PDB Short entry for 3CD3 HEADER TRANSFERASE 26-FEB-08 3CD3 TITLE CRYSTAL STRUCTURE OF PHOSPHORYLATED HUMAN FELINE SARCOMA VIRAL TITLE 2 ONCOGENE HOMOLOGUE (V-FES) IN COMPLEX WITH STAUROSPORINE AND A TITLE 3 CONSENSUS PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 448-822; COMPND 5 SYNONYM: C-FES; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SYNTHETIC PEPTIDE; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FES, FPS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3-YOP-PPASE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS FES, V-FES, FUJINAMI, AVIAN SARCOMA, VIRAL, ONCOGENE, FELINE SARCOMA KEYWDS 2 VIRUS, ACTIVE, SGC, STRUCTURAL GENOMICS CONSORTIUM, ATP-BINDING, KEYWDS 3 KINASE, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, PROTO-ONCOGENE, SH2 KEYWDS 4 DOMAIN, TRANSFERASE, TYROSINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,E.SALAH,C.COOPER,S.S.PICAUD,J.M.ELKINS,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,S.KNAPP,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 5 30-AUG-23 3CD3 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 3CD3 1 VERSN REVDAT 3 24-FEB-09 3CD3 1 VERSN REVDAT 2 16-SEP-08 3CD3 1 JRNL REVDAT 1 25-MAR-08 3CD3 0 JRNL AUTH P.FILIPPAKOPOULOS,M.KOFLER,O.HANTSCHEL,G.D.GISH,F.GREBIEN, JRNL AUTH 2 E.SALAH,P.NEUDECKER,L.E.KAY,B.E.TURK,G.SUPERTI-FURGA, JRNL AUTH 3 T.PAWSON,S.KNAPP JRNL TITL STRUCTURAL COUPLING OF SH2-KINASE DOMAINS LINKS FES AND ABL JRNL TITL 2 SUBSTRATE RECOGNITION AND KINASE ACTIVATION JRNL REF CELL(CAMBRIDGE,MASS.) V. 134 793 2008 JRNL REFN ISSN 0092-8674 JRNL PMID 18775312 JRNL DOI 10.1016/J.CELL.2008.07.047 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 28827 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1447 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2005 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 107 REMARK 3 SOLVENT ATOMS : 307 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.30000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.129 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.831 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3004 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2015 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4105 ; 1.603 ; 2.030 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4844 ; 1.507 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 350 ; 6.609 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;35.660 ;23.468 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 480 ;13.986 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;13.834 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 453 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3229 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 583 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1786 ; 3.492 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 721 ; 1.129 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2868 ; 4.704 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1218 ; 8.370 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1237 ;10.374 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 446 A 515 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1020 40.0650 0.