PDB Short entry for 3CKI HEADER HYDROLASE, HYDROLASE INHIBITOR 15-MAR-08 3CKI TITLE CRYSTAL STRUCTURE OF THE TACE-N-TIMP-3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADAM 17; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TACE CATALYTIC DOMAIN (UNP RESIDUES 219-474); COMPND 5 SYNONYM: A DISINTEGRIN AND METALLOPROTEINASE DOMAIN 17, TNF-ALPHA- COMPND 6 CONVERTING ENZYME, TNF-ALPHA CONVERTASE, SNAKE VENOM-LIKE PROTEASE, COMPND 7 CD156B ANTIGEN; COMPND 8 EC: 3.4.24.86; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: METALLOPROTEINASE INHIBITOR 3; COMPND 13 CHAIN: B; COMPND 14 FRAGMENT: N-TIMP-3 (UNP RESIDUES 24-144); COMPND 15 SYNONYM: TIMP-3, TISSUE INHIBITOR OF METALLOPROTEINASES 3, PROTEIN COMPND 16 MIG-5; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: ADAM17, CSVP, TACE; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 8 EXPRESSION_SYSTEM_ORGAN: OVARY; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 GENE: TIMP3; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI KEYWDS EXTRA-CELLULAR MATRIX, CATALYTIC ZINC, SA-SB LOOP, ALTERNATIVE KEYWDS 2 SPLICING, CLEAVAGE ON PAIR OF BASIC RESIDUES, GLYCOPROTEIN, KEYWDS 3 MEMBRANE, METAL-BINDING, METALLOPROTEASE, NOTCH SIGNALING PATHWAY, KEYWDS 4 PHOSPHOPROTEIN, PROTEASE, SH3-BINDING, TRANSMEMBRANE, ZYMOGEN, KEYWDS 5 DISEASE MUTATION, EXTRACELLULAR MATRIX, METALLOENZYME INHIBITOR, KEYWDS 6 METALLOPROTEASE INHIBITOR, SECRETED, SENSORY TRANSDUCTION, VISION, KEYWDS 7 HYDROLASE, HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR M.WISNIEWSKA,P.GOETTIG,K.MASKOS,E.BELOUSKI,D.WINTERS,R.HECHT,R.BLACK, AUTHOR 2 W.BODE REVDAT 5 30-AUG-23 3CKI 1 REMARK REVDAT 4 20-OCT-21 3CKI 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 3CKI 1 VERSN REVDAT 2 26-AUG-08 3CKI 1 JRNL REVDAT 1 05-AUG-08 3CKI 0 JRNL AUTH M.WISNIEWSKA,P.GOETTIG,K.MASKOS,E.BELOUSKI,D.WINTERS, JRNL AUTH 2 R.HECHT,R.BLACK,W.BODE JRNL TITL STRUCTURAL DETERMINANTS OF THE ADAM INHIBITION BY TIMP-3: JRNL TITL 2 CRYSTAL STRUCTURE OF THE TACE-N-TIMP-3 COMPLEX. JRNL REF J.MOL.BIOL. V. 381 1307 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18638486 JRNL DOI 10.1016/J.JMB.2008.06.088 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1392278.820 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 18136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 922 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1585 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 100 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.037 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3009 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.60000 REMARK 3 B22 (A**2) : 1.93000 REMARK 3 B33 (A**2) : -1.