PDB Short entry for 3H4X HEADER HYDROLASE 21-APR-09 3H4X TITLE STRUCTURE OF A CA+2 DEPENDENT PHOSPHATIDYLINOSITOL-SPECIFIC TITLE 2 PHOSPHOLIPASE C (PI-PLC) ENZYME FROM STREPTOMYCES ANTIBIOTICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.4.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES ANTIBIOTICUS; SOURCE 3 ORGANISM_TAXID: 1890; SOURCE 4 GENE: PLC1, PLC1 AB439135.1:1234..2268; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) AND B834(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS PI-PLC, CA2+-DEPENDENT, CATALYTIC TIM BARREL, DISULFIDE-LINKED HELIX- KEYWDS 2 LOOP, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.R.JACKSON,T.L.SELBY REVDAT 1 12-MAY-10 3H4X 0 JRNL AUTH M.R.JACKSON,T.L.SELBY JRNL TITL CRYSTAL STRUCTURE OF A CA2+-DEPENDENT PI-PLC JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0068 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 97776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9804 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.23 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6344 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.1730 REMARK 3 BIN FREE R VALUE SET COUNT : 759 REMARK 3 BIN FREE R VALUE : 0.1810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2411 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 386 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : -0.37000 REMARK 3 B33 (A**2) : 0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.048 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.044 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.022 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2553 ; 0.004 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3428 ; 0.988 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 314 ; 5.442 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;29.883 ;23.276 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ; 9.959 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;11.585 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1975 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1603 ; 0.545 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2513 ; 0.994 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 950 ; 1.291 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 915 ; 2.032 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2553 ; 0.695 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 387 ; 1.582 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2516 ; 1.741 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3H4X COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-09. REMARK 100 THE RCSB ID CODE IS RCSB052696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.82653 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97776 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.230 REMARK 200 RESOLUTION RANGE LOW (A) : 51.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.280 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.2141 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.11 REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: ARPWARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 10000, 85MM SODIUM ACETATE PH REMARK 280 4.6, 170MM AMMONIUM ACETATE, 9% GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 