PDB Short entry for 3CBX HEADER PROTEIN BINDING 23-FEB-08 3CBX TITLE THE DVL2 PDZ DOMAIN IN COMPLEX WITH THE C1 INHIBITORY PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISHEVELLED-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PDZ DOMAIN (UNP RESIDUES 264-354); COMPND 5 SYNONYM: DSH HOMOLOG 2, SEGMENT POLARITY PROTEIN DISHEVELLED HOMOLOG COMPND 6 DVL-2; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DVL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PDZ DOMAIN, PHAGE DERIVED HIGH AFFINITY LIGAND, DEVELOPMENTAL KEYWDS 2 PROTEIN, PHOSPHOPROTEIN, WNT SIGNALING PATHWAY, SIGNALING PROTEIN, KEYWDS 3 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.A.APPLETON,C.WIESMANN REVDAT 7 30-AUG-23 3CBX 1 REMARK REVDAT 6 20-OCT-21 3CBX 1 SEQADV REVDAT 5 25-OCT-17 3CBX 1 REMARK REVDAT 4 13-JUL-11 3CBX 1 VERSN REVDAT 3 31-MAR-09 3CBX 1 JRNL REVDAT 2 17-MAR-09 3CBX 1 JRNL REVDAT 1 03-MAR-09 3CBX 0 JRNL AUTH Y.ZHANG,B.A.APPLETON,C.WIESMANN,T.LAU,M.COSTA,R.N.HANNOUSH, JRNL AUTH 2 S.S.SIDHU JRNL TITL INHIBITION OF WNT SIGNALING BY DISHEVELLED PDZ PEPTIDES JRNL REF NAT.CHEM.BIOL. V. 5 217 2009 JRNL REFN ISSN 1552-4450 JRNL PMID 19252499 JRNL DOI 10.1038/NCHEMBIO.152 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 22027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1158 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 25 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1233 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1558 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.83000 REMARK 3 B22 (A**2) : 1.54000 REMARK 3 B33 (A**2) : 0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.417 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1636 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1098 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2217 ; 1.536 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2678 ; 0.899 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 5.922 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;39.185 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 279 ;11.496 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;17.276 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 239 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1831 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 328 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 247 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1081 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 757 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 891 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 93 ; 0.167 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.228 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 61 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1316 ; 3.583 ; 2.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 435 ; 0.795 ; 2.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1621 ; 4.100 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 741 ; 3.763 ; 2.