PDB Short entry for 3G5B
HEADER    APOPTOSIS                               04-FEB-09   3G5B              
TITLE     THE STRUCTURE OF UNC5B CYTOPLASMIC DOMAIN                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: NETRIN RECEPTOR UNC5B;                                     
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 541-945;                                      
COMPND   5 SYNONYM: PROTEIN UNC-5 HOMOLOG B, UNC-5 HOMOLOG 2;                   
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;                              
SOURCE   3 ORGANISM_COMMON: RAT;                                                
SOURCE   4 ORGANISM_TAXID: 10116;                                               
SOURCE   5 GENE: UNC5B;                                                         
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3);                                
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET32                            
KEYWDS    ZU5, DEATH DOMAIN, UPA, APOPTOSIS, DEVELOPMENTAL PROTEIN,             
KEYWDS   2 GLYCOPROTEIN, IMMUNOGLOBULIN DOMAIN, MEMBRANE, PHOSPHOPROTEIN,       
KEYWDS   3 RECEPTOR, TRANSMEMBRANE                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.WANG,Z.WEI,M.ZHANG                                                  
REVDAT   2   10-NOV-21 3G5B    1       REMARK SEQADV                            
REVDAT   1   07-APR-09 3G5B    0                                                
JRNL        AUTH   R.WANG,Z.WEI,H.JIN,H.WU,C.YU,W.WEN,L.-N.CHAN,Z.WEN,M.ZHANG   
JRNL        TITL   AUTOINHIBITION OF UNC5B REVEALED BY THE CYTOPLASMIC DOMAIN   
JRNL        TITL 2 STRUCTURE OF THE RECEPTOR                                    
JRNL        REF    MOL.CELL                      V.  33   692 2009              
JRNL        REFN                   ISSN 1097-2765                               
JRNL        PMID   19328064                                                     
JRNL        DOI    10.1016/J.MOLCEL.2009.02.016                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 27.78                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.4                           
REMARK   3   NUMBER OF REFLECTIONS             : 25576                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.196                           
REMARK   3   R VALUE            (WORKING SET) : 0.193                           
REMARK   3   FREE R VALUE                     : 0.250                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1293                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.05                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 1666                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 94.61                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2340                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 108                          
REMARK   3   BIN FREE R VALUE                    : 0.3220                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2963                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 15                                      
REMARK   3   SOLVENT ATOMS            : 226                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 36.75                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 1.64000                                              
REMARK   3    B22 (A**2) : 0.83000                                              
REMARK   3    B33 (A**2) : -2.47000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.211         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.187         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.143         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.206         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.952                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.917                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3076 ; 0.009 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  4195 ; 1.185 ; 1.977       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   393 ; 6.099 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   125 ;33.648 ;24.000       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   515 ;13.910 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    16 ;16.357 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   484 ; 0.074 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2288 ; 0.004 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  1312 ; 0.190 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  2063 ; 0.299 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   234 ; 0.131 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    73 ; 0.173 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    19 ; 0.136 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1989 ; 1.980 ; 2.000       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  3109 ; 3.033 ; 3.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1245 ; 3.932 ; 4.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  1080 ; 5.546 ; 6.000       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3G5B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-FEB-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000051441.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 01-JUN-07                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU MICROMAX-007                
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : NULL                               
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS IV                    
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM                             