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.32 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.380 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.810 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.350 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.720 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.29 REMARK 3 BSOL : 52.38 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CKI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-06; 13-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG; MPG/DESY, REMARK 200 HAMBURG REMARK 200 BEAMLINE : BW6; BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2820; 1.280,1.2825,1.2790 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM; MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16708 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.16700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 8.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1BKC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE/ACETIC ACID, 25% REMARK 280 POLYETHYLENE GLYCOL 3,350, PH 4.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 309K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.36400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.22350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.22350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 117.54600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.22350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.22350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.18200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.22350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.22350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 117.54600 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.22350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.22350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.18200 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.36400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 VAL B 24 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 292 CE NZ REMARK 480 GLU A 308 CD OE1 OE2 REMARK 480 LYS A 309 CD CE NZ REMARK 480 LYS A 331 CD CE NZ REMARK 480 GLU A 427 CG CD OE1 OE2 REMARK 480 VAL A 440 CA C O CB CG1 CG2 REMARK 480 LYS A 460 CE NZ REMARK 480 SER B 6 N REMARK 480 GLN B 9 CB CG CD OE1 NE2 REMARK 480 ARG B 20 CG CD NE REMARK 480 LYS B 22 CG CD CE NZ REMARK 480 VAL B 23 CB CG1 CG2 REMARK 480 LYS B 26 CB CG CD CE NZ REMARK 480 LYS B 27 CG CD CE NZ REMARK 480 LEU B 28 CB CG CD1 CD2 REMARK 480 VAL B 29 CB CG1 CG2 REMARK 480 LYS B 30 CE NZ REMARK 480 GLY B 32 N CA REMARK 480 LYS B 42 CB CG CD CE NZ REMARK 480 LYS B 45 CB CG CD CE NZ REMARK 480 LYS B 52 CD CE NZ REMARK 480 PRO B 54 CB CG CD REMARK 480 VAL B 74 CB CG1 CG2 REMARK 480 TYR B 116 OH REMARK 480 LEU B 118 CG CD1 CD2 REMARK 480 ASN B 121 CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 237 O HOH A 662 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 220 51.42 -59.98 REMARK 500 ALA A 270 -119.85 -127.91 REMARK 500 PRO A 293 142.33 -39.51 REMARK 500 CYS A 365 116.90 80.64 REMARK 500 ALA A 368 132.37 -36.46 REMARK 500 LEU A 380 30.02 -98.46 REMARK 500 ASN A 381 48.30 -87.66 REMARK 500 ALA A 421 14.31 34.62 REMARK 500 ASP A 428 1.33 -61.62 REMARK 500 VAL A 440 123.40 17.11 REMARK 