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.2301 T22: 0.1851 REMARK 3 T33: 0.3009 T12: 0.0445 REMARK 3 T13: 0.0206 T23: 0.0685 REMARK 3 L TENSOR REMARK 3 L11: 2.9759 L22: 3.8198 REMARK 3 L33: 5.6475 L12: -0.2773 REMARK 3 L13: 1.0414 L23: 3.4227 REMARK 3 S TENSOR REMARK 3 S11: -0.0611 S12: -0.2303 S13: 0.6661 REMARK 3 S21: 0.0628 S22: 0.1207 S23: 0.1370 REMARK 3 S31: -0.6585 S32: -0.0467 S33: -0.0596 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 520 A 638 REMARK 3 ORIGIN FOR THE GROUP (A): 3.0330 27.9370 8.5220 REMARK 3 T TENSOR REMARK 3 T11: -0.1036 T22: 0.0837 REMARK 3 T33: 0.0277 T12: -0.0035 REMARK 3 T13: -0.0018 T23: 0.1219 REMARK 3 L TENSOR REMARK 3 L11: 1.1204 L22: 1.6691 REMARK 3 L33: 2.0647 L12: 0.1721 REMARK 3 L13: -0.3401 L23: -0.3418 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: 0.3274 S13: 0.4850 REMARK 3 S21: -0.1425 S22: 0.1134 S23: 0.0541 REMARK 3 S31: -0.3521 S32: -0.0844 S33: -0.0853 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 639 A 821 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1620 13.2620 35.0550 REMARK 3 T TENSOR REMARK 3 T11: -0.1647 T22: -0.0972 REMARK 3 T33: -0.1336 T12: 0.0136 REMARK 3 T13: -0.0160 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.8951 L22: 1.5713 REMARK 3 L33: 1.6833 L12: -0.0222 REMARK 3 L13: 0.0679 L23: -0.4629 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: -0.1792 S13: 0.0510 REMARK 3 S21: 0.2513 S22: 0.0239 S23: -0.0776 REMARK 3 S31: 0.0249 S32: -0.0190 S33: -0.0305 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CD3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046628. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29000 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 15.347 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : 0.08200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.47200 REMARK 200 R SYM FOR SHELL (I) : 0.47200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3BKB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG MME 2000, 0.15M SODIUM REMARK 280 BROMIDE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.72550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.31600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.45250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.31600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.72550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.45250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMERIC COMPLEX BETWEEN PROTEIN REMARK 300 (CHAIN A) AND THE CONSENSUS PEPTIDE (CHAIN B). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 486 REMARK 465 GLY A 487 REMARK 465 LYS A 488 REMARK 465 LEU A 496 REMARK 465 TRP A 497 REMARK 465 ASP A 498 REMARK 465 GLY A 499 REMARK 465 LEU A 500 REMARK 465 GLN A 507 REMARK 465 SER A 508 REMARK 465 LEU A 509 REMARK 465 ASP A 510 REMARK 465 GLU A 516 REMARK 465 GLY A 517 REMARK 465 GLU A 518 REMARK 465 GLY A 519 REMARK 465 THR A 538 REMARK 465 LYS A 539 REMARK 465 LYS A 540 REMARK 465 GLU A 594 REMARK 465 THR A 595 REMARK 465 LEU A 596 REMARK 465 PRO A 597 