PDB Short entry for 3FZR HEADER TRANSFERASE 26-JAN-09 3FZR TITLE CRYSTAL STRUCTURE OF PYK2 COMPLEXED WITH PF-431396 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TYROSINE KINASE 2 BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 416-692, PROTEIN KINASE DOMAIN; COMPND 5 SYNONYM: FOCAL ADHESION KINASE 2, FADK 2, PROLINE-RICH TYROSINE COMPND 6 KINASE 2, CELL ADHESION KINASE BETA, CAK BETA, CALCIUM-DEPENDENT COMPND 7 TYROSINE KINASE, CADTK, RELATED ADHESION FOCAL TYROSINE KINASE, COMPND 8 RAFTK; COMPND 9 EC: 2.7.10.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS PYK2, KINASE, DFG, ALTERNATIVE SPLICING, ATP-BINDING, CELL MEMBRANE, KEYWDS 2 CYTOPLASM, MEMBRANE, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, KEYWDS 3 POLYMORPHISM, TRANSFERASE, TYROSINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR S.HAN REVDAT 3 21-FEB-24 3FZR 1 REMARK REVDAT 2 19-JAN-10 3FZR 1 JRNL REVDAT 1 31-MAR-09 3FZR 0 JRNL AUTH S.HAN,A.MISTRY,J.S.CHANG,D.CUNNINGHAM,M.GRIFFOR, JRNL AUTH 2 P.C.BONNETTE,H.WANG,B.A.CHRUNYK,G.E.ASPNES,D.P.WALKER, JRNL AUTH 3 A.D.BROSIUS,L.BUCKBINDER JRNL TITL STRUCTURAL CHARACTERIZATION OF PROLINE-RICH TYROSINE KINASE JRNL TITL 2 2 (PYK2) REVEALS A UNIQUE (DFG-OUT) CONFORMATION AND ENABLES JRNL TITL 3 INHIBITOR DESIGN. JRNL REF J.BIOL.CHEM. V. 284 13193 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19244237 JRNL DOI 10.1074/JBC.M809038200 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.1.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 12412 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 601 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.86 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.48 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1836 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2697 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1734 REMARK 3 BIN R VALUE (WORKING SET) : 0.2624 REMARK 3 BIN FREE R VALUE : 0.3903 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.56 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 102 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2114 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 59 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.19307 REMARK 3 B22 (A**2) : 3.19307 REMARK 3 B33 (A**2) : -6.38614 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.356 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2205 ; 2.000 ; NULL REMARK 3 BOND ANGLES : 2976 ; 2.000 ; NULL REMARK 3 TORSION ANGLES : 453 ; 0.000 ; NULL REMARK 3 TRIGONAL CARBON PLANES : 60 ; 2.000 ; NULL REMARK 3 GENERAL PLANES : 310 ; 5.000 ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : 2205 ; 20.000 ; NULL REMARK 3 BAD NON-BONDED CONTACTS : 85 ; 5.000 ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.41 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12497 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.25500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 