25.98400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.40950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.98400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.40950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 GLU A 22 REMARK 465 PRO A 23 REMARK 465 ALA A 24 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD2 HIS A 37 OE1 GLU A 60 2.03 REMARK 500 OE1 GLU A 60 O HOH A 661 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 201 O HOH A 692 1554 1.83 REMARK 500 CH3 ACE A 369 O HOH A 580 2755 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 26 -167.40 -114.50 REMARK 500 SER A 71 147.97 92.14 REMARK 500 ARG A 100 -149.08 -99.77 REMARK 500 THR A 298 -51.69 -123.24 REMARK 500 HIS A 299 53.04 -119.55 REMARK 500 ALA A 322 -154.17 -160.83 REMARK 500 TRP A 324 44.85 -81.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 25 THR A 26 36.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 569 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH A 571 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 580 DISTANCE = 5.93 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 343 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 347 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 349 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 353 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 354 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 355 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 356 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 357 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 358 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 359 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 360 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 361 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 362 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 363 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 364 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 365 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 366 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE A 367 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE A 368 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE A 369 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE A 370 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE A 371 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H4W RELATED DB: PDB REMARK 900 SAME PROTEIN WITH THE DISULFIDE REDUCED AND ALTERNATIVE REMARK 900 POSITION OF GLU 60 SIDE CHAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE RESIDUE 264 IN COORDINATES IS OBSERVED AS ALA, WHERE IT IS REMARK 999 LISTED AS PRO IN UNP. DBREF 3H4X A 22 339 UNP B3A043 B3A043_STRAT 27 344 SEQADV 3H4X MET A 1 UNP B3A043 EXPRESSION TAG SEQADV 3H4X GLY A 2 UNP B3A043 EXPRESSION TAG SEQADV 3H4X SER A 3 UNP B3A043 EXPRESSION TAG SEQADV 3H4X SER A 4 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 5 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 6 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 7 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 8 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 9 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 10 UNP B3A043 EXPRESSION TAG SEQADV 3H4X SER A 11 UNP B3A043 EXPRESSION TAG SEQADV 3H4X SER A 12 UNP B3A043 EXPRESSION TAG SEQADV 3H4X GLY A 13 UNP B3A043 EXPRESSION TAG SEQADV 3H4X LEU A 14 UNP B3A043 EXPRESSION TAG SEQADV 3H4X VAL A 15 UNP B3A043 