PDB Short entry for 3F6W HEADER DNA BINDING PROTEIN 06-NOV-08 3F6W TITLE XRE-FAMILY LIKE PROTEIN FROM PSEUDOMONAS SYRINGAE PV. TOMATO STR. TITLE 2 DC3000 COMPND MOL_ID: 1; COMPND 2 MOLECULE: XRE-FAMILY LIKE PROTEIN; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: DNA-BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SYRINGAE PV. TOMATO; SOURCE 3 ORGANISM_TAXID: 223283; SOURCE 4 STRAIN: DC3000; SOURCE 5 GENE: PSPTO0717, PSPTO_0717; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS HELIX-TURN-HELIX; DNA BINDING PROTEIN; XENOBIOTIC RESPONSE ELEMENT KEYWDS 2 FAMILY OF TRANSCRIPTIONAL REGULATORS, STRUCTURAL GENOMICS, PSI-2, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 4 GENOMICS, MCSG, DNA-BINDING, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.PETROVA,M.CUFF,G.SHACKLEFORD,M.GU,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 5 27-DEC-23 3F6W 1 REMARK LINK REVDAT 4 25-OCT-17 3F6W 1 REMARK REVDAT 3 13-JUL-11 3F6W 1 VERSN REVDAT 2 18-AUG-09 3F6W 1 AUTHOR REVDAT 1 02-DEC-08 3F6W 0 JRNL AUTH T.PETROVA,M.CUFF,G.SHACKLEFORD,M.GU,A.JOACHIMIAK JRNL TITL XRE-FAMILY LIKE PROTEIN FROM PSEUDOMONAS SYRINGAE PV. TOMATO JRNL TITL 2 STR. DC3000 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 78813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6715 - 5.6156 0.99 2691 138 0.2071 0.2293 REMARK 3 2 5.6156 - 4.4586 1.00 2652 175 0.1568 0.2106 REMARK 3 3 4.4586 - 3.8953 1.00 2663 169 0.1529 0.2426 REMARK 3 4 3.8953 - 3.5394 1.00 2720 140 0.1584 0.1894 REMARK 3 5 3.5394 - 3.2858 1.00 2698 116 0.1665 0.2169 REMARK 3 6 3.2858 - 3.0921 1.00 2697 144 0.1920 0.2474 REMARK 3 7 3.0921 - 2.9373 1.00 2709 140 0.2001 0.2465 REMARK 3 8 2.9373 - 2.8094 1.00 2680 135 0.2136 0.2603 REMARK 3 9 2.8094 - 2.7013 1.00 2633 151 0.2194 0.2908 REMARK 3 10 2.7013 - 2.6081 1.00 2770 132 0.2071 0.2655 REMARK 3 11 2.6081 - 2.5265 1.00 2660 131 0.1921 0.2732 REMARK 3 12 2.5265 - 2.4543 1.00 2658 155 0.1910 0.2663 REMARK 3 13 2.4543 - 2.3897 0.99 2695 150 0.1812 0.2283 REMARK 3 14 2.3897 - 2.3314 0.99 2654 128 0.1783 0.2459 REMARK 3 15 2.3314 - 2.2784 0.99 2723 148 0.1677 0.2224 REMARK 3 16 2.2784 - 2.2299 0.99 2641 137 0.1843 0.2482 REMARK 3 17 2.2299 - 2.1853 0.99 2695 134 0.1865 0.3004 REMARK 3 18 2.1853 - 2.1441 0.99 2656 159 0.2012 0.2785 REMARK 3 19 2.1441 - 2.1058 0.99 2647 144 0.2046 0.2376 REMARK 3 20 2.1058 - 2.0701 0.99 2730 138 0.1990 0.2609 REMARK 3 21 2.0701 - 2.0367 0.99 2647 121 0.1983 0.2363 REMARK 3 22 2.0367 - 2.0054 0.99 2672 116 0.2189 0.2903 REMARK 3 23 2.0054 - 1.9759 0.99 2703 160 0.2126 0.2675 REMARK 3 24 1.9759 - 1.9481 0.99 2657 137 0.2129 0.2873 REMARK 3 25 1.9481 - 1.9217 0.99 2615 157 0.2120 0.2923 REMARK 3 26 1.9217 - 1.8968 0.98 2619 126 0.2170 0.2754 REMARK 3 27 1.8968 - 1.8731 0.99 2729 135 0.2339 0.3220 REMARK 3 28 1.8731 - 1.8505 0.95 2555 128 0.2546 0.3094 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 80.92 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3F6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050221. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935, 0.97948 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78813 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 44.659 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE DM, SOLVE, RESOLVE, CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3M SODIUM CHLORIDE, 1M BIS-TRIS, PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.09800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.15300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.09800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.15300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: UNKNOWN. LIKELY TO BE A DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -15.50722 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 110.33963 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 45.09800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 24.15300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 116 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 513 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 618 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 80 REMARK 465 SER B -2 REMARK 465 SER C -2 REMARK 465 SER D 80 REMARK 465 SER E -2 REMARK 465 ASN E -1 REMARK 465 SER E 80 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS E 2 CG CD CE NZ REMARK 470 GLU E 18 CB CG CD OE1 OE2 REMARK 470 GLN E 38 CB CG CD OE1 NE2 REMARK 470 LYS E 43 CB CG CD CE NZ REMARK 470 GLU E 48 CB CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 48 OE2 REMARK 480 ILE D 25 CG2 REMARK 480 ILE D 63 CD1 REMARK 480 ALA E 0 CB REMARK 480 LEU E 15 CG CD1 CD2 REMARK 480 SER E 21 OG REMARK 480 PRO E 37 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 78 61.60 -114.61 REMARK 500 PRO E 37 -177.28 -45.80 REMARK 500 ALA E 47 19.25 54.58 REMARK 500 THR E 78 76.66 -151.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB A 81 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2B5A RELATED DB: PDB REMARK 900 RELATED ID: 3EF8 RELATED DB: PDB REMARK 900 RELATED ID: 1Y7Y RELATED DB: PDB REMARK 900 RELATED ID: APC88786 RELATED DB: TARGETDB DBREF 3F6W A 2 80 UNP Q889N2 Q889N2_PSESM 2 80 DBREF 3F6W B 2 80 UNP Q889N2 Q889N2_PSESM 2 80 DBREF 3F6W C 2 80 UNP Q889N2 Q889N2_PSESM 2 80 DBREF 3F6W D 2 80 UNP Q889N2 Q889N2_PSESM 2 80 DBREF 3F6W E 2 80 UNP Q889N2 Q889N2_PSESM 2 80 SEQADV 3F6W SER A -2 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ASN A -1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ALA A 0 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W THR A 1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W SER B -2 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ASN B -1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ALA B 0 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W THR B 1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W