PDB Short entry for 3K22 HEADER TRANSCRIPTION 29-SEP-09 3K22 TITLE GLUCOCORTICOID RECEPTOR WITH BOUND ALANINAMIDE 10 WITH TIF2 PEPTIDE CAVEAT 3K22 JZR A 1731 HAS WRONG CHIRALITY AT ATOM C1 JZR B 1731 HAS CAVEAT 2 3K22 WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOCORTICOID RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GR, NUCLEAR RECEPTOR SUBFAMILY 3 GROUP C MEMBER 1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRANSCRIPTIONAL INTERMEDIARY FACTOR 2; COMPND 9 CHAIN: H, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GRL, NR3C1, PGR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHIS GST; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: PURCHASED KEYWDS GLUCOCORTICOID RECEPTOR, STEROID HORMONE RECEPTOR, NUCLEAR RECEPTOR, KEYWDS 2 GR, GLUCOCORTICOIDS, ALPHA HELICAL SANDWICH, META-CHANNEL, KEYWDS 3 ALTERNATIVE INITIATION, CHROMATIN REGULATOR, DISEASE MUTATION, DNA- KEYWDS 4 BINDING, ISOPEPTIDE BOND, LIPID-BINDING, METAL-BINDING, NUCLEUS, KEYWDS 5 PHOSPHOPROTEIN, PSEUDOHERMAPHRODITISM, RECEPTOR, STEROID-BINDING, KEYWDS 6 TRANSCRIPTION, TRANSCRIPTION REGULATION, ZINC-FINGER EXPDTA X-RAY DIFFRACTION AUTHOR K.B.BIGGADIKE,I.M.MCLAY,K.P.MADAUSS,S.P.WILLIAMS,R.K.BLEDSOE REVDAT 7 13-MAR-24 3K22 1 COMPND SOURCE REVDAT 6 21-FEB-24 3K22 1 REMARK REVDAT 5 13-OCT-21 3K22 1 SEQADV HETSYN REVDAT 4 29-JUL-20 3K22 1 CAVEAT REMARK SEQADV SITE REVDAT 3 01-NOV-17 3K22 1 REMARK REVDAT 2 25-SEP-13 3K22 1 REMARK VERSN REVDAT 1 11-AUG-10 3K22 0 JRNL AUTH K.BIGGADIKE,R.K.BLEDSOE,D.M.COE,T.W.COOPER,D.HOUSE, JRNL AUTH 2 M.A.IANNONE,S.J.MACDONALD,K.P.MADAUSS,I.M.MCLAY,T.J.SHIPLEY, JRNL AUTH 3 S.J.TAYLOR,T.B.TRAN,I.J.UINGS,V.WELLER,S.P.WILLIAMS JRNL TITL DESIGN AND X-RAY CRYSTAL STRUCTURES OF HIGH-POTENCY JRNL TITL 2 NONSTEROIDAL GLUCOCORTICOID AGONISTS EXPLOITING A NOVEL JRNL TITL 3 BINDING SITE ON THE RECEPTOR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 18114 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19822747 JRNL DOI 10.1073/PNAS.0909125106 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2889 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2831 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 200 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4182 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 126 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.01000 REMARK 3 B22 (A**2) : -4.01000 REMARK 3 B33 (A**2) : 6.02000 REMARK 3 B12 (A**2) : -2.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.220 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.191 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.221 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.499 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4428 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2980 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6004 ; 1.197 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7267 ; 1.148 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 519 ; 4.675 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 184 ;32.922 ;23.804 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 771 ;14.165 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;14.090 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 680 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4738 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 888 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1045 ; 0.177 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2983 ; 0.164 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2169 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2171 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 206 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.121 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 47 ; 0.163 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2700 ; 0.348 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1048 ; 0.053 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4214 ; 0.583 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2025 ; 0.740 