EXPRESSION TAG SEQADV 3H4X PRO A 16 UNP B3A043 EXPRESSION TAG SEQADV 3H4X ARG A 17 UNP B3A043 EXPRESSION TAG SEQADV 3H4X GLY A 18 UNP B3A043 EXPRESSION TAG SEQADV 3H4X SER A 19 UNP B3A043 EXPRESSION TAG SEQADV 3H4X HIS A 20 UNP B3A043 EXPRESSION TAG SEQADV 3H4X MET A 21 UNP B3A043 EXPRESSION TAG SEQADV 3H4X ALA A 264 UNP B3A043 PRO 269 CONFLICT SEQRES 1 A 339 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 339 LEU VAL PRO ARG GLY SER HIS MET GLU PRO ALA ALA THR SEQRES 3 A 339 THR TYR GLY THR SER THR SER VAL GLY VAL HIS ASN ALA SEQRES 4 A 339 TYR GLU LYS GLU LYS TYR ARG TYR PHE ALA ASP ALA LEU SEQRES 5 A 339 ASP SER GLY ALA ALA LEU LEU GLU LEU ASP LEU TRP SER SEQRES 6 A 339 ASN ALA LEU GLY ARG SER TRP ARG VAL SER HIS SER ASN SEQRES 7 A 339 PRO LEU GLY ASN ASN SER ASN CYS GLU GLY ALA ALA ASN SEQRES 8 A 339 ALA SER GLU LEU ARG THR LYS SER ARG ASP GLN ASP PHE SEQRES 9 A 339 ALA GLY CYS LEU SER ASP MET ARG ALA TRP HIS ASP ALA SEQRES 10 A 339 HIS PRO GLY HIS ARG PRO ILE LEU LEU LYS ILE GLU MET SEQRES 11 A 339 LYS ASP GLY PHE ASN ALA LYS GLY GLY ARG GLY PRO ALA SEQRES 12 A 339 GLU PHE ASP ALA LEU ILE ARG GLN LYS LEU GLY ASP ALA SEQRES 13 A 339 VAL TYR GLY PRO GLY ASP LEU THR GLY GLY HIS ALA THR SEQRES 14 A 339 ALA ASP GLU ALA VAL ARG ALA GLY GLY TRP PRO SER ARG SEQRES 15 A 339 ALA ASP LEU ALA GLY LYS PHE LEU PHE GLU LEU ILE PRO SEQRES 16 A 339 GLY THR VAL GLU GLU LYS ASN PRO PHE ASP LYS LEU TRP SEQRES 17 A 339 THR ASP VAL GLU TYR ALA GLY HIS LEU LYS ASP LEU ALA SEQRES 18 A 339 ALA GLN GLY LYS LEU ALA GLN SER THR ALA PHE PRO ALA SEQRES 19 A 339 VAL HIS GLY ALA ALA PRO GLY ASP PRO ARG GLU ARG TYR SEQRES 20 A 339 ALA ASP PRO ALA LEU ARG PRO TRP PHE VAL VAL PHE ASP SEQRES 21 A 339 GLY ASP ALA ALA THR TYR LEU ASN GLY SER ILE ASP THR SEQRES 22 A 339 SER TRP TYR ASP THR ARG HIS TYR LEU LEU ILE MET THR SEQRES 23 A 339 ASP ALA HIS ASN VAL PRO PRO VAL ILE ASP GLY THR HIS SEQRES 24 A 339 PRO THR GLU ALA GLU ALA LEU ALA ARG VAL ARG GLN LEU SEQRES 25 A 339 ALA ALA ALA HIS ALA SER PHE ALA THR ALA ASP TRP TYR SEQRES 26 A 339 PRO LEU PRO SER VAL LEU LYS THR VAL VAL PRO ARG GLY SEQRES 27 A 339 ALA HET CL A 340 1 HET EOH A 341 3 HET EOH A 342 3 HET EOH A 343 3 HET EOH A 344 3 HET EOH A 345 3 HET EOH A 346 3 HET EOH A 347 3 HET EOH A 348 3 HET EOH A 349 3 HET EOH A 350 3 HET EOH A 351 3 HET EOH A 352 3 HET EOH A 353 3 HET EOH A 354 3 HET EOH A 355 3 HET EOH A 356 3 HET EOH A 357 3 HET EOH A 358 3 HET EOH A 359 3 HET EOH A 360 3 HET ACT A 361 4 HET ACT A 362 4 HET ACT A 363 4 HET GOL A 364 6 HET GOL A 365 6 HET GOL A 366 6 HET ACE A 367 3 HET ACE A 368 3 HET ACE A 369 3 HET ACE A 370 3 HET ACE A 371 3 HETNAM CL CHLORIDE ION HETNAM EOH ETHANOL HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM ACE ACETYL GROUP FORMUL 2 CL CL 1- FORMUL 3 EOH 20(C2 H6 O) FORMUL 23 ACT 3(C2 H3 O2 1-) FORMUL 26 GOL 3(C3 H8 O3) FORMUL 29 ACE 5(C2 H4 O) FORMUL 34 HOH *386(H2 O) HELIX 1 1 TYR A 47 ASP A 53 1 7 HELIX 2 2 ASN A 91 LEU A 95 5 5 HELIX 3 3 ASP A 103 HIS A 118 1 16 HELIX 4 4 ASN A 135 GLY A 139 5 5 HELIX 5 5 GLY A 141 GLY A 154 1 14 HELIX 6 6 ASP A 155 VAL A 157 5 3 HELIX 7 7 GLY A 159 GLY A 165 1 7 HELIX 8 8 THR A 169 GLY A 178 1 10 HELIX 9 9 ARG A 182 ALA A 186 5 5 HELIX 10 10 VAL A 198 ASN A 202 5 5 HELIX 11 11 TRP A 208 GLN A 223 1 16 HELIX 12 12 GLY A 224 SER A 229 5 6 HELIX 13 13 ASP A 242 TYR A 247 5 6 HELIX 14 14 LEU A 252 PHE A 256 5 5 HELIX 15 15 ALA