REMARK 465 ARG A 822 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 452 CD OE1 NE2 REMARK 470 ARG A 467 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 472 CD OE1 OE2 REMARK 470 SER A 477 OG REMARK 470 ARG A 483 CZ NH1 NH2 REMARK 470 GLN A 489 CG CD OE1 NE2 REMARK 470 GLU A 490 CG CD OE1 OE2 REMARK 470 VAL A 495 CG1 CG2 REMARK 470 ARG A 502 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 511 CG OD1 ND2 REMARK 470 LEU A 512 CG CD1 CD2 REMARK 470 ARG A 514 CG CD NE CZ NH1 NH2 REMARK 470 SER A 532 OG REMARK 470 GLN A 534 CG CD OE1 NE2 REMARK 470 GLN A 535 CG CD OE1 NE2 REMARK 470 SER A 541 OG REMARK 470 ARG A 547 CZ NH1 NH2 REMARK 470 ARG A 593 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 598 CG CD REMARK 470 ASP A 599 CG OD1 OD2 REMARK 470 LYS A 601 CG CD CE NZ REMARK 470 GLU A 693 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 217 O HOH A 249 1.92 REMARK 500 O GLY A 717 O HOH A 310 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 475 -67.59 -92.99 REMARK 500 SER A 615 111.76 -163.17 REMARK 500 ARG A 682 -7.23 74.09 REMARK 500 ASP A 683 44.27 -140.62 REMARK 500 ASP A 701 76.94 36.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STU A 903 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CBL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN FELINE SARCOMA VIRAL ONCOGENE HOMOLOGUE REMARK 900 (V-FES) IN COMPLEX WITH STAUROSPORINE AND A CONSENSUS PEPTIDE DBREF 3CD3 A 448 822 UNP P07332 FES_HUMAN 448 822 DBREF 3CD3 B 1 5 PDB 3CBL 3CBL 1 5 SEQADV 3CD3 SER A 446 UNP P07332 EXPRESSION TAG SEQADV 3CD3 MET A 447 UNP P07332 EXPRESSION TAG SEQRES 1 A 377 SER MET ILE PRO GLU VAL GLN LYS PRO LEU HIS GLU GLN SEQRES 2 A 377 LEU TRP TYR HIS GLY ALA ILE PRO ARG ALA GLU VAL ALA SEQRES 3 A 377 GLU LEU LEU VAL HIS SER GLY ASP PHE LEU VAL ARG GLU SEQRES 4 A 377 SER GLN GLY LYS GLN GLU TYR VAL LEU SER VAL LEU TRP SEQRES 5 A 377 ASP GLY LEU PRO ARG HIS PHE ILE ILE GLN SER LEU ASP SEQRES 6 A 377 ASN LEU TYR ARG LEU GLU GLY GLU GLY PHE PRO SER ILE SEQRES 7 A 377 PRO LEU LEU ILE ASP HIS LEU LEU SER THR GLN GLN PRO SEQRES 8 A 377 LEU THR LYS LYS SER GLY VAL VAL LEU HIS ARG ALA VAL SEQRES 9 A 377 PRO LYS ASP LYS TRP VAL LEU ASN HIS GLU ASP LEU VAL SEQRES 10 A 377 LEU GLY GLU GLN ILE GLY ARG GLY ASN PHE GLY GLU VAL SEQRES 11 A 377 PHE SER GLY ARG LEU ARG ALA ASP ASN THR LEU VAL ALA SEQRES 12 A 377 VAL LYS SER CYS ARG GLU THR LEU PRO PRO ASP LEU LYS SEQRES 13 A 377 ALA LYS PHE LEU GLN GLU ALA ARG ILE LEU LYS GLN TYR SEQRES 14 A 377 SER HIS PRO ASN ILE VAL ARG LEU ILE GLY VAL CYS THR SEQRES 15 A 377 GLN LYS GLN PRO ILE TYR ILE VAL MET GLU LEU VAL GLN SEQRES 16 A 377 GLY GLY ASP PHE LEU THR PHE LEU ARG THR GLU GLY ALA SEQRES 17 A 377 ARG LEU ARG VAL LYS THR LEU LEU GLN MET VAL GLY ASP SEQRES 18 A 377 ALA ALA ALA GLY MET GLU TYR LEU GLU SER LYS CYS CYS SEQRES 19 A 377 ILE HIS ARG ASP LEU ALA ALA ARG ASN CYS LEU VAL THR SEQRES 20 A 377 GLU LYS ASN VAL LEU LYS ILE SER ASP PHE GLY MET SER SEQRES 21 A 377 ARG GLU GLU ALA ASP GLY VAL PTR ALA ALA SER GLY GLY SEQRES 22 A 377 LEU ARG GLN VAL PRO VAL LYS TRP THR ALA PRO GLU ALA SEQRES 23 A 377 LEU ASN TYR GLY ARG TYR SER SER