PDB Short entry for 3DJX HEADER HYDROLASE 24-JUN-08 3DJX TITLE BOVINE SEMINAL RIBONUCLEASE- CYTIDINE 5' PHOSPHATE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEMINAL RIBONUCLEASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SEMINAL RNASE, S-RNASE, RIBONUCLEASE BS-1; COMPND 5 EC: 3.1.27.5 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913 KEYWDS RIBONUCLEASE, HYDROLASE, ALLOSTERIC ENZYME, ENDONUCLEASE, NUCLEASE, KEYWDS 2 SECRETED EXPDTA X-RAY DIFFRACTION AUTHOR K.DOSSI,D.D.LEONIDAS,S.E.ZOGRAPHOS,N.G.OIKONOMAKOS REVDAT 4 25-OCT-17 3DJX 1 REMARK REVDAT 3 13-JUL-11 3DJX 1 VERSN REVDAT 2 20-OCT-09 3DJX 1 JRNL REVDAT 1 30-JUN-09 3DJX 0 JRNL AUTH K.DOSSI,V.G.TSIRKONE,J.M.HAYES,J.MATOUSEK,P.POUCKOVA, JRNL AUTH 2 J.SOUCEK,M.ZADINOVA,S.E.ZOGRAPHOS,D.D.LEONIDAS JRNL TITL MAPPING THE RIBONUCLEOLYTIC ACTIVE SITE OF BOVINE SEMINAL JRNL TITL 2 RIBONUCLEASE. THE BINDING OF PYRIMIDINYL PHOSPHONUCLEOTIDE JRNL TITL 3 INHIBITORS JRNL REF EUR.J.MED.CHEM. V. 44 4496 2009 JRNL REFN ISSN 0223-5234 JRNL PMID 19643512 JRNL DOI 10.1016/J.EJMECH.2009.06.039 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 25228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1326 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1706 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1882 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 307 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 16.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.061 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.413 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1972 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2661 ; 1.284 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 246 ; 5.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;37.825 ;24.865 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 365 ;12.498 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.941 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 295 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1420 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 940 ; 0.190 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1347 ; 0.293 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 232 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.157 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.137 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1274 ; 0.685 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2013 ; 1.140 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 777 ; 1.862 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 648 ; 2.907 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 11 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0869 19.5633 23.2512 REMARK 3 T TENSOR REMARK 3 T11: 0.0324 T22: 0.0530 REMARK 3 T33: -0.0004 T12: -0.0214 REMARK 3 T13: -0.0110 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 6.4828 L22: 1.8274 REMARK 3 L33: 9.1638 L12: -0.4176 REMARK 3 L13: -1.0676 L23: 1.1575 REMARK 3 S TENSOR REMARK 3 S11: 0.0796 S12: -0.4102 S13: 0.0757 REMARK 3 S21: 0.2785 S22: -0.0813 S23: -0.0981 REMARK 3 S31: 0.0780 S32: 0.4673 S33: 0.0018 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): 6.9156 22.6248 9.5224 REMARK 3 T TENSOR REMARK 3 T11: 0.0521 T22: 0.0481 REMARK 3 T33: 0.0134 T12: 0.0090 REMARK 3 T13: -0.0094 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 6.1972 L22: 6.9707 REMARK 3 L33: 4.8553 L12: -2.9073 REMARK 3 L13: 2.3211 L23: -5.0435 REMARK 3 S TENSOR REMARK 3 S11: 0.1778 S12: 0.4762 S13: 0.2624 REMARK 3 S21: -0.4547 S22: -0.1693 S23: 0.0383 REMARK 3 S31: 0.2677 S32: 0.0696 S33: -0.0084 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 33 REMARK 3 ORIGIN FOR THE GROUP (A): 18.6649 27.3673 5.5442 REMARK 3 T TENSOR REMARK 3 T11: 0.0043 T22: 0.0185 REMARK 3 T33: 0.0407 T12: -0.0036 REMARK 3 T13: 0.0018 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 4.2087 L22: 2.3685 REMARK 3 L33: 3.6246 L12: 1.3484 REMARK 3 L13: -0.0479 L23: -1.2108 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0879 S13: 0.0281 REMARK 3 S21: -0.2034 S22: 0.0584 S23: 0.2587 REMARK 3 S31: 0.0907 S32: -0.2203 S33: -0.0576 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 39 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8402 32.1517 16.7676 REMARK 3 T TENSOR REMARK 3 T11: 0.0693 T22: 0.1233 REMARK 3 T33: -0.0347 T12: -0.0170 REMARK 3 T13: 0.0203 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 13.0913 L22: 14.0693 REMARK 3 L33: 14.2191 L12: -7.0931 REMARK 3 L13: -6.6838 L23: 14.1338 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.9927 S13: 0.0875 REMARK 3 S21: 1.1964 S22: -0.0782 S23: 0.0005 REMARK 3 S31: 0.2167 S32: -0.0585 S33: 0.0155 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 59 REMARK 3 ORIGIN FOR THE GROUP (A): 34.0825 31.2999 1.6962 REMARK 3 T TENSOR REMARK 3 T11: 0.0494 T22: 0.0170 REMARK 3 T33: 0.0458 T12: -0.0016 REMARK 3 T13: -0.0061 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 3.1194 L22: 1.0691 REMARK 3 L33: 1.1704 L12: 0.4774 REMARK 3 L13: -0.7450 L23: 0.0030 REMARK 3 S TENSOR REMARK 3 S11: 0.0336 S12: 0.0146 S13: -0.0166 REMARK 3 S21: -0.0383 S22: -0.0089 S23: 0.0142 REMARK 3 S31: -0.0322 S32: -0.0311 S33: -0.0247 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 42.9924 43.3913 3.1774 REMARK 3 T TENSOR REMARK 3 T11: 0.0530 T22: -0.0114 REMARK 3 T33: 0.0146 T12: -0.0245 REMARK 3 T13: 0.0083 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.5409 L22: 5.4957 REMARK 3 L33: 6.3974 L12: -0.0243 REMARK 3 L13: -0.6415 L23: 4.4445 REMARK 3 S TENSOR REMARK 3 S11: 0.1397 S12: -0.0063 S13: 0.0237 REMARK 3 S21: -0.1891 S22: 0.0910 S23: -0.1614 REMARK 3 S31: -0.3394 S32: -0.0571 S33: -0.2306 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4585 35.2873 -4.6086 REMARK 3 T TENSOR REMARK 3 T11: 0.0771 T22: 0.0446 REMARK 3 T33: 0.0235 T12: 0.0099 REMARK 3 T13: -0.0071 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 5.1531 L22: 3.0243 REMARK 3 L33: 2.2369 L12: 2.3396 REMARK 3 L13: 0.8043 L23: 0.7488 REMARK 3 S TENSOR REMARK 3 S11: -0.0618 S12: 0.5198 S13: -0.1585 REMARK 3 S21: -0.2375 S22: 0.1862 S23: -0.1396 REMARK 3 S31: 0.0255 S32: 0.1631 S33: -0.1244 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 18.1727 39.4369 6.4562 REMARK 3 T TENSOR REMARK 3 T11: 0.0133 T22: 0.0005 REMARK 3 T33: 0.0905 T12: 0.0257 REMARK 3 T13: 0.0281 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 3.5274 L22: 3.9664 REMARK 3 L33: 8.6895 L12: 0.3059 REMARK 3 L13: -2.7376 L23: -1.7632 REMARK 3 S TENSOR REMARK 3 S11: 0.5019 S12: -0.0605 S13: 0.6684 REMARK 3 S21: 0.2711 S22: -0.0906 S23: 0.1430 REMARK 3 S31: -0.6892 S32: -0.6932 S33: -0.4113 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3267 35.8232 14.5517 REMARK 3 T TENSOR REMARK 3 T11: -0.0258 T22: 0.0936 REMARK 3 T33: 0.0503 T12: -0.0003 REMARK 3 T13: 0.0762 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.7156 L22: 2.2639 REMARK 3 L33: 19.1765 L12: -1.7351 REMARK 3 L13: -2.4921 L23: -2.8250 REMARK 3 S TENSOR REMARK 3 S11: 0.2919 S12: -0.7885 S13: -0.0080 REMARK 3 S21: 0.3345 S22: 0.3930 S23: 0.6199 REMARK 3 S31: -0.1352 S32: -0.5836 S33: -0.6849 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 98 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0939 34.7179 -3.7659 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: -0.0145 REMARK 3 T33: 0.0570 T12: 0.0211 REMARK 3 T13: -0.0294 T23: 0.0344 REMARK 3 L TENSOR REMARK 3 L11: 21.5334 L22: 1.2188 REMARK 3 L33: 25.7071 L12: 5.1156 REMARK 3 L13: -19.4263 L23: -4.4461 REMARK 3 S TENSOR REMARK 3 S11: -0.1704 S12: 0.6104 S13: -0.0530 REMARK 3 S21: -0.1851 S22: 0.1398 S23: 0.2481 REMARK 3 S31: 0.1969 S32: -0.5929 S33: 0.0306 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3472 37.1785 0.4721 REMARK 3 T TENSOR REMARK 3 T11: 0.0417 T22: 0.0233 REMARK 3 T33: 0.0350 T12: -0.0194 REMARK 3 T13: -0.0087 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 5.0420 L22: 1.6843 REMARK 3 L33: 5.8969 L12: -1.8934 REMARK 3 L13: 4.7816 L23: -1.6916 REMARK 3 S TENSOR REMARK 3 S11: -0.1053 S12: 0.2611 S13: 0.0907 REMARK 3 S21: -0.0241 S22: 0.0260 S23: -0.0289 REMARK 3 S31: -0.1980 S32: 0.1619 S33: 0.0793 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 124 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9343 35.4128 5.0675 REMARK 3 T TENSOR REMARK 3 T11: 0.0462 T22: 0.0256 REMARK 3 T33: 0.0594 T12: -0.0271 REMARK 3 T13: -0.0104 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 5.2289 L22: 4.6719 REMARK 3 L33: 3.0472 L12: -4.1254 REMARK 3 L13: 2.8667 L23: -1.6191 REMARK 3 S TENSOR REMARK 3 S11: -0.1375 S12: -0.1416 S13: 0.2166 REMARK 3 S21: -0.0120 S22: 0.1138 S23: -0.1471 REMARK 3 S31: -0.0764 S32: -0.0829 S33: 0.0238 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 14 REMARK 3 ORIGIN FOR THE GROUP (A): 34.8746 28.5582 10.5551 REMARK 3 T TENSOR REMARK 3 T11: 0.0256 T22: 0.0445 REMARK 3 T33: 0.0092 T12: -0.0116 REMARK 3 T13: -0.0021 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 6.4253 L22: 2.5131 REMARK 3 L33: 3.2579 L12: 0.5445 REMARK 3 L13: 1.3180 L23: -0.1408 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.4886 S13: -0.1047 REMARK 3 S21: 0.1884 S22: -0.0784 S23: -0.1099 REMARK 3 S31: -0.1123 S32: -0.0107 S33: 0.1062 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 27 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7197 20.6980 0.6808 REMARK 3 T TENSOR REMARK 3 T11: 0.0340 T22: 0.0343 REMARK 3 T33: 0.0279 T12: -0.0186 REMARK 3 T13: 0.0199 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.9313 L22: 0.8172 REMARK 3 L33: 1.1447 L12: 0.6319 REMARK 3 L13: -1.8076 L23: -0.5327 REMARK 3 S TENSOR REMARK 3 S11: -0.0968 S12: 0.3205 S13: 0.1120 REMARK 3 S21: -0.1641 S22: 0.1165 S23: -0.0078 REMARK 3 S31: -0.0019 S32: -0.1276 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 33 REMARK 3 ORIGIN FOR THE GROUP (A): 18.2891 20.9614 11.8511 REMARK 3 T TENSOR REMARK 3 T11: 0.0003 T22: 0.0463 REMARK 3 T33: 0.0326 T12: -0.0092 REMARK 3 T13: 0.0122 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.7061 L22: 3.9547 REMARK 3 L33: 2.3952 L12: 1.7656 REMARK 3 L13: 0.2725 L23: 0.5650 REMARK 3 S TENSOR REMARK 3 S11: 0.1128 S12: 0.0777 S13: -0.0253 REMARK 3 S21: -0.1110 S22: -0.0346 S23: -0.0709 REMARK 3 S31: -0.0728 S32: 0.0973 S33: -0.0782 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 39 REMARK 3 ORIGIN FOR THE GROUP (A): 22.8318 15.8649 17.7353 REMARK 3 T TENSOR REMARK 3 T11: 0.0076 T22: 0.1424 REMARK 3 T33: 0.0675 T12: -0.0322 REMARK 3 T13: -0.0856 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 20.5434 L22: 14.8991 REMARK 3 L33: 7.8383 L12: -17.4500 REMARK 3 L13: 1.7839 L23: -2.2824 REMARK 3 S TENSOR REMARK 3 S11: 0.1082 S12: -0.6337 S13: -0.0959 REMARK 3 S21: 0.8367 S22: 0.1442 S23: -1.0039 REMARK 3 S31: -0.0407 S32: 0.9486 S33: -0.2524 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 40 B 61 REMARK 3 ORIGIN FOR THE GROUP (A): 3.6519 16.2411 14.5518 REMARK 3 T TENSOR REMARK 3 T11: 0.0533 T22: 0.0356 REMARK 3 T33: 0.0396 T12: 0.0047 REMARK 3 T13: -0.0120 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.0189 L22: 1.2000 REMARK 3 L33: 1.6127 L12: -0.1910 REMARK 3 L13: -0.6396 L23: -0.4131 REMARK 3 S TENSOR REMARK 3 S11: 0.0375 S12: -0.0276 S13: -0.0508 REMARK 3 S21: 0.0325 S22: -0.0104 S23: 0.0136 REMARK 3 S31: 0.0427 S32: -0.0483 S33: -0.0271 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 62 B 68 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6474 2.9437 20.9532 REMARK 3 T TENSOR REMARK 3 T11: 0.0591 T22: 0.0435 REMARK 3 T33: -0.0150 T12: -0.0307 REMARK 3 T13: -0.0118 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 14.8873 L22: 11.0608 REMARK 3 L33: 4.8282 L12: -8.9893 REMARK 3 L13: 8.0923 L23: -6.4416 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: 0.0612 S13: -0.4562 REMARK 3 S21: -0.0708 S22: 0.2005 S23: 0.3537 REMARK 3 S31: 0.1129 S32: 0.0162 S33: -0.2458 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 69 B 77 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8123 8.9881 19.1714 REMARK 3 T TENSOR REMARK 3 T11: 0.0033 T22: 0.0459 REMARK 3 T33: 0.0173 T12: -0.0067 REMARK 3 T13: 0.0019 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 2.1505 L22: 6.4396 REMARK 3 L33: 13.5071 L12: -0.6505 REMARK 3 L13: 2.2531 L23: -6.9746 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: -0.0464 S13: -0.1083 REMARK 3 S21: 0.0360 S22: 0.3250 S23: 0.2979 REMARK 3 S31: 0.0334 S32: -0.4979 S33: -0.3592 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 78 B 86 REMARK 3 ORIGIN FOR THE GROUP (A): 8.5851 12.9531 7.1701 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.0310 REMARK 3 T33: 0.0139 T12: 0.0157 REMARK 3 T13: -0.0034 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 7.7068 L22: 1.8318 REMARK 3 L33: 1.5291 L12: 0.1993 REMARK 3 L13: -0.1154 L23: 0.1732 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: 0.0614 S13: -0.1970 REMARK 3 S21: -0.0667 S22: 0.0043 S23: -0.1122 REMARK 3 S31: 0.1627 S32: 0.0395 S33: -0.0169 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 87 B 95 REMARK 3 ORIGIN FOR THE GROUP (A): 27.9989 10.0473 9.2945 REMARK 3 T TENSOR REMARK 3 T11: -0.0681 T22: 0.2549 REMARK 3 T33: 0.0514 T12: 0.1532 REMARK 3 T13: 0.0629 T23: 0.1087 REMARK 3 L TENSOR REMARK 3 L11: 12.9803 L22: 16.5293 REMARK 3 L33: 35.0339 L12: 3.9273 REMARK 3 L13: 14.7368 L23: 15.5390 REMARK 3 S TENSOR REMARK 3 S11: 0.0804 S12: 1.0311 S13: -0.0486 REMARK 3 S21: -0.3018 S22: -0.0371 S23: -0.6878 REMARK 3 S31: 0.3748 S32: 3.1176 S33: -0.0432 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 96 B 101 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5900 12.7906 3.6568 REMARK 3 T TENSOR REMARK 3 T11: 0.0597 T22: 0.0187 REMARK 3 T33: 0.0289 T12: 0.0277 REMARK 3 T13: 0.0121 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 11.1255 L22: 3.2466 REMARK 3 L33: 4.3837 L12: 4.0877 REMARK 3 L13: -1.4602 L23: 1.8673 REMARK 3 S TENSOR REMARK 3 S11: -0.0910 S12: 0.6785 S13: 0.2306 REMARK 3 S21: -0.1921 S22: 0.0722 S23: 0.0113 REMARK 3 S31: 0.2356 S32: 0.2154 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 102 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 1.2652 11.0545 11.6749 REMARK 3 T TENSOR REMARK 3 T11: 0.0621 T22: 0.0205 REMARK 3 T33: 0.0110 T12: 0.0003 REMARK 3 T13: 0.0046 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.1303 L22: 1.6484 REMARK 3 L33: 8.5600 L12: 0.5352 REMARK 3 L13: 0.4335 L23: -0.8183 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: 0.0992 S13: -0.0433 REMARK 3 S21: -0.1644 S22: 0.0034 S23: 0.0243 REMARK 3 S31: 0.3352 S32: -0.1390 S33: -0.0660 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 124 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5939 13.1464 21.1980 REMARK 3 T TENSOR REMARK 3 T11: 0.0422 T22: 0.0314 REMARK 3 T33: 0.0184 T12: -0.0054 REMARK 3 T13: -0.0045 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.0046 L22: 3.8356 REMARK 3 L33: 8.3925 L12: -0.7729 REMARK 3 L13: -1.2067 L23: 3.7325 REMARK 3 S TENSOR REMARK 3 S11: 0.0704 S12: 0.0078 S13: -0.0582 REMARK 3 S21: 0.0103 S22: 0.0331 S23: 0.0054 REMARK 3 S31: 0.0557 S32: -0.0271 S33: -0.1035 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DJX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000048130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8088 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26554 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 27.775 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 1R5D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG4000, 0.1M SODIUM ACETATE, 0.1M REMARK 280 TRIS/HCL, PH8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.29250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.12350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.50800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.12350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.29250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.50800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 60 -132.79 -100.97 REMARK 500 ASN A 94 77.22 -101.49 REMARK 500 GLN B 60 -142.83 -99.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P A 125 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DJO RELATED DB: PDB REMARK 900 BS-RNASE URIDINE 2' PHOSPHATE COMPLEX REMARK 900 RELATED ID: 3DJP RELATED DB: PDB REMARK 900 BS-RNASE URIDINE 3' PHOSPHATE COMPLEX REMARK 900 RELATED ID: 3DJQ RELATED DB: PDB REMARK 900 BS-RNASE URIDINE 5' DIPHOSPHATE COMPLEX REMARK 900 RELATED ID: 3DJV RELATED DB: PDB REMARK 900 BS-RNASE CYTIDINE 3' PHOSPHATE COMPLEX DBREF 3DJX A 1 124 UNP P00669 RNS_BOVIN 27 150 DBREF 3DJX B 1 124 UNP P00669 RNS_BOVIN 27 150 SEQRES 1 A 124 LYS GLU SER ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 A 124 ASP SER GLY ASN SER PRO SER SER SER SER ASN TYR CYS SEQRES 3 A 124 ASN LEU MET MET CYS CYS ARG LYS MET THR GLN GLY LYS SEQRES 4 A 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 A 124 ASP VAL LYS ALA VAL CYS SER GLN LYS LYS VAL THR CYS SEQRES 6 A 124 LYS ASN GLY GLN THR ASN CYS TYR GLN SER LYS SER THR SEQRES 