PDB Short entry for 3FE3 HEADER TRANSFERASE 27-NOV-08 3FE3 TITLE CRYSTAL STRUCTURE OF THE KINASE MARK3/PAR-1: T211A-S215A DOUBLE MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAP/MICROTUBULE AFFINITY-REGULATING KINASE 3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC AND UBIQUITIN-ASSOCIATED DOMAINS, UNP RESIDUES COMPND 5 41-367; COMPND 6 SYNONYM: CDC25C-ASSOCIATED PROTEIN KINASE 1, C-TAK1, CTAK1, COMPND 7 SERINE/THREONINE PROTEIN KINASE P78, SER/THR PROTEIN KINASE PAR-1, COMPND 8 PROTEIN KINASE STK10; COMPND 9 EC: 2.7.11.1; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MARK3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET16B KEYWDS SERINE/THREONINE PROTEIN KINASE; MARK;PAR-1; KIN1; UBA DOMAIN;C- KEYWDS 2 TAK1;P78;MARK3, ATP-BINDING, KINASE, NUCLEOTIDE-BINDING, KEYWDS 3 PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.NUGOOR,A.MARX,S.PANNEERSELVAM,E.-M.MANDELKOW,E.MANDELKOW REVDAT 4 01-NOV-23 3FE3 1 REMARK REVDAT 3 10-NOV-21 3FE3 1 SEQADV REVDAT 2 13-JUL-11 3FE3 1 VERSN REVDAT 1 16-DEC-08 3FE3 0 JRNL AUTH C.NUGOOR,A.MARX,S.PANNEERSELVAM,E.-M.MANDELKOW,E.MANDELKOW JRNL TITL CRYSTAL STRUCTURE OF THE KINASE MARK3/PAR-1: T211A-S215A JRNL TITL 2 DOUBLE MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.PANNEERSELVAM,A.MARX,E.-M.MANDELKOW,E.MANDELKOW REMARK 1 TITL STRUCTURE OF THE CATALYTIC AND UBIQUITIN-ASSOCIATED DOMAINS REMARK 1 TITL 2 OF THE PROTEIN KINASE MARK/PAR-1 REMARK 1 REF STRUCTURE V. 14 173 2006 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 16472737 REMARK 1 DOI 10.1016/J.STR.2005.09.022 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.MARX,C.NUGOOR,J.MULLER,S.PANNEERSELVAM,T.TIMM,M.BILANG, REMARK 1 AUTH 2 E.MYLONAS,D.I.SVERGUN,E.-M.MANDELKOW,E.MANDELKOW REMARK 1 TITL STRUCTURAL VARIATIONS IN THE CATALYTIC AND REMARK 1 TITL 2 UBIQUITIN-ASSOCIATED DOMAINS OF MICROTUBULE-ASSOCIATED REMARK 1 TITL 3 PROTEIN/MICROTUBULE AFFINITY REGULATING KINASE (MARK) 1 AND REMARK 1 TITL 4 MARK2 REMARK 1 REF J.BIOL.CHEM. V. 281 27586 2006 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 16803889 REMARK 1 DOI 10.1074/JBC.M604865200 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.4.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 75930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3856 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5319 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE SET COUNT : 265 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5136 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 398 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.48000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.944 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5306 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7146 ; 1.912 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 648 ; 5.489 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 250 ;31.159 ;23.760 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1034 ;16.747 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;18.745 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 782 ; 0.147 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3950 