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 25672                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.8                               
REMARK 200  DATA REDUNDANCY                : 6.500                              
REMARK 200  R MERGE                    (I) : 0.07400                            
REMARK 200  R SYM                      (I) : 0.07400                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.11                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 95.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.00                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.38100                            
REMARK 200  R SYM FOR SHELL            (I) : 0.38100                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS                        
REMARK 200 SOFTWARE USED: SHARP, RESOLVE                                        
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 41.05                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4~0.5M AMMONIUM PHOSPHATE, 0.1M MES    
REMARK 280  BUFFER, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       25.12150            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       59.05500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       31.35500            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       59.05500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       25.12150            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       31.35500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ALA A   829                                                      
REMARK 465     GLU A   830                                                      
REMARK 465     THR A   831                                                      
REMARK 465     PRO A   832                                                      
REMARK 465     ALA A   833                                                      
REMARK 465     GLY A   834                                                      
REMARK 465     SER A   835                                                      
REMARK 465     LEU A   836                                                      
REMARK 465     ASP A   837                                                      
REMARK 465     ALA A   838                                                      
REMARK 465     LEU A   839                                                      
REMARK 465     CYS A   840                                                      
REMARK 465     SER A   841                                                      
REMARK 465     ALA A   842                                                      
REMARK 465     PRO A   843                                                      
REMARK 465     GLY A   844                                                      
REMARK 465     ASN A   845                                                      
REMARK 465     ALA A   846                                                      
REMARK 465     ALA A   847                                                      
REMARK 465     GLY A   943                                                      
REMARK 465     ASP A   944                                                      
REMARK 465     CYS A   945                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ILE A 629    CG1  CG2  CD1                                       
REMARK 470     TYR A 854    CG   CD1  CD2  CE1  CE2  CZ   OH                    
REMARK 470     ARG A 876    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLN A 915    CG   CD   OE1  NE2                                  
REMARK 470     ASP A 916    CG   OD1  OD2                                       
REMARK 470     ASP A 917    CG   OD1  OD2                                       
REMARK 470     ASP A 942    CG   OD1  OD2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A 630     -142.10    -55.26                                   
REMARK 500    ASP A 653        1.88     90.97                                   
REMARK 500    ASP A 653        0.64     91.94                                   
REMARK 500    ASP A 879     -150.21   -136.62                                   
REMARK 500    ASP A 916      -95.62   -106.83                                   
REMARK 500    SER A 933      127.64    -35.87                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 3                   
DBREF  3G5B A  541   945  UNP    O08722   UNC5B_RAT      541    945             
SEQADV 3G5B GLY A  542  UNP  O08722    SER   542 ENGINEERED MUTATION            
SEQADV 3G5B PRO A  744  UNP  O08722    THR   744 ENGINEERED MUTATION            
SEQRES   1 A  405  PRO GLY SER SER VAL SER GLY THR PHE GLY CYS LEU GLY          
SEQRES   2 A  405  GLY ARG LEU THR ILE PRO GLY THR GLY VAL SER LEU LEU          
SEQRES   3 A  405  VAL PRO ASN GLY ALA ILE PRO GLN GLY LYS PHE TYR ASP          
SEQRES   4 A  405  LEU TYR LEU ARG ILE ASN LYS THR GLU SER THR LEU PRO          
SEQRES   5 A  405  LEU SER GLU GLY SER GLN THR VAL LEU SER PRO SER VAL          
SEQRES   6 A  405  THR CYS GLY PRO THR GLY LEU LEU LEU CYS ARG PRO VAL          
SEQRES   7 A  405  VAL LEU THR VAL PRO HIS CYS ALA GLU VAL ILE ALA GLY          
SEQRES   8 A  405  ASP TRP ILE PHE GLN LEU LYS THR GLN ALA HIS GLN GLY          
SEQRES   9 A  405  HIS TRP GLU GLU VAL VAL THR LEU ASP GLU GLU THR LEU          
SEQRES  10 A  405  ASN THR PRO CYS TYR CYS GLN LEU GLU ALA LYS SER CYS          
SEQRES  11 A  405  HIS ILE LEU LEU ASP GLN LEU GLY THR TYR VAL PHE THR          
SEQRES  12 A  405  GLY GLU SER TYR SER ARG SER ALA VAL LYS ARG LEU GLN          
SEQRES  13 A  405  LEU ALA ILE PHE ALA PRO ALA LEU CYS THR SER LEU GLU          
SEQRES  14 A  405  TYR SER LEU ARG VAL TYR CYS LEU GLU ASP THR PRO ALA          
SEQRES  15 A  405  ALA LEU LYS GLU VAL LEU GLU LEU GLU ARG THR LEU GLY          