500 SER A 441 -159.31 42.47 REMARK 500 SER B 6 -136.96 -154.88 REMARK 500 ALA B 21 168.96 -46.79 REMARK 500 LYS B 26 -165.69 -170.56 REMARK 500 MET B 44 -95.99 -145.97 REMARK 500 THR B 51 -75.38 -70.74 REMARK 500 LYS B 52 -71.07 -33.77 REMARK 500 HIS B 55 108.06 66.79 REMARK 500 GLN B 57 -31.99 -131.41 REMARK 500 LEU B 72 -151.69 -111.34 REMARK 500 ASN B 75 43.81 27.49 REMARK 500 LYS B 76 -157.52 -110.91 REMARK 500 LEU B 104 108.16 -50.91 REMARK 500 TYR B 114 35.81 -72.60 REMARK 500 LEU B 118 4.48 58.10 REMARK 500 CYS B 120 -52.70 -17.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 342 OD1 REMARK 620 2 PHE A 343 O 93.6 REMARK 620 3 ASN A 389 OD1 120.4 141.2 REMARK 620 4 HOH A 689 O 83.1 68.6 95.7 REMARK 620 5 HOH A 701 O 108.0 85.1 99.9 152.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 405 NE2 REMARK 620 2 HIS A 409 NE2 99.6 REMARK 620 3 HIS A 415 NE2 111.4 95.9 REMARK 620 4 CYS B 1 N 129.0 89.9 117.4 REMARK 620 5 CYS B 1 O 83.1 170.6 91.5 81.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 502 DBREF 3CKI A 219 474 UNP P78536 ADA17_HUMAN 219 474 DBREF 3CKI B 1 121 UNP P35625 TIMP3_HUMAN 24 144 SEQADV 3CKI ALA A 266 UNP P78536 SER 266 ENGINEERED MUTATION SEQADV 3CKI GLN A 452 UNP P78536 ASN 452 ENGINEERED MUTATION SEQRES 1 A 256 ASP PRO MET LYS ASN THR CYS LYS LEU LEU VAL VAL ALA SEQRES 2 A 256 ASP HIS ARG PHE TYR ARG TYR MET GLY ARG GLY GLU GLU SEQRES 3 A 256 SER THR THR THR ASN TYR LEU ILE GLU LEU ILE ASP ARG SEQRES 4 A 256 VAL ASP ASP ILE TYR ARG ASN THR ALA TRP ASP ASN ALA SEQRES 5 A 256 GLY PHE LYS GLY TYR GLY ILE GLN ILE GLU GLN ILE ARG SEQRES 6 A 256 ILE LEU LYS SER PRO GLN GLU VAL LYS PRO GLY GLU LYS SEQRES 7 A 256 HIS TYR ASN MET ALA LYS SER TYR PRO ASN GLU GLU LYS SEQRES 8 A 256 ASP ALA TRP ASP VAL LYS MET LEU LEU GLU GLN PHE SER SEQRES 9 A 256 PHE ASP ILE ALA GLU GLU ALA SER LYS VAL CYS LEU ALA SEQRES 10 A 256 HIS LEU PHE THR TYR GLN ASP PHE ASP MET GLY THR LEU SEQRES 11 A 256 GLY LEU ALA TYR VAL GLY SER PRO ARG ALA ASN SER HIS SEQRES 12 A 256 GLY GLY VAL CYS PRO LYS ALA TYR TYR SER PRO VAL GLY SEQRES 13 A 256 LYS LYS ASN ILE TYR LEU ASN SER GLY LEU THR SER THR SEQRES 14 A 256 LYS ASN TYR GLY LYS THR ILE LEU THR LYS GLU ALA ASP SEQRES 15 A 256 LEU VAL THR THR HIS GLU LEU GLY HIS ASN PHE GLY ALA SEQRES 16 A 256 GLU HIS ASP PRO ASP GLY LEU ALA GLU CYS ALA PRO ASN SEQRES 17 A 256 GLU ASP GLN GLY GLY LYS TYR VAL MET TYR PRO ILE ALA SEQRES 18 A 256 VAL SER GLY ASP HIS GLU ASN ASN LYS MET PHE SER GLN SEQRES 19 A 256 CYS SER LYS GLN SER ILE TYR LYS THR ILE GLU SER LYS SEQRES 20 A 256 ALA GLN GLU CYS PHE GLN GLU ARG SER SEQRES 1 B 121 CYS THR CYS SER PRO SER HIS PRO GLN ASP ALA PHE CYS SEQRES 2 B 121 ASN SER ASP ILE VAL ILE ARG ALA LYS VAL VAL GLY LYS SEQRES 3 B 121 LYS LEU VAL LYS GLU GLY PRO PHE GLY THR LEU VAL TYR SEQRES 4 B 121 THR ILE LYS GLN MET LYS MET TYR ARG GLY PHE THR LYS SEQRES 5 B 121 MET PRO HIS VAL GLN TYR ILE HIS THR GLU ALA SER GLU SEQRES 6 B 121 SER LEU CYS GLY LEU LYS LEU GLU VAL ASN LYS TYR GLN SEQRES 7 B 121 