A 263 LEU A 267 1 5 HELIX 16 16 THR A 273 ARG A 279 1 7 HELIX 17 17 ASP A 287 VAL A 291 5 5 HELIX 18 18 THR A 301 ALA A 315 1 15 HELIX 19 19 LEU A 327 LYS A 332 1 6 SHEET 1 A 4 ARG A 73 VAL A 74 0 SHEET 2 A 4 LEU A 58 TRP A 64 -1 N TRP A 64 O ARG A 73 SHEET 3 A 4 SER A 31 VAL A 36 1 N VAL A 36 O LEU A 58 SHEET 4 A 4 VAL A 334 PRO A 336 -1 O VAL A 335 N THR A 32 SHEET 1 B10 ARG A 73 VAL A 74 0 SHEET 2 B10 LEU A 58 TRP A 64 -1 N TRP A 64 O ARG A 73 SHEET 3 B10 ILE A 124 MET A 130 1 O LYS A 127 N LEU A 61 SHEET 4 B10 PHE A 189 PRO A 195 1 O GLU A 192 N ILE A 128 SHEET 5 B10 PHE A 232 HIS A 236 1 O PHE A 232 N PHE A 191 SHEET 6 B10 VAL A 258 ASP A 262 1 O ASP A 260 N VAL A 235 SHEET 7 B10 LEU A 282 THR A 286 1 O ILE A 284 N PHE A 259 SHEET 8 B10 PHE A 319 ALA A 322 1 O PHE A 319 N MET A 285 SHEET 9 B10 SER A 31 VAL A 36 1 N GLY A 35 O ALA A 320 SHEET 10 B10 VAL A 334 PRO A 336 -1 O VAL A 335 N THR A 32 CISPEP 1 PRO A 292 PRO A 293 0 -3.20 SITE 1 AC1 5 THR A 27 GLY A 29 GLY A 178 TRP A 179 SITE 2 AC1 5 HOH A 636 SITE 1 AC2 3 ARG A 246 ALA A 248 GOL A 364 SITE 1 AC3 2 HOH A 454 HOH A 755 SITE 1 AC4 7 ALA A 92 GLU A 144 ALA A 147 HOH A 597 SITE 2 AC4 7 HOH A 610 HOH A 673 HOH A 674 SITE 1 AC5 4 ARG A 112 ARG A 150 GLN A 151 HOH A 388 SITE 1 AC6 1 ARG A 100 SITE 1 AC7 6 ALA A 67 LEU A 68 ASN A 135 GLY A 138 SITE 2 AC7 6 ARG A 140 HOH A 462 SITE 1 AC8 3 TRP A 208 HOH A 602 HOH A 754 SITE 1 AC9 3 ASP A 262 ASN A 290 HOH A 708 SITE 1 BC1 8 ALA A 105 GLY A 106 SER A 109 LYS A 152 SITE 2 BC1 8 EOH A 355 HOH A 539 HOH A 560 HOH A 582 SITE 1 BC2 4 SER A 93 GLU A 94 LYS A 225 GLN A 228 SITE 1 BC3 3 PRO A 119 GLY A 120 HOH A 479 SITE 1 BC4 6 ASP A 277 THR A 278 HIS A 280 HOH A 443 SITE 2 BC4 6 HOH A 486 HOH A 691 SITE 1 BC5 5 HIS A 216 ACE A 367 ACE A 368 HOH A 481 SITE 2 BC5 5 HOH A 681 SITE 1 BC6 4 LYS A 137 GLY A 138 GLY A 139 HOH A 533 SITE 1 BC7 4 ALA A 105 EOH A 349 HOH A 494 HOH A 501 SITE 1 BC8 4 TYR A 325 PRO A 326 HOH A 407 HOH A 544 SITE 1 BC9 4 ASN A 66 HIS A 167 HOH A 503 HOH A 687 SITE 1 CC1 8 GLU A 60 LYS A 127 ILE A 194 HIS A 236 SITE 2 CC1 8 ASP A 260 HOH A 438 HOH A 548 HOH A 747 SITE 1 CC2 4 ALA A 183 ALA A 186 HOH A 426 HOH A 534 SITE 1 CC3 2 GLY A 81 HOH A 395 SITE 1 CC4 5 HIS A 115 ASP A 155 HOH A 420 HOH A 530 SITE 2 CC4 5 HOH A 626 SITE 1 CC5 4 ASP A 262 HOH A 522 HOH A 557 HOH A 658 SITE 1 CC6 7 PRO A 293 VAL A 294 ILE A 295 GLU A 304 SITE 2 CC6 7 HOH A 477 HOH A 490 HOH A 613 SITE 1 CC7 11 ALA A 239 PRO A 240 ASP A 242 PRO A 243 SITE 2 CC7 11 GLU A 245 ARG A 246 ALA A 248 EOH A 341 SITE 3 CC7 11 HOH A 574 HOH A 592 HOH A 737 SITE 1 CC8 4 GLN A 223 GLY A 224 LYS A 225 HOH A 373 SITE 1 CC9 7 ARG A 70 SER A 71 GLY A 138 GLY A 139 SITE 2 CC9 7 ARG A 140 HOH A 501 HOH A 643 SITE 1 DC1 5 SER A 93 ALA A 143 GLU A 144 EOH A 353 SITE 2 DC1 5 ACE A 368 SITE 1 DC2 9 ALA A 136 GLY A 141 PRO A 142 ALA A 143 SITE 2 DC2 9 GLU A 144 EOH A 353 ACE A 367 ACE A 370 SITE 3 DC2 9 HOH A 489 SITE 1 DC3 6 GLY A 241 ASP A 242 PRO A 250 HOH A 571 SITE 2 DC3 6 HOH A 580 HOH A 592 SITE 1 DC4 4 PRO A 142 GLU A 212 ACE A 368 HOH A 396 SITE 1 DC5 8 LYS A 42 ASN A 83 ASP A 101 ALA A 183 SITE 2 DC5 8 ASP A 184 HOH A 452 HOH A 555 HOH A 649 CRYST1 51.968 154.819 41.324 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019243 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006459 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024199 0.00000