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3181 ; 1.268 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5149 ; 2.098 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2125 ; 3.252 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1992 ; 5.110 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 55 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): -16.8880 -28.5900 -44.4750 REMARK 3 T TENSOR REMARK 3 T11: 0.0878 T22: 0.1067 REMARK 3 T33: -0.1069 T12: -0.0891 REMARK 3 T13: 0.0270 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 3.5550 L22: 3.2549 REMARK 3 L33: 4.5192 L12: 0.2576 REMARK 3 L13: 2.4151 L23: 1.8211 REMARK 3 S TENSOR REMARK 3 S11: -0.3328 S12: 0.2929 S13: 0.3407 REMARK 3 S21: -0.4148 S22: 0.3295 S23: -0.2351 REMARK 3 S31: -0.3753 S32: 0.1952 S33: 0.0032 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 137 A 316 REMARK 3 ORIGIN FOR THE GROUP (A): -8.1510 -28.6330 -19.2050 REMARK 3 T TENSOR REMARK 3 T11: 0.0054 T22: 0.0386 REMARK 3 T33: -0.1314 T12: 0.0624 REMARK 3 T13: -0.0170 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.2264 L22: 1.1773 REMARK 3 L33: 2.0206 L12: 0.4423 REMARK 3 L13: 0.6171 L23: 0.3417 REMARK 3 S TENSOR REMARK 3 S11: 0.1305 S12: 0.0068 S13: -0.1446 REMARK 3 S21: 0.0076 S22: -0.0360 S23: -0.0087 REMARK 3 S31: 0.2923 S32: -0.1363 S33: -0.0946 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 331 A 364 REMARK 3 ORIGIN FOR THE GROUP (A): -19.9790 -46.4770 -50.2670 REMARK 3 T TENSOR REMARK 3 T11: 0.1987 T22: 0.1334 REMARK 3 T33: 0.0279 T12: -0.0484 REMARK 3 T13: -0.0212 T23: -0.1745 REMARK 3 L TENSOR REMARK 3 L11: 5.9599 L22: 3.6738 REMARK 3 L33: 8.5459 L12: 3.2665 REMARK 3 L13: -1.8165 L23: 1.1066 REMARK 3 S TENSOR REMARK 3 S11: -0.0850 S12: 0.4979 S13: -1.0047 REMARK 3 S21: 0.0955 S22: 0.5507 S23: -0.6198 REMARK 3 S31: 1.2637 S32: 0.1803 S33: -0.4658 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 55 B 132 REMARK 3 ORIGIN FOR THE GROUP (A): -22.9270 6.4390 -11.9070 REMARK 3 T TENSOR REMARK 3 T11: -0.0664 T22: -0.0375 REMARK 3 T33: -0.0770 T12: 0.0933 REMARK 3 T13: 0.0386 T23: 0.0784 REMARK 3 L TENSOR REMARK 3 L11: 6.5472 L22: 1.5948 REMARK 3 L33: 1.9951 L12: -1.4806 REMARK 3 L13: -0.6867 L23: 0.7025 REMARK 3 S TENSOR REMARK 3 S11: -0.2046 S12: -0.6521 S13: -0.7700 REMARK 3 S21: 0.1605 S22: 0.1265 S23: 0.1418 REMARK 3 S31: 0.0826 S32: 0.1077 S33: 0.0780 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 137 B 316 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2690 4.0000 -27.1830 REMARK 3 T TENSOR REMARK 3 T11: -0.0862 T22: 0.0604 REMARK 3 T33: -0.1388 T12: -0.0160 REMARK 3 T13: 0.0315 T23: 0.0519 REMARK 3 L TENSOR REMARK 3 L11: 2.3627 L22: 1.7352 REMARK 3 L33: 2.4021 L12: -0.9374 REMARK 3 L13: -0.1569 L23: -0.1194 REMARK 3 S TENSOR REMARK 3 S11: 0.0661 S12: 0.0691 S13: 0.2159 REMARK 3 S21: -0.0958 S22: -0.0638 S23: -0.1359 REMARK 3 S31: -0.0970 S32: 0.3886 S33: -0.0024 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 331 B 364 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7510 24.2400 -4.9250 REMARK 3 T TENSOR REMARK 3 T11: -0.0534 T22: 0.0655 REMARK 3 T33: -0.1094 T12: 0.0139 REMARK 3 T13: 0.0378 T23: -0.1403 REMARK 3 L TENSOR REMARK 3 L11: 4.4283 L22: 4.4888 REMARK 3 L33: 6.8293 L12: -1.4106 REMARK 3 L13: -0.8507 L23: 1.3167 REMARK 3 S TENSOR REMARK 3 S11: 0.1131 S12: -0.9474 S13: 0.7041 REMARK 3 S21: 0.1189 S22: 0.0054 S23: -0.4193 REMARK 3 S31: -0.4353 S32: 0.5318 S33: -0.1184 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3FE3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75983 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 62.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.950 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.71 REMARK 200 R MERGE FOR SHELL (I) : 0.40500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2HAK-E (52-304) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 200MM CALCIUM CHLORIDE, REMARK 280 15-18% PEG 3350, 5MM DTT , PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 48.26000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.66500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 48.26000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.66500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHOR DETERMINED BIOLOGICAL UNIT: UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 40 REMARK 465 ASN A 41 REMARK 465 SER A 42 REMARK 465 ILE A 43 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 CYS A 46 REMARK 465 ALA A 47 REMARK 465 ASP A 48 REMARK 465 GLU A 49 REMARK 465 LYS A 367 REMARK 465 GLY B 40 REMARK 465 ASN B 41 REMARK 465 SER B 42 REMARK 465 ILE B 43 REMARK 465 ALA B 44 REMARK 465 SER B 45 REMARK 465 CYS B 46 REMARK 465 ALA B 47 REMARK 465 ASP B 48 REMARK 465 GLU B 49 REMARK 465 LYS B 367 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG LYS B 227 O HOH B 397 2.11 REMARK 500 O HOH A 395 O HOH B 652 2.12 REMARK 500 O GLY B 226 O HOH B 659 2.15 REMARK 500 O HOH B 418 O HOH B 651 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 213 CB CYS A 213 SG -0.201 REMARK 500 CYS B 213 CB CYS B 213 SG 0.132 REMARK 500 GLU B 356 CB GLU B 356 CG -0.123 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 262 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 PRO B 51 C - N - CA ANGL. DEV. = -12.1 DEGREES REMARK 500 ARG B 149 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 59 -140.85 -105.44 REMARK 500 ASP A 178 29.87 -153.38 REMARK 500 GLU A 312 -59.80 -25.80 REMARK 500 ASP A 314 39.99 -162.65 REMARK 500 MET A 352 70.17 39.66 REMARK 500 ASP A 355 -163.17 -114.25 REMARK 500 ASN B 55 30.42 -91.43 REMARK 500 LEU B 59 -129.60 -120.13 REMARK 500 ASP B 178 29.76 -157.42 REMARK 500 LYS B 227 -147.45 -109.77 REMARK 500 TYR B 229 71.76 -152.88 REMARK 500 ASP B 230 -6.44 -150.04 REMARK 500 ASP B 314 46.88 -147.36 REMARK 500 ASP B 355 -166.00 -115.