TYR LEU LEU THR GLY ARG VAL TYR ASP GLY LYS MET TYR SEQRES 8 B 121 THR GLY LEU CYS ASN PHE VAL GLU ARG TRP ASP GLN LEU SEQRES 9 B 121 THR LEU SER GLN ARG LYS GLY LEU ASN TYR ARG TYR HIS SEQRES 10 B 121 LEU GLY CYS ASN HET ZN A 501 1 HET NA A 502 1 HETNAM ZN ZINC ION HETNAM NA SODIUM ION FORMUL 3 ZN ZN 2+ FORMUL 4 NA NA 1+ FORMUL 5 HOH *190(H2 O) HELIX 1 1 ASP A 232 MET A 239 1 8 HELIX 2 2 GLU A 243 ASN A 264 1 22 HELIX 3 3 ASP A 313 SER A 330 1 18 HELIX 4 4 PHE A 343 MET A 345 5 3 HELIX 5 5 LEU A 395 PHE A 411 1 17 HELIX 6 6 ASN A 426 GLY A 430 5 5 HELIX 7 7 HIS A 444 MET A 449 5 6 HELIX 8 8 SER A 451 PHE A 470 1 20 HELIX 9 9 HIS B 7 SER B 15 1 9 HELIX 10 10 SER B 64 CYS B 68 5 5 HELIX 11 11 THR B 105 TYR B 114 1 10 SHEET 1 A 6 GLY A 276 ILE A 284 0 SHEET 2 A 6 THR A 224 ALA A 231 1 N ALA A 231 O ARG A 283 SHEET 3 A 6 LEU A 334 THR A 339 1 O PHE A 338 N VAL A 230 SHEET 4 A 6 SER A 382 SER A 386 1 O THR A 385 N THR A 339 SHEET 5 A 6 THR A 347 ALA A 351 -1 N LEU A 348 O SER A 386 SHEET 6 A 6 THR B 2 CYS B 3 -1 O THR B 2 N LEU A 348 SHEET 1 B 2 TYR A 369 SER A 371 0 SHEET 2 B 2 LYS A 376 ILE A 378 -1 O ILE A 378 N TYR A 369 SHEET 1 C 2 LYS A 388 ASN A 389 0 SHEET 2 C 2 LYS A 392 THR A 393 -1 O LYS A 392 N ASN A 389 SHEET 1 D 7 LYS B 22 VAL B 29 0 SHEET 2 D 7 THR B 36 LYS B 42 -1 O THR B 40 N LYS B 26 SHEET 3 D 7 TYR B 58 GLU B 62 -1 O THR B 61 N LEU B 37 SHEET 4 D 7 MET B 90 TYR B 91 1 O MET B 90 N HIS B 60 SHEET 5 D 7 TYR B 79 VAL B 85 -1 N ARG B 84 O TYR B 91 SHEET 6 D 7 ILE B 17 ILE B 19 -1 N ILE B 19 O LEU B 81 SHEET 7 D 7 MET B 46 ARG B 48 -1 O TYR B 47 N VAL B 18 SHEET 1 E 6 LYS B 22 VAL B 29 0 SHEET 2 E 6 THR B 36 LYS B 42 -1 O THR B 40 N LYS B 26 SHEET 3 E 6 TYR B 58 GLU B 62 -1 O THR B 61 N LEU B 37 SHEET 4 E 6 MET B 90 TYR B 91 1 O MET B 90 N HIS B 60 SHEET 5 E 6 TYR B 79 VAL B 85 -1 N ARG B 84 O TYR B 91 SHEET 6 E 6 GLU B 99 ARG B 100 -1 O GLU B 99 N LEU B 80 SSBOND 1 CYS A 225 CYS A 333 1555 1555 2.05 SSBOND 2 CYS A 365 CYS A 469 1555 1555 2.03 SSBOND 3 CYS A 423 CYS A 453 1555 1555 2.04 SSBOND 4 CYS B 1 CYS B 68 1555 1555 2.04 SSBOND 5 CYS B 3 CYS B 95 1555 1555 2.02 SSBOND 6 CYS B 13 CYS B 120 1555 1555 2.04 LINK OD1 ASP A 342 NA NA A 502 1555 1555 2.24 LINK O PHE A 343 NA NA A 502 1555 1555 2.67 LINK OD1 ASN A 389 NA NA A 502 1555 1555 2.19 LINK NE2 HIS A 405 ZN ZN A 501 1555 1555 2.17 LINK NE2 HIS A 409 ZN ZN A 501 1555 1555 2.22 LINK NE2 HIS A 415 ZN ZN A 501 1555 1555 2.20 LINK ZN ZN A 501 N CYS B 1 1555 1555 1.93 LINK ZN ZN A 501 O CYS B 1 1555 1555 2.39 LINK NA NA A 502 O HOH A 689 1555 1555 2.29 LINK NA NA A 502 O HOH A 701 1555 1555 2.45 CISPEP 1 TYR A 304 PRO A 305 0 0.55 SITE 1 AC1 4 HIS A 405 HIS A 409 HIS A 415 CYS B 1 SITE 1 AC2 7 ASP A 342 PHE A 343 GLY A 346 ASN A 389 SITE 2 AC2 7 TYR A 390 HOH A 689 HOH A 701 CRYST1 70.447 70.447 156.728 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014195 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014195 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006380 0.00000