0.2M MGCL2, 20-27% REMARK 280 PEG3350, 1MM TCEP, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 53.66300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 53.66300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 53.66300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 53.66300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 53.66300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.66300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 53.66300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.66300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 416 REMARK 465 GLN A 417 REMARK 465 TYR A 418 REMARK 465 TYR A 573 REMARK 465 ILE A 574 REMARK 465 GLU A 575 REMARK 465 ASP A 576 REMARK 465 GLU A 577 REMARK 465 ASP A 578 REMARK 465 TYR A 579 REMARK 465 TYR A 580 REMARK 465 LYS A 581 REMARK 465 ALA A 582 REMARK 465 SER A 583 REMARK 465 VAL A 584 REMARK 465 GLU A 692 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 20 O HOH A 20 8666 1.67 REMARK 500 OD2 ASP A 688 OD2 ASP A 688 7555 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 497 C - N - CA ANGL. DEV. = -15.8 DEGREES REMARK 500 PRO A 506 C - N - CA ANGL. DEV. = 12.0 DEGREES REMARK 500 PRO A 506 C - N - CD ANGL. DEV. = -16.7 DEGREES REMARK 500 VAL A 552 CB - CA - C ANGL. DEV. = 11.7 DEGREES REMARK 500 PRO A 560 C - N - CD ANGL. DEV. = -15.1 DEGREES REMARK 500 PRO A 645 C - N - CA ANGL. DEV. = 12.9 DEGREES REMARK 500 PRO A 645 C - N - CD ANGL. DEV. = -12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 428 -33.07 -131.24 REMARK 500 GLU A 438 143.19 -35.11 REMARK 500 ASN A 446 -136.15 -53.61 REMARK 500 HIS A 447 10.80 -150.55 REMARK 500 LYS A 460 -118.15 2.33 REMARK 500 ASP A 462 121.95 -20.56 REMARK 500 THR A 464 -133.37 -20.69 REMARK 500 ASP A 482 112.43 -166.23 REMARK 500 GLU A 495 -102.48 177.30 REMARK 500 GLU A 496 120.83 170.25 REMARK 500 ASN A 517 22.50 -159.65 REMARK 500 VAL A 523 -27.78 -29.91 REMARK 500 ASP A 567 73.46 113.74 REMARK 500 PHE A 568 106.83 151.46 REMARK 500 PRO A 588 59.61 -60.02 REMARK 500 ARG A 600 22.82 34.05 REMARK 500 PHE A 621 52.44 39.71 REMARK 500 PHE A 626 45.31 39.65 REMARK 500 LYS A 632 1.14 -40.43 REMARK 500 ASP A 648 -59.44 -24.49 REMARK 500 PRO A 651 -179.19 -54.75 REMARK 500 VAL A 682 -16.14 -49.14 REMARK 500 ILE A 689 -8.78 -53.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3JZ A 999 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FZO RELATED DB: PDB REMARK 900 PYK2 APO STRUCTURE REMARK 900 RELATED ID: 3FZP RELATED DB: PDB REMARK 900 PYK2 COMPLEXED WITH ATPGS REMARK 900 RELATED ID: 3FZS RELATED DB: PDB REMARK 900 RELATED ID: 3FZT RELATED DB: PDB DBREF 3FZR A 416 692 UNP Q14289 FAK2_HUMAN 416 692 SEQRES 1 A 277 PRO GLN TYR GLY ILE ALA ARG GLU ASP VAL VAL LEU ASN SEQRES 2 A 277 ARG ILE LEU GLY GLU GLY PHE PHE GLY GLU VAL TYR GLU SEQRES 3 A 277 GLY VAL TYR THR ASN HIS LYS GLY GLU LYS ILE ASN VAL SEQRES 4 A 277 ALA VAL LYS THR CYS LYS LYS ASP CYS