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HAK RELATED DB: PDB REMARK 900 RELATED ID: 2QNJ RELATED DB: PDB REMARK 900 RELATED ID: 2Y8G RELATED DB: PDB REMARK 900 RELATED ID: 2ZMU RELATED DB: PDB REMARK 900 RELATED ID: 2ZMV RELATED DB: PDB REMARK 900 RELATED ID: 2ZMW RELATED DB: PDB REMARK 900 RELATED ID: 2R0I RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE IS BASED ON THE ISOFORM 3 OF DATABASE MARK3_HUMAN. REMARK 999 RESIDUES UNP 162-184 ARE MISSING IN ISOFORM 3. DBREF 3FE3 A 41 367 UNP P27448 MARK3_HUMAN 41 367 DBREF 3FE3 B 41 367 UNP P27448 MARK3_HUMAN 41 367 SEQADV 3FE3 GLY A 40 UNP P27448 EXPRESSION TAG SEQADV 3FE3 ALA A 211 UNP P27448 THR 211 ENGINEERED MUTATION SEQADV 3FE3 ALA A 215 UNP P27448 SER 215 ENGINEERED MUTATION SEQADV 3FE3 GLY B 40 UNP P27448 EXPRESSION TAG SEQADV 3FE3 ALA B 211 UNP P27448 THR 211 ENGINEERED MUTATION SEQADV 3FE3 ALA B 215 UNP P27448 SER 215 ENGINEERED MUTATION SEQRES 1 A 328 GLY ASN SER ILE ALA SER CYS ALA ASP GLU GLN PRO HIS SEQRES 2 A 328 ILE GLY ASN TYR ARG LEU LEU LYS THR ILE GLY LYS GLY SEQRES 3 A 328 ASN PHE ALA LYS VAL LYS LEU ALA ARG HIS ILE LEU THR SEQRES 4 A 328 GLY ARG GLU VAL ALA ILE LYS ILE ILE ASP LYS THR GLN SEQRES 5 A 328 LEU ASN PRO THR SER LEU GLN LYS LEU PHE ARG GLU VAL SEQRES 6 A 328 ARG ILE MET LYS ILE LEU ASN HIS PRO ASN ILE VAL LYS SEQRES 7 A 328 LEU PHE GLU VAL ILE GLU THR GLU LYS THR LEU TYR LEU SEQRES 8 A 328 ILE MET GLU TYR ALA SER GLY GLY GLU VAL PHE ASP TYR SEQRES 9 A 328 LEU VAL ALA HIS GLY ARG MET LYS GLU LYS GLU ALA ARG SEQRES 10 A 328 SER LYS PHE ARG GLN ILE VAL SER ALA VAL GLN TYR CYS SEQRES 11 A 328 HIS GLN LYS ARG ILE VAL HIS ARG ASP LEU LYS ALA GLU SEQRES 12 A 328 ASN LEU LEU LEU ASP ALA ASP MET ASN ILE LYS ILE ALA SEQRES 13 A 328 ASP PHE GLY PHE SER ASN GLU PHE THR VAL GLY GLY LYS SEQRES 14 A 328 LEU ASP ALA PHE CYS GLY ALA PRO PRO TYR ALA ALA PRO SEQRES 15 A 328 GLU LEU PHE GLN GLY LYS LYS TYR ASP GLY PRO GLU VAL SEQRES 16 A 328 ASP VAL TRP SER LEU GLY VAL ILE LEU TYR THR LEU VAL SEQRES 17 A 328 SER GLY SER LEU PRO PHE ASP GLY GLN ASN LEU LYS GLU SEQRES 18 A 328 LEU ARG GLU ARG VAL LEU ARG GLY LYS TYR ARG ILE PRO SEQRES 19 A 328 PHE TYR MET SER THR ASP CYS GLU ASN LEU LEU LYS ARG SEQRES 20 A 328 PHE LEU VAL LEU ASN PRO ILE LYS ARG GLY THR LEU GLU SEQRES 21 A 328 GLN ILE MET LYS ASP ARG TRP ILE ASN ALA GLY HIS GLU SEQRES 22 A 328 GLU ASP GLU LEU LYS PRO PHE VAL GLU PRO GLU LEU ASP SEQRES 23 A 328 ILE SER ASP GLN LYS ARG ILE ASP ILE MET VAL GLY MET SEQRES 24 A 328 GLY TYR SER GLN GLU GLU ILE GLN GLU SER LEU SER LYS SEQRES 25 A 328 MET LYS TYR ASP GLU ILE THR ALA THR TYR LEU LEU LEU SEQRES 26 A 328 GLY ARG LYS SEQRES 1 B 328 GLY ASN SER ILE ALA SER CYS ALA ASP GLU GLN PRO HIS SEQRES 2 B 328 ILE GLY ASN TYR ARG LEU LEU LYS THR ILE GLY LYS GLY SEQRES 3 B 328 ASN PHE ALA LYS VAL LYS LEU ALA ARG HIS ILE LEU THR SEQRES 4 B 328 GLY ARG GLU VAL ALA ILE LYS ILE ILE ASP LYS THR GLN SEQRES 5 B 328 LEU ASN PRO THR SER LEU GLN LYS LEU PHE ARG GLU VAL SEQRES 6 B 328 ARG ILE MET LYS ILE LEU ASN HIS PRO ASN ILE VAL LYS SEQRES 7 B 328 LEU PHE GLU VAL ILE GLU THR GLU LYS THR LEU TYR LEU SEQRES 8 B 328 ILE MET GLU TYR ALA SER GLY GLY GLU VAL PHE ASP TYR SEQRES 9 B 328 LEU VAL ALA HIS GLY ARG MET LYS GLU LYS GLU ALA ARG SEQRES 10 B 328 SER LYS PHE ARG GLN ILE VAL SER ALA VAL GLN TYR CYS SEQRES 11 B 328 HIS GLN LYS ARG ILE VAL HIS ARG ASP LEU LYS ALA GLU SEQRES 12 B 328 ASN LEU LEU LEU ASP ALA ASP MET ASN ILE LYS ILE ALA SEQRES 13 B 328 ASP PHE GLY PHE SER ASN GLU PHE THR VAL GLY GLY LYS SEQRES 14 B 328 LEU ASP ALA