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 591 ; 4.857 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 260 A 355 REMARK 3 RESIDUE RANGE : B 356 B 364 REMARK 3 ORIGIN FOR THE GROUP (A): -6.4209 11.5883 -0.8107 REMARK 3 T TENSOR REMARK 3 T11: -0.0743 T22: -0.0894 REMARK 3 T33: -0.1037 T12: -0.0082 REMARK 3 T13: -0.0026 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 2.1373 L22: 0.9333 REMARK 3 L33: 0.7083 L12: -0.3956 REMARK 3 L13: 0.6533 L23: -0.0526 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: 0.0023 S13: -0.1250 REMARK 3 S21: 0.0161 S22: 0.0464 S23: 0.0228 REMARK 3 S31: 0.0562 S32: -0.0377 S33: -0.0424 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 261 B 355 REMARK 3 RESIDUE RANGE : A 356 A 364 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0078 7.8665 23.7650 REMARK 3 T TENSOR REMARK 3 T11: -0.0071 T22: -0.0676 REMARK 3 T33: -0.0746 T12: -0.0130 REMARK 3 T13: -0.0061 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 4.2190 L22: 3.8043 REMARK 3 L33: 4.3537 L12: -1.5839 REMARK 3 L13: 2.1702 L23: -1.2590 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: 0.1682 S13: 0.1368 REMARK 3 S21: 0.3328 S22: -0.1173 S23: -0.1033 REMARK 3 S31: -0.0761 S32: 0.2032 S33: 0.1311 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046589. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.80 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23342 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.46300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1L6O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% 2-METHYL-2,4-PENTANEDIOL, 0.1 M REMARK 280 SODIUM ACETATE, PH 4.8, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K, PH 4.80 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.60700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.90900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.55600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.90900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.60700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.55600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 260 REMARK 465 ASN B 287 REMARK 465 GLU B 288 REMARK 465 ARG B 289 REMARK 465 GLY B 290 REMARK 465 ASP B 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 321 -123.49 48.36 REMARK 500 ASN B 264 75.77 53.66 REMARK 500 ASN B 321 -122.44 52.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A2004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CBY RELATED DB: PDB REMARK 900 RELATED ID: 3CBZ RELATED DB: PDB REMARK 900 RELATED ID: 3CC0 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PEPTIDE LIGAND WAS FUSED TO THE C TERMINUS OF THE LINKER DBREF 3CBX A 264 354 UNP O14641 DVL2_HUMAN 264 354 DBREF 3CBX B 264 354 UNP O14641 DVL2_HUMAN 264 354 SEQADV 3CBX GLY A 260 UNP O14641 EXPRESSION TAG SEQADV 3CBX SER A 261 UNP O14641 EXPRESSION TAG SEQADV 3CBX HIS A 262 UNP O14641 EXPRESSION TAG SEQADV 3CBX MET A 263 UNP O14641 EXPRESSION TAG SEQADV 3CBX SER A 354 UNP O14641 CYS 354 ENGINEERED MUTATION SEQADV 3CBX GLY A 355 UNP O14641 LINKER SEQADV 3CBX GLY A 356 UNP O14641 LINKER SEQADV 3CBX GLY A 357 UNP O14641 LINKER SEQADV 3CBX TRP A 358 UNP O14641 SEE REMARK 999 SEQADV 3CBX LYS A 359 UNP O14641 SEE REMARK 999 SEQADV 3CBX TRP A 360 UNP O14641 SEE REMARK 999 SEQADV 3CBX TYR A 361 UNP O14641 SEE REMARK 999 SEQADV 3CBX GLY A 362 UNP O14641 SEE REMARK 999 SEQADV 3CBX TRP A 363 UNP O14641 SEE REMARK 999 SEQADV 3CBX PHE A 364 UNP O14641 SEE REMARK 999 SEQADV 3CBX GLY B 260 UNP O14641 EXPRESSION TAG SEQADV 3CBX SER B 261 UNP O14641 EXPRESSION TAG SEQADV 3CBX HIS B 262 UNP O14641 EXPRESSION TAG SEQADV 3CBX MET B 263 UNP O14641 EXPRESSION TAG SEQADV 3CBX SER B 354 UNP O14641 CYS 354 ENGINEERED MUTATION SEQADV 3CBX GLY B 355 UNP O14641 LINKER SEQADV 3CBX GLY B 356 