SER C -2 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ASN C -1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ALA C 0 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W THR C 1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W SER D -2 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ASN D -1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ALA D 0 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W THR D 1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W SER E -2 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ASN E -1 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W ALA E 0 UNP Q889N2 EXPRESSION TAG SEQADV 3F6W THR E 1 UNP Q889N2 EXPRESSION TAG SEQRES 1 A 83 SER ASN ALA THR LYS THR ILE HIS ASN ALA ARG TYR GLN SEQRES 2 A 83 ALA LEU LEU ASP LEU LEU LEU GLU ALA ARG SER ALA ALA SEQRES 3 A 83 GLY ILE THR GLN LYS GLU LEU ALA ALA ARG LEU GLY ARG SEQRES 4 A 83 PRO GLN SER PHE VAL SER LYS THR GLU ASN ALA GLU ARG SEQRES 5 A 83 ARG LEU ASP VAL ILE GLU PHE MSE ASP PHE CYS ARG GLY SEQRES 6 A 83 ILE GLY THR ASP PRO TYR ALA LEU LEU SER LYS LEU GLU SEQRES 7 A 83 ALA MSE THR PRO SER SEQRES 1 B 83 SER ASN ALA THR LYS THR ILE HIS ASN ALA ARG TYR GLN SEQRES 2 B 83 ALA LEU LEU ASP LEU LEU LEU GLU ALA ARG SER ALA ALA SEQRES 3 B 83 GLY ILE THR GLN LYS GLU LEU ALA ALA ARG LEU GLY ARG SEQRES 4 B 83 PRO GLN SER PHE VAL SER LYS THR GLU ASN ALA GLU ARG SEQRES 5 B 83 ARG LEU ASP VAL ILE GLU PHE MSE ASP PHE CYS ARG GLY SEQRES 6 B 83 ILE GLY THR ASP PRO TYR ALA LEU LEU SER LYS LEU GLU SEQRES 7 B 83 ALA MSE THR PRO SER SEQRES 1 C 83 SER ASN ALA THR LYS THR ILE HIS ASN ALA ARG TYR GLN SEQRES 2 C 83 ALA LEU LEU ASP LEU LEU LEU GLU ALA ARG SER ALA ALA SEQRES 3 C 83 GLY ILE THR GLN LYS GLU LEU ALA ALA ARG LEU GLY ARG SEQRES 4 C 83 PRO GLN SER PHE VAL SER LYS THR GLU ASN ALA GLU ARG SEQRES 5 C 83 ARG LEU ASP VAL ILE GLU PHE MSE ASP PHE CYS ARG GLY SEQRES 6 C 83 ILE GLY THR ASP PRO TYR ALA LEU LEU SER LYS LEU GLU SEQRES 7 C 83 ALA MSE THR PRO SER SEQRES 1 D 83 SER ASN ALA THR LYS THR ILE HIS ASN ALA ARG TYR GLN SEQRES 2 D 83 ALA LEU LEU ASP LEU LEU LEU GLU ALA ARG SER ALA ALA SEQRES 3 D 83 GLY ILE THR GLN LYS GLU LEU ALA ALA ARG LEU GLY ARG SEQRES 4 D 83 PRO GLN SER PHE VAL SER LYS THR GLU ASN ALA GLU ARG SEQRES 5 D 83 ARG LEU ASP VAL ILE GLU PHE MSE ASP PHE CYS ARG GLY SEQRES 6 D 83 ILE GLY THR ASP PRO TYR ALA LEU LEU SER LYS LEU GLU SEQRES 7 D 83 ALA MSE THR PRO SER SEQRES 1 E 83 SER ASN ALA THR LYS THR ILE HIS ASN ALA ARG TYR GLN SEQRES 2 E 83 ALA LEU LEU ASP LEU LEU LEU GLU ALA ARG SER ALA ALA SEQRES 3 E 83 GLY ILE THR GLN LYS GLU LEU ALA ALA ARG LEU GLY ARG SEQRES 4 E 83 PRO GLN SER PHE VAL SER LYS THR GLU ASN ALA GLU ARG SEQRES 5 E 83 ARG LEU ASP VAL ILE GLU PHE MSE ASP PHE CYS ARG GLY SEQRES 6 E 83 ILE GLY THR ASP PRO TYR ALA LEU LEU SER LYS LEU GLU SEQRES 7 E 83 ALA MSE THR PRO SER MODRES 3F6W MSE A 57 MET SELENOMETHIONINE MODRES 3F6W MSE A 77 MET