PHE CYS GLY ALA PRO PRO TYR ALA ALA PRO SEQRES 15 B 328 GLU LEU PHE GLN GLY LYS LYS TYR ASP GLY PRO GLU VAL SEQRES 16 B 328 ASP VAL TRP SER LEU GLY VAL ILE LEU TYR THR LEU VAL SEQRES 17 B 328 SER GLY SER LEU PRO PHE ASP GLY GLN ASN LEU LYS GLU SEQRES 18 B 328 LEU ARG GLU ARG VAL LEU ARG GLY LYS TYR ARG ILE PRO SEQRES 19 B 328 PHE TYR MET SER THR ASP CYS GLU ASN LEU LEU LYS ARG SEQRES 20 B 328 PHE LEU VAL LEU ASN PRO ILE LYS ARG GLY THR LEU GLU SEQRES 21 B 328 GLN ILE MET LYS ASP ARG TRP ILE ASN ALA GLY HIS GLU SEQRES 22 B 328 GLU ASP GLU LEU LYS PRO PHE VAL GLU PRO GLU LEU ASP SEQRES 23 B 328 ILE SER ASP GLN LYS ARG ILE ASP ILE MET VAL GLY MET SEQRES 24 B 328 GLY TYR SER GLN GLU GLU ILE GLN GLU SER LEU SER LYS SEQRES 25 B 328 MET LYS TYR ASP GLU ILE THR ALA THR TYR LEU LEU LEU SEQRES 26 B 328 GLY ARG LYS FORMUL 3 HOH *398(H2 O) HELIX 1 1 THR A 90 LEU A 92 5 3 HELIX 2 2 ASN A 93 LEU A 110 1 18 HELIX 3 3 GLU A 139 GLY A 148 1 10 HELIX 4 4 LYS A 151 LYS A 172 1 22 HELIX 5 5 LYS A 180 GLU A 182 5 3 HELIX 6 6 SER A 200 THR A 204 5 5 HELIX 7 7 GLY A 207 ALA A 211 5 5 HELIX 8 8 ALA A 215 ALA A 219 5 5 HELIX 9 9 ALA A 220 GLY A 226 1 7 HELIX 10 10 GLY A 231 GLY A 249 1 19 HELIX 11 11 ASN A 257 GLY A 268 1 12 HELIX 12 12 SER A 277 LEU A 288 1 12 HELIX 13 13 THR A 297 MET A 302 1 6 HELIX 14 14 ASP A 328 MET A 338 1 11 HELIX 15 15 SER A 341 LYS A 351 1 11 HELIX 16 16 ASP A 355 GLY A 365 1 11 HELIX 17 17 THR B 90 LEU B 92 5 3 HELIX 18 18 ASN B 93 LEU B 110 1 18 HELIX 19 19 GLU B 139 GLY B 148 1 10 HELIX 20 20 LYS B 151 LYS B 172 1 22 HELIX 21 21 LYS B 180 GLU B 182 5 3 HELIX 22 22 SER B 200 THR B 204 5 5 HELIX 23 23 GLY B 207 ALA B 215 1 9 HELIX 24 24 PRO B 216 ALA B 219 5 4 HELIX 25 25 ALA B 220 GLN B 225 5 6 HELIX 26 26 GLY B 231 GLY B 249 1 19 HELIX 27 27 ASN B 257 GLY B 268 1 12 HELIX 28 28 SER B 277 LEU B 288 1 12 HELIX 29 29 ASN B 291 ARG B 295 5 5 HELIX 30 30 THR B 297 MET B 302 1 6 HELIX 31 31 ASP B 304 ALA B 309 1 6 HELIX 32 32 ASP B 328 GLY B 339 1 12 HELIX 33 33 SER B 341 LYS B 351 1 11 HELIX 34 34 ASP B 355 GLY B 365 1 11 SHEET 1 A 6 HIS A 52 ILE A 53 0 SHEET 2 A 6 TYR A 56 LYS A 64 -1 O TYR A 56 N ILE A 53 SHEET 3 A 6 ALA A 68 HIS A 75 -1 O LEU A 72 N LEU A 59 SHEET 4 A 6 GLU A 81 ASP A 88 -1 O ILE A 86 N LYS A 69 SHEET 5 A 6 THR A 127 MET A 132 -1 O LEU A 128 N ILE A 87 SHEET 6 A 6 LEU A 118 GLU A 123 -1 N PHE A 119 O ILE A 131 SHEET 1 B 2 LEU A 184 LEU A 186 0 SHEET 2 B 2 ILE A 192 ILE A 194 -1 O LYS A 193 N LEU A 185 SHEET 1 C 6 HIS B 52 ILE B 53 0 SHEET 2 C 6 TYR B 56 LYS B 64 -1 O TYR B 56 N ILE B 53 SHEET 3 C 6 ALA B 68 HIS B 75 -1 O VAL B 70 N GLY B 63 SHEET 4 C 6 GLU B 81 ASP B 88 -1 O ILE B 84 N LYS B 71 SHEET 5 C 6 THR B 127 MET B 132 -1 O LEU B 128 N ILE B 87 SHEET 6 C 6 LEU B 118 GLU B 123 -1 N PHE B 119 O ILE B 131 SHEET 1 D 2 LEU B 184 LEU B 186 0 SHEET 2 D 2 ILE B 192 ILE B 194 -1 O LYS B 193 N LEU B 185 SSBOND 1 CYS A 213 CYS B 213 1555 1555 2.06 CRYST1 96.520 95.330 111.080 90.00 106.39 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010361 0.000000 0.003047 0.00000 SCALE2 0.000000 0.010490 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009384 0.00000