UNP O14641 LINKER SEQADV 3CBX GLY B 357 UNP O14641 LINKER SEQADV 3CBX TRP B 358 UNP O14641 SEE REMARK 999 SEQADV 3CBX LYS B 359 UNP O14641 SEE REMARK 999 SEQADV 3CBX TRP B 360 UNP O14641 SEE REMARK 999 SEQADV 3CBX TYR B 361 UNP O14641 SEE REMARK 999 SEQADV 3CBX GLY B 362 UNP O14641 SEE REMARK 999 SEQADV 3CBX TRP B 363 UNP O14641 SEE REMARK 999 SEQADV 3CBX PHE B 364 UNP O14641 SEE REMARK 999 SEQRES 1 A 105 GLY SER HIS MET ASN ILE ILE THR VAL THR LEU ASN MET SEQRES 2 A 105 GLU LYS TYR ASN PHE LEU GLY ILE SER ILE VAL GLY GLN SEQRES 3 A 105 SER ASN GLU ARG GLY ASP GLY GLY ILE TYR ILE GLY SER SEQRES 4 A 105 ILE MET LYS GLY GLY ALA VAL ALA ALA ASP GLY ARG ILE SEQRES 5 A 105 GLU PRO GLY ASP MET LEU LEU GLN VAL ASN ASP MET ASN SEQRES 6 A 105 PHE GLU ASN MET SER ASN ASP ASP ALA VAL ARG VAL LEU SEQRES 7 A 105 ARG ASP ILE VAL HIS LYS PRO GLY PRO ILE VAL LEU THR SEQRES 8 A 105 VAL ALA LYS SER GLY GLY GLY TRP LYS TRP TYR GLY TRP SEQRES 9 A 105 PHE SEQRES 1 B 105 GLY SER HIS MET ASN ILE ILE THR VAL THR LEU ASN MET SEQRES 2 B 105 GLU LYS TYR ASN PHE LEU GLY ILE SER ILE VAL GLY GLN SEQRES 3 B 105 SER ASN GLU ARG GLY ASP GLY GLY ILE TYR ILE GLY SER SEQRES 4 B 105 ILE MET LYS GLY GLY ALA VAL ALA ALA ASP GLY ARG ILE SEQRES 5 B 105 GLU PRO GLY ASP MET LEU LEU GLN VAL ASN ASP MET ASN SEQRES 6 B 105 PHE GLU ASN MET SER ASN ASP ASP ALA VAL ARG VAL LEU SEQRES 7 B 105 ARG ASP ILE VAL HIS LYS PRO GLY PRO ILE VAL LEU THR SEQRES 8 B 105 VAL ALA LYS SER GLY GLY GLY TRP LYS TRP TYR GLY TRP SEQRES 9 B 105 PHE HET MPD A2001 8 HET MPD A2002 8 HET CL A2004 1 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM CL CHLORIDE ION FORMUL 3 MPD 2(C6 H14 O2) FORMUL 5 CL CL 1- FORMUL 6 HOH *121(H2 O) HELIX 1 1 GLY A 303 GLY A 309 1 7 HELIX 2 2 SER A 329 HIS A 342 1 14 HELIX 3 3 GLY B 303 GLY B 309 1 7 HELIX 4 4 GLU B 326 MET B 328 5 3 HELIX 5 5 SER B 329 LYS B 343 1 15 SHEET 1 A 4 ILE A 265 LEU A 270 0 SHEET 2 A 4 ILE A 347 ALA A 352 -1 O LEU A 349 N VAL A 268 SHEET 3 A 4 MET A 316 VAL A 320 -1 N GLN A 319 O THR A 350 SHEET 4 A 4 MET A 323 ASN A 324 -1 O MET A 323 N VAL A 320 SHEET 1 B 6 ILE A 265 LEU A 270 0 SHEET 2 B 6 ILE A 347 ALA A 352 -1 O LEU A 349 N VAL A 268 SHEET 3 B 6 MET A 316 VAL A 320 -1 N GLN A 319 O THR A 350 SHEET 4 B 6 GLY A 290 ILE A 299 -1 N ILE A 294 O LEU A 317 SHEET 5 B 6 ILE A 280 ASN A 287 -1 N VAL A 283 O TYR A 295 SHEET 6 B 6 TRP B 358 PHE B 364 -1 O TYR B 361 N ILE A 282 SHEET 1 C 6 TRP A 358 PHE A 364 0 SHEET 2 C 6 ILE B 280 GLN B 285 -1 O ILE B 282 N TYR A 361 SHEET 3 C 6 GLY B 293 ILE B 299 -1 O TYR B 295 N VAL B 283 SHEET 4 C 6 MET B 316 VAL B 320 -1 O LEU B 317 N ILE B 294 SHEET 5 C 6 ILE B 347 ALA B 352 -1 O THR B 350 N LEU B 318 SHEET 6 C 6 ILE B 265 LEU B 270 -1 N LEU B 270 O ILE B 347 SHEET 1 D 5 TRP A 358 PHE A 364 0 SHEET 2 D 5 ILE B 280 GLN B 285 -1 O ILE B 282 N TYR A 361 SHEET 3 D 5 GLY B 293 ILE B 299 -1 O TYR B 295 N VAL B 283 SHEET 4 D 5 MET B 316 VAL B 320 -1 O LEU B 317 N ILE B 294 SHEET 5 D 5 MET B 323 ASN B 324 -1 O MET B 323 N VAL B 320 SITE 1 AC1 4 GLY A 297 GLY A 314 TRP A 358 HOH A1031 SITE 1 AC2 7 SER A 298 GLN A 319 ASN A 321 TRP A 360 SITE 2 AC2 7 HOH A1026 TRP B 360 TRP B 363 SITE 1 AC3 3 THR A 267 ARG A 310 TRP B 360 CRYST1 51.214 61.112 65.818 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019526 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016363 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015193 0.00000