THR LEU ASP ASN SEQRES 5 A 277 LYS GLU LYS PHE MET SER GLU ALA VAL ILE MET LYS ASN SEQRES 6 A 277 LEU ASP HIS PRO HIS ILE VAL LYS LEU ILE GLY ILE ILE SEQRES 7 A 277 GLU GLU GLU PRO THR TRP ILE ILE MET GLU LEU TYR PRO SEQRES 8 A 277 TYR GLY GLU LEU GLY HIS TYR LEU GLU ARG ASN LYS ASN SEQRES 9 A 277 SER LEU LYS VAL LEU THR LEU VAL LEU TYR SER LEU GLN SEQRES 10 A 277 ILE CYS LYS ALA MET ALA TYR LEU GLU SER ILE ASN CYS SEQRES 11 A 277 VAL HIS ARG ASP ILE ALA VAL ARG ASN ILE LEU VAL ALA SEQRES 12 A 277 SER PRO GLU CYS VAL LYS LEU GLY ASP PHE GLY LEU SER SEQRES 13 A 277 ARG TYR ILE GLU ASP GLU ASP TYR TYR LYS ALA SER VAL SEQRES 14 A 277 THR ARG LEU PRO ILE LYS TRP MET SER PRO GLU SER ILE SEQRES 15 A 277 ASN PHE ARG ARG PHE THR THR ALA SER ASP VAL TRP MET SEQRES 16 A 277 PHE ALA VAL CYS MET TRP GLU ILE LEU SER PHE GLY LYS SEQRES 17 A 277 GLN PRO PHE PHE TRP LEU GLU ASN LYS ASP VAL ILE GLY SEQRES 18 A 277 VAL LEU GLU LYS GLY ASP ARG LEU PRO LYS PRO ASP LEU SEQRES 19 A 277 CYS PRO PRO VAL LEU TYR THR LEU MET THR ARG CYS TRP SEQRES 20 A 277 ASP TYR ASP PRO SER ASP ARG PRO ARG PHE THR GLU LEU SEQRES 21 A 277 VAL CYS SER LEU SER ASP VAL TYR GLN MET GLU LYS ASP SEQRES 22 A 277 ILE ALA MET GLU HET 3JZ A 999 35 HET PO4 A 1 5 HETNAM 3JZ N-METHYL-N-{2-[({2-[(2-OXO-2,3-DIHYDRO-1H-INDOL-5-YL) HETNAM 2 3JZ AMINO]-5-(TRIFLUOROMETHYL)PYRIMIDIN-4-YL}AMINO) HETNAM 3 3JZ METHYL]PHENYL}METHANESULFONAMIDE HETNAM PO4 PHOSPHATE ION FORMUL 2 3JZ C22 H21 F3 N6 O3 S FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *59(H2 O) HELIX 1 1 ALA A 421 GLU A 423 5 3 HELIX 2 2 CYS A 463 LEU A 481 1 19 HELIX 3 3 GLU A 509 ARG A 516 1 8 HELIX 4 4 LYS A 522 ILE A 543 1 22 HELIX 5 5 ALA A 551 ARG A 553 5 3 HELIX 6 6 PRO A 588 MET A 592 5 5 HELIX 7 7 SER A 593 PHE A 599 1 7 HELIX 8 8 THR A 603 SER A 620 1 18 HELIX 9 9 GLU A 630 LYS A 632 5 3 HELIX 10 10 ASP A 633 GLY A 641 1 9 HELIX 11 11 PRO A 651 TRP A 662 1 12 HELIX 12 12 ASP A 665 ARG A 669 5 5 HELIX 13 13 ARG A 671 MET A 685 1 15 SHEET 1 A 5 VAL A 425 GLU A 433 0 SHEET 2 A 5 GLU A 438 THR A 445 -1 O GLU A 441 N ASN A 428 SHEET 3 A 5 LYS A 451 LYS A 457 -1 O VAL A 456 N TYR A 440 SHEET 4 A 5 TRP A 499 GLU A 503 -1 O ILE A 500 N LYS A 457 SHEET 5 A 5 LEU A 489 ILE A 493 -1 N GLY A 491 O ILE A 501 SHEET 1 B 2 VAL A 546 HIS A 547 0 SHEET 2 B 2 LEU A 570 SER A 571 -1 O SER A 571 N VAL A 546 SHEET 1 C 2 ILE A 555 SER A 559 0 SHEET 2 C 2 CYS A 562 LEU A 565 -1 O LYS A 564 N LEU A 556 CISPEP 1 GLU A 496 PRO A 497 0 -2.97 SITE 1 AC1 15 HOH A 12 LEU A 431 GLY A 432 GLU A 433 SITE 2 AC1 15 GLY A 434 VAL A 439 VAL A 487 MET A 502 SITE 3 AC1 15 GLU A 503 LEU A 504 TYR A 505 GLY A 508 SITE 4 AC1 15 GLU A 509 ARG A 553 LEU A 556 SITE 1 AC2 4 HOH A 29 PRO A 484 HIS A 485 LYS A 535 CRYST1 107.326 107.326 75.786 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009317 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009317 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013195 0.00000