SEQRES  16 A  405  GLY TYR LEU VAL GLU GLU PRO LYS PRO LEU LEU PHE LYS          
SEQRES  17 A  405  ASP SER TYR HIS ASN LEU ARG LEU SER LEU HIS ASP ILE          
SEQRES  18 A  405  PRO HIS ALA HIS TRP ARG SER LYS LEU LEU ALA LYS TYR          
SEQRES  19 A  405  GLN GLU ILE PRO PHE TYR HIS VAL TRP ASN GLY SER GLN          
SEQRES  20 A  405  LYS ALA LEU HIS CYS THR PHE THR LEU GLU ARG HIS SER          
SEQRES  21 A  405  LEU ALA SER THR GLU PHE THR CYS LYS VAL CYS VAL ARG          
SEQRES  22 A  405  GLN VAL GLU GLY GLU GLY GLN ILE PHE GLN LEU HIS THR          
SEQRES  23 A  405  THR LEU ALA GLU THR PRO ALA GLY SER LEU ASP ALA LEU          
SEQRES  24 A  405  CYS SER ALA PRO GLY ASN ALA ALA THR THR GLN LEU GLY          
SEQRES  25 A  405  PRO TYR ALA PHE LYS ILE PRO LEU SER ILE ARG GLN LYS          
SEQRES  26 A  405  ILE CYS ASN SER LEU ASP ALA PRO ASN SER ARG GLY ASN          
SEQRES  27 A  405  ASP TRP ARG LEU LEU ALA GLN LYS LEU SER MET ASP ARG          
SEQRES  28 A  405  TYR LEU ASN TYR PHE ALA THR LYS ALA SER PRO THR GLY          
SEQRES  29 A  405  VAL ILE LEU ASP LEU TRP GLU ALA ARG GLN GLN ASP ASP          
SEQRES  30 A  405  GLY ASP LEU ASN SER LEU ALA SER ALA LEU GLU GLU MET          
SEQRES  31 A  405  GLY LYS SER GLU MET LEU VAL ALA MET THR THR ASP GLY          
SEQRES  32 A  405  ASP CYS                                                      
HET    PO4  A   1       5                                                       
HET    PO4  A   2       5                                                       
HET    PO4  A   3       5                                                       
HETNAM     PO4 PHOSPHATE ION                                                    
FORMUL   2  PO4    3(O4 P 3-)                                                   
FORMUL   5  HOH   *226(H2 O)                                                    
HELIX    1   1 LYS A  586  SER A  594  5                                   9    
HELIX    2   2 THR A  720  GLY A  735  1                                  16    
HELIX    3   3 PRO A  778  ASN A  784  1                                   7    
HELIX    4   4 PRO A  859  ASP A  871  1                                  13    
HELIX    5   5 ASP A  879  LEU A  887  1                                   9    
HELIX    6   6 LEU A  893  THR A  898  1                                   6    
HELIX    7   7 SER A  901  GLN A  915  1                                  15    
HELIX    8   8 ASP A  919  MET A  930  1                                  12    
HELIX    9   9 SER A  933  THR A  941  1                                   9    
SHEET    1   A 5 SER A 544  PHE A 549  0                                        
SHEET    2   A 5 TYR A 578  ILE A 584 -1  O  LEU A 580   N  GLY A 547           
SHEET    3   A 5 VAL A 605  GLY A 608 -1  O  THR A 606   N  ARG A 583           
SHEET    4   A 5 GLY A 678  GLU A 685 -1  O  TYR A 680   N  VAL A 605           
SHEET    5   A 5 GLN A 598  VAL A 600 -1  N  THR A 599   O  GLY A 684           
SHEET    1   B 6 SER A 544  PHE A 549  0                                        
SHEET    2   B 6 TYR A 578  ILE A 584 -1  O  LEU A 580   N  GLY A 547           
SHEET    3   B 6 VAL A 605  GLY A 608 -1  O  THR A 606   N  ARG A 583           
SHEET    4   B 6 GLY A 678  GLU A 685 -1  O  TYR A 680   N  VAL A 605           
SHEET    5   B 6 ILE A 634  GLN A 640 -1  N  GLN A 636   O  THR A 683           
SHEET    6   B 6 TRP A 646  THR A 651 -1  O  VAL A 649   N  LEU A 637           
SHEET    1   C 6 CYS A 661  LEU A 665  0                                        
SHEET    2   C 6 SER A 669  LEU A 674 -1  O  LEU A 673   N  TYR A 662           
SHEET    3   C 6 VAL A 618  PRO A 623 -1  N  LEU A 620   O  ILE A 672           
SHEET    4   C 6 VAL A 563  VAL A 567 -1  N  LEU A 566   O  VAL A 619           
SHEET    5   C 6 GLY A 554  ILE A 558 -1  N  GLY A 554   O  VAL A 567           
SHEET    6   C 6 THR A 849  LEU A 851 -1  O  GLN A 850   N  ARG A 555           
SHEET    1   D 3 GLY A 736  LEU A 738  0                                        
SHEET    2   D 3 VAL A 692  PRO A 702 -1  N  ALA A 701   O  TYR A 737           
SHEET    3   D 3 LYS A 743  LYS A 748 -1  O  LYS A 743   N  LEU A 697           
SHEET    1   E 5 GLY A 736  LEU A 738  0                                        
SHEET    2   E 5 VAL A 692  PRO A 702 -1  N  ALA A 701   O  TYR A 737           
SHEET    3   E 5 GLU A 709  GLU A 718 -1  O  TYR A 715   N  ALA A 698           
SHEET    4   E 5 HIS A 791  ARG A 798 -1  O  LEU A 796   N  TYR A 710           
SHEET    5   E 5 TRP A 766  SER A 768 -1  N  ARG A 767   O  GLU A 797           
SHEET    1   F 4 GLN A 775  ILE A 777  0                                        
SHEET    2   F 4 LEU A 754  HIS A 759 -1  N  LEU A 756   O  GLN A 775           
SHEET    3   F 4 GLU A 805  GLN A 814 -1  O  ARG A 813   N  ARG A 755           
SHEET    4   F 4 GLY A 819  THR A 827 -1  O  GLN A 820   N  VAL A 812           
CISPEP   1 GLY A  608    PRO A  609          0        -0.59                     
CISPEP   2 GLY A  852    PRO A  853          0         3.09                     
SITE     1 AC1  7 HOH A  18  HOH A  66  TYR A 581  PRO A 609                    
SITE     2 AC1  7 THR A 610  ALA A 897  PRO A 902                               
SITE     1 AC2  5 HOH A  20  ALA A 764  HIS A 765  HIS A 791                    
SITE     2 AC2  5 HIS A 799                                                     
SITE     1 AC3  5 CYS A 615  ARG A 616  PRO A 617  LYS A 899                    
SITE     2 AC3  5 ALA A 900                                                     
CRYST1   50.243   62.710  118.110  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.019903  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.015946  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008467        0.00000