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1790 ; 1.126 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 1000 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7058 34.9062 17.7335 REMARK 3 T TENSOR REMARK 3 T11: -0.2139 T22: -0.2275 REMARK 3 T33: -0.2886 T12: -0.0313 REMARK 3 T13: 0.0545 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 5.7200 L22: 5.0537 REMARK 3 L33: 1.2508 L12: -0.5824 REMARK 3 L13: -0.9383 L23: 0.0483 REMARK 3 S TENSOR REMARK 3 S11: -0.0861 S12: -0.1831 S13: -0.7369 REMARK 3 S21: -0.0025 S22: -0.0742 S23: -0.4937 REMARK 3 S31: 0.0067 S32: -0.0434 S33: 0.1603 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 1000 REMARK 3 ORIGIN FOR THE GROUP (A): -13.6298 40.2810 -18.3109 REMARK 3 T TENSOR REMARK 3 T11: -0.2733 T22: -0.2126 REMARK 3 T33: -0.2622 T12: 0.0029 REMARK 3 T13: 0.0131 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 5.4108 L22: 6.7692 REMARK 3 L33: 1.5253 L12: 0.2488 REMARK 3 L13: -0.7833 L23: -1.1108 REMARK 3 S TENSOR REMARK 3 S11: -0.0666 S12: -0.1526 S13: -0.5541 REMARK 3 S21: -0.0917 S22: -0.0671 S23: -0.4154 REMARK 3 S31: -0.0096 S32: 0.0821 S33: 0.1337 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3K22 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000055447. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41085 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.76900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.07667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.15333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.11500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.19167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.03833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 519 REMARK 465 SER A 520 REMARK 465 VAL A 521 REMARK 465 PRO A 522 REMARK 465 ALA A 523 REMARK 465 THR A 524 REMARK 465 LEU A 525 REMARK 465 SER A 617 REMARK 465 LYS A 777 REMARK 465 LYS H 740 REMARK 465 GLY B 519 REMARK 465 SER B 520 REMARK 465 VAL B 521 REMARK 465 PRO B 522 REMARK 465 ALA B 523 REMARK 465 SER B 617 REMARK 465 GLY B 706 REMARK 465 SER B 708 REMARK 465 LYS B 777 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 527 CG CD OE1 NE2 REMARK 470 GLU A 705 CG CD OE1 OE2 REMARK 470 GLN A 738 CD OE1 NE2 REMARK 470 MET A 745 CB SD CE REMARK 470 SER A 746 OG REMARK 470 ILE A 747 CG1 CG2 CD1 REMARK 470 SER A 765 OG REMARK 470 ASN A 766 CG OD1 ND2 REMARK 470 ASN A 768 CG OD1 ND2 REMARK 470 GLU H 741 N REMARK 470 LYS H 751 CG CD CE NZ REMARK 470 THR B 524 OG1 CG2 REMARK 470 LEU B 525 CG CD1 CD2 REMARK 470 GLN B 527 CG CD OE1 NE2 REMARK 470 GLU B 542 CG CD OE1 OE2 REMARK 470 ARG B 585 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 586 CG OD1 ND2 REMARK 470 SER B 616 OG REMARK 470 GLU B 631 CG CD OE1 OE2 REMARK 470 LYS B 677 CG CD CE NZ REMARK 470 ASP B 678 CG OD1 OD2 REMARK 470 LYS B 703 CG CD CE NZ REMARK 470 GLU B 705 CG CD OE1 OE2 REMARK 470 ASN B 707 CG OD1 ND2 REMARK 470 SER B 709 OG REMARK 470 GLN B 713 CD OE1 NE2 REMARK 470 SER B 746 OG REMARK 470 ILE B 747 CG1 CG2 CD1 REMARK 470 GLU B 748 CG CD OE1 OE2 REMARK 470 GLU B 755 CG CD OE1 OE2 REMARK 470 SER B 765 OG REMARK 470 ASN B 766 CG OD1 ND2 REMARK 470 ASN B 768 CG OD1 ND2 REMARK 470 LYS D 740 CG CD CE NZ REMARK 470 GLU D 741 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE1 TRP A 712 O PHE B 774 4565 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 627 89.34 -154.67 REMARK 500 SER A 682 45.45 -105.40 REMARK 500 ASN A 766 -70.27 -60.38 REMARK 500 SER B 682 44.77 -105.40 REMARK 500 ASN D 742 109.29 -57.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3K23 RELATED DB: PDB DBREF 3K22 A 521 777 UNP P04150 GCR_HUMAN 521 777 DBREF 3K22 B 521 777 UNP P04150 GCR_HUMAN 521 777 DBREF 3K22 H 740 751 PDB 3K22 3K22 740 751 DBREF 3K22 D 740 751 PDB 3K22 3K22 740 751 SEQADV 3K22 GLY A 519 UNP P04150 EXPRESSION TAG SEQADV 3K22 SER A 520 UNP P04150 EXPRESSION TAG SEQADV 3K22 TYR A 602 UNP P04150 PHE 602 ENGINEERED MUTATION SEQADV 3K22 GLY A 638 UNP P04150 CYS 638 ENGINEERED MUTATION SEQADV 3K22 GLY B 519 UNP P04150 EXPRESSION TAