP A 69 ASP A 78 1 10 HELIX 5 5 ASN A 81 ALA A 94 1 14 HELIX 6 6 ASP A 111 LEU A 125 1 15 HELIX 7 7 SER A 163 TYR A 177 1 15 SHEET 1 A 6 VAL A 10 PHE A 12 0 SHEET 2 A 6 ARG A 38 ASP A 41 1 O ASP A 41 N PHE A 12 SHEET 3 A 6 LEU A 60 ASP A 64 1 O LEU A 62 N VAL A 40 SHEET 4 A 6 TYR A 98 LEU A 104 1 O TYR A 99 N LEU A 61 SHEET 5 A 6 ILE A 131 PRO A 136 1 O ASN A 133 N ILE A 102 SHEET 6 A 6 ALA A 181 ILE A 183 1 O THR A 182 N LEU A 134 LINK C VAL A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N ARG A 56 1555 1555 1.33 LINK C SER A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N ASP A 69 1555 1555 1.33 LINK C LYS A 158 N MSE A 159 1555 1555 1.33 LINK C MSE A 159 N GLN A 160 1555 1555 1.33 CRYST1 73.768 73.768 101.358 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013556 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013556 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009866 0.00000