GLU SER ASP VAL TRP SEQRES 24 A 377 SER PHE GLY ILE LEU LEU TRP GLU THR PHE SER LEU GLY SEQRES 25 A 377 ALA SER PRO TYR PRO ASN LEU SER ASN GLN GLN THR ARG SEQRES 26 A 377 GLU PHE VAL GLU LYS GLY GLY ARG LEU PRO CYS PRO GLU SEQRES 27 A 377 LEU CYS PRO ASP ALA VAL PHE ARG LEU MET GLU GLN CYS SEQRES 28 A 377 TRP ALA TYR GLU PRO GLY GLN ARG PRO SER PHE SER THR SEQRES 29 A 377 ILE TYR GLN GLU LEU GLN SER ILE ARG LYS ARG HIS ARG SEQRES 1 B 6 ACE ILE TYR GLU SER LEU MODRES 3CD3 PTR A 713 TYR O-PHOSPHOTYROSINE HET PTR A 713 16 HET ACE B 0 3 HET CL A 904 1 HET CL A 905 1 HET STU A 901 35 HET STU A 902 35 HET STU A 903 35 HETNAM PTR O-PHOSPHOTYROSINE HETNAM ACE ACETYL GROUP HETNAM CL CHLORIDE ION HETNAM STU STAUROSPORINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR C9 H12 N O6 P FORMUL 2 ACE C2 H4 O FORMUL 3 CL 2(CL 1-) FORMUL 5 STU 3(C28 H26 N4 O3) FORMUL 8 HOH *307(H2 O) HELIX 1 1 PRO A 449 LYS A 453 5 5 HELIX 2 2 PRO A 454 GLN A 458 5 5 HELIX 3 3 PRO A 466 LEU A 474 1 9 HELIX 4 4 SER A 522 GLN A 534 1 13 HELIX 5 5 ASN A 557 GLU A 559 5 3 HELIX 6 6 PRO A 598 PHE A 604 1 7 HELIX 7 7 LEU A 605 LYS A 612 1 8 HELIX 8 8 ASP A 643 GLY A 652 1 10 HELIX 9 9 ALA A 653 LEU A 655 5 3 HELIX 10 10 ARG A 656 LYS A 677 1 22 HELIX 11 11 ALA A 685 ARG A 687 5 3 HELIX 12 12 LYS A 725 THR A 727 5 3 HELIX 13 13 ALA A 728 GLY A 735 1 8 HELIX 14 14 SER A 739 SER A 755 1 17 HELIX 15 15 SER A 765 LYS A 775 1 11 HELIX 16 16 PRO A 786 TRP A 797 1 12 HELIX 17 17 GLU A 800 ARG A 804 5 5 HELIX 18 18 SER A 806 HIS A 821 1 16 SHEET 1 A 4 HIS A 503 ILE A 506 0 SHEET 2 A 4 TYR A 491 SER A 494 -1 N LEU A 493 O PHE A 504 SHEET 3 A 4 ASP A 479 GLU A 484 -1 N ARG A 483 O VAL A 492 SHEET 4 A 4 ARG A 547 ALA A 548 1 O ARG A 547 N PHE A 480 SHEET 1 B 5 LEU A 561 ARG A 569 0 SHEET 2 B 5 GLU A 574 LEU A 580 -1 O SER A 577 N GLY A 564 SHEET 3 B 5 LEU A 586 SER A 591 -1 O VAL A 589 N PHE A 576 SHEET 4 B 5 TYR A 633 GLU A 637 -1 O MET A 636 N ALA A 588 SHEET 5 B 5 LEU A 622 CYS A 626 -1 N GLY A 624 O VAL A 635 SHEET 1 C 2 CYS A 679 ILE A 680 0 SHEET 2 C 2 ARG A 706 GLU A 707 -1 O ARG A 706 N ILE A 680 SHEET 1 D 2 CYS A 689 VAL A 691 0 SHEET 2 D 2 LEU A 697 ILE A 699 -1 O LYS A 698 N LEU A 690 SHEET 1 E 2 VAL A 712 ALA A 714 0 SHEET 2 E 2 ARG A 736 SER A 738 -1 O TYR A 737 N PTR A 713 SHEET 1 F 2 ARG A 720 PRO A 723 0 SHEET 2 F 2 TYR B 2 LEU B 5 -1 O GLU B 3 N VAL A 722 LINK C VAL A 712 N PTR A 713 1555 1555 1.33 LINK C PTR A 713 N ALA A 714 1555 1555 1.35 LINK C ACE B 0 N ILE B 1 1555 1555 1.31 CISPEP 1 GLN A 630 PRO A 631 0 -0.94 SITE 1 AC1 3 ASN A 766 GLN A 767 ARG A 770 SITE 1 AC3 14 ILE A 567 GLY A 568 ARG A 569 ALA A 588 SITE 2 AC3 14 GLU A 607 MET A 636 GLU A 637 LEU A 638 SITE 3 AC3 14 GLY A 642 ASP A 643 ARG A 687 LEU A 690 SITE 4 AC3 14 SER A 700 ASP A 701 SITE 1 AC4 5 ASP A 583 THR A 585 ARG A 621 LEU A 622 SITE 2 AC4 5 ILE A 623 SITE 1 AC5 5 HIS A 456 LYS A 553 TRP A 554 GLU A 559 SITE 2 AC5 5 ARG A 581 CRYST1 35.451 76.905 150.632 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028208 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013003 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006639 0.00000