7 A 124 MET ARG ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 A 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN VAL GLU LYS SEQRES 9 A 124 HIS ILE ILE VAL ALA CYS GLY GLY LYS PRO SER VAL PRO SEQRES 10 A 124 VAL HIS PHE ASP ALA SER VAL SEQRES 1 B 124 LYS GLU SER ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 B 124 ASP SER GLY ASN SER PRO SER SER SER SER ASN TYR CYS SEQRES 3 B 124 ASN LEU MET MET CYS CYS ARG LYS MET THR GLN GLY LYS SEQRES 4 B 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 B 124 ASP VAL LYS ALA VAL CYS SER GLN LYS LYS VAL THR CYS SEQRES 6 B 124 LYS ASN GLY GLN THR ASN CYS TYR GLN SER LYS SER THR SEQRES 7 B 124 MET ARG ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 B 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN VAL GLU LYS SEQRES 9 B 124 HIS ILE ILE VAL ALA CYS GLY GLY LYS PRO SER VAL PRO SEQRES 10 B 124 VAL HIS PHE ASP ALA SER VAL HET C5P A 125 21 HET C5P B 201 21 HETNAM C5P CYTIDINE-5'-MONOPHOSPHATE FORMUL 3 C5P 2(C9 H14 N3 O8 P) FORMUL 5 HOH *307(H2 O) HELIX 1 1 SER A 3 MET A 13 1 11 HELIX 2 2 SER A 21 SER A 23 5 3 HELIX 3 3 ASN A 24 ARG A 33 1 10 HELIX 4 4 SER A 50 VAL A 57 1 8 HELIX 5 5 CYS A 58 GLN A 60 5 3 HELIX 6 6 SER B 3 MET B 13 1 11 HELIX 7 7 ASN B 24 ARG B 33 1 10 HELIX 8 8 SER B 50 VAL B 57 1 8 HELIX 9 9 CYS B 58 GLN B 60 5 3 SHEET 1 A 5 VAL A 43 VAL A 47 0 SHEET 2 A 5 MET A 79 GLU A 86 -1 O THR A 82 N PHE A 46 SHEET 3 A 5 TYR A 97 GLY A 111 -1 O LYS A 98 N ARG A 85 SHEET 4 A 5 CYS A 72 GLN A 74 -1 N TYR A 73 O VAL A 108 SHEET 5 A 5 LYS A 61 VAL A 63 -1 N LYS A 61 O GLN A 74 SHEET 1 B 4 VAL A 43 VAL A 47 0 SHEET 2 B 4 MET A 79 GLU A 86 -1 O THR A 82 N PHE A 46 SHEET 3 B 4 TYR A 97 GLY A 111 -1 O LYS A 98 N ARG A 85 SHEET 4 B 4 VAL A 116 VAL A 124 -1 O VAL A 118 N ALA A 109 SHEET 1 C 5 VAL B 43 VAL B 47 0 SHEET 2 C 5 MET B 79 GLU B 86 -1 O THR B 82 N PHE B 46 SHEET 3 C 5 TYR B 97 GLY B 111 -1 O LYS B 98 N ARG B 85 SHEET 4 C 5 CYS B 72 GLN B 74 -1 N TYR B 73 O VAL B 108 SHEET 5 C 5 LYS B 61 VAL B 63 -1 N LYS B 61 O GLN B 74 SHEET 1 D 4 VAL B 43 VAL B 47 0 SHEET 2 D 4 MET B 79 GLU B 86 -1 O THR B 82 N PHE B 46 SHEET 3 D 4 TYR B 97 GLY B 111 -1 O LYS B 98 N ARG B 85 SHEET 4 D 4 VAL B 116 VAL B 124 -1 O VAL B 118 N ALA B 109 SSBOND 1 CYS A 26 CYS A 84 1555 1555 2.04 SSBOND 2 CYS A 31 CYS B 32 1555 1555 2.03 SSBOND 3 CYS A 32 CYS B 31 1555 1555 2.04 SSBOND 4 CYS A 40 CYS A 95 1555 1555 2.03 SSBOND 5 CYS A 58 CYS A 110 1555 1555 2.03 SSBOND 6 CYS A 65 CYS A 72 1555 1555 2.02 SSBOND 7 CYS B 26 CYS B 84 1555 1555 2.04 SSBOND 8 CYS B 40 CYS B 95 1555 1555 2.03 SSBOND 9 CYS B 58 CYS B 110 1555 1555 2.02 SSBOND 10 CYS B 65 CYS B 72 1555 1555 2.03 CISPEP 1 TYR A 92 PRO A 93 0 4.96 CISPEP 2 LYS A 113 PRO A 114 0 0.05 CISPEP 3 TYR B 92 PRO B 93 0 6.31 CISPEP 4 LYS B 113 PRO B 114 0 7.51 SITE 1 AC1 17 LYS A 1 LYS A 41 VAL A 43 ASN A 44 SITE 2 AC1 17 THR A 45 HIS A 119 PHE A 120 HOH A 129 SITE 3 AC1 17 HOH A 166 HOH A 188 HOH A 220 HOH A 260 SITE 4 AC1 17 HOH A 263 HOH A 269 HIS B 12 HOH B 222 SITE 5 AC1 17 HOH B 338 SITE 1 AC2 12 HIS A 12 LYS B 1 LYS B 41 VAL B 43 SITE 2 AC2 12 ASN B 44 THR B 45 HIS B 119 PHE B 120 SITE 3 AC2 12 HOH B 221 HOH B 226 HOH B 284 HOH B 376 CRYST1 48.585 59.016 82.247 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020582 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016945 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012158 0.00000