SELENOMETHIONINE MODRES 3F6W MSE B 57 MET SELENOMETHIONINE MODRES 3F6W MSE B 77 MET SELENOMETHIONINE MODRES 3F6W MSE C 57 MET SELENOMETHIONINE MODRES 3F6W MSE C 77 MET SELENOMETHIONINE MODRES 3F6W MSE D 57 MET SELENOMETHIONINE MODRES 3F6W MSE D 77 MET SELENOMETHIONINE MODRES 3F6W MSE E 57 MET SELENOMETHIONINE MODRES 3F6W MSE E 77 MET SELENOMETHIONINE HET MSE A 57 8 HET MSE A 77 8 HET MSE B 57 8 HET MSE B 77 16 HET MSE C 57 8 HET MSE C 77 16 HET MSE D 57 8 HET MSE D 77 8 HET MSE E 57 8 HET MSE E 77 16 HET BTB A 81 14 HETNAM MSE SELENOMETHIONINE HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 6 BTB C8 H19 N O5 FORMUL 7 HOH *587(H2 O) HELIX 1 1 ASN A -1 GLY A 24 1 26 HELIX 2 2 THR A 26 GLY A 35 1 10 HELIX 3 3 PRO A 37 ASN A 46 1 10 HELIX 4 4 ASP A 52 GLY A 64 1 13 HELIX 5 5 ASP A 66 ALA A 76 1 11 HELIX 6 6 ASN B -1 GLY B 24 1 26 HELIX 7 7 THR B 26 GLY B 35 1 10 HELIX 8 8 PRO B 37 ASN B 46 1 10 HELIX 9 9 ASP B 52 GLY B 64 1 13 HELIX 10 10 ASP B 66 MSE B 77 1 12 HELIX 11 11 ASN C -1 GLY C 24 1 26 HELIX 12 12 THR C 26 GLY C 35 1 10 HELIX 13 13 PRO C 37 ASN C 46 1 10 HELIX 14 14 ASP C 52 GLY C 64 1 13 HELIX 15 15 ASP C 66 MSE C 77 1 12 HELIX 16 16 ASN D -1 GLY D 24 1 26 HELIX 17 17 THR D 26 GLY D 35 1 10 HELIX 18 18 PRO D 37 ASN D 46 1 10 HELIX 19 19 ASP D 52 ILE D 63 1 12 HELIX 20 20 ASP D 66 ALA D 76 1 11 HELIX 21 21 ALA E 0 GLY E 24 1 25 HELIX 22 22 THR E 26 GLY E 35 1 10 HELIX 23 23 PRO E 37 ASN E 46 1 10 HELIX 24 24 ASP E 52 GLY E 62 1 11 HELIX 25 25 ASP E 66 ALA E 76 1 11 LINK C PHE A 56 N MSE A 57 1555 1555 1.33 LINK C MSE A 57 N ASP A 58 1555 1555 1.34 LINK C ALA A 76 N MSE A 77 1555 1555 1.33 LINK C MSE A 77 N THR A 78 1555 1555 1.33 LINK C PHE B 56 N MSE B 57 1555 1555 1.33 LINK C MSE B 57 N ASP B 58 1555 1555 1.33 LINK C AALA B 76 N AMSE B 77 1555 1555 1.33 LINK C BALA B 76 N BMSE B 77 1555 1555 1.33 LINK C AMSE B 77 N ATHR B 78 1555 1555 1.33 LINK C BMSE B 77 N BTHR B 78 1555 1555 1.33 LINK C PHE C 56 N MSE C 57 1555 1555 1.33 LINK C MSE C 57 N ASP C 58 1555 1555 1.33 LINK C AALA C 76 N AMSE C 77 1555 1555 1.33 LINK C BALA C 76 N BMSE C 77 1555 1555 1.33 LINK C AMSE C 77 N ATHR C 78 1555 1555 1.33 LINK C BMSE C 77 N BTHR C 78 1555 1555 1.33 LINK C PHE D 56 N MSE D 57 1555 1555 1.33 LINK C MSE D 57 N ASP D 58 1555 1555 1.33 LINK C ALA D 76 N MSE D 77 1555 1555 1.33 LINK C MSE D 77 N THR D 78 1555 1555 1.33 LINK C PHE E 56 N MSE E 57 1555 1555 1.33 LINK C MSE E 57 N ASP E 58 1555 1555 1.33 LINK C AALA E 76 N AMSE E 77 1555 1555 1.33 LINK C BALA E 76 N BMSE E 77 1555 1555 1.33 LINK C AMSE E 77 N ATHR E 78 1555 1555 1.33 LINK C BMSE E 77 N BTHR E 78 1555 1555 1.33 SITE 1 AC1 8 ASN A -1 SER A -2 ASP A 14 GLU A 18 SITE 2 AC1 8 HOH A 103 HOH A 616 ARG C 49 ARG D 50 CRYST1 90.196 48.306 111.424 90.00 98.00 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011087 0.000000 0.001559 0.00000 SCALE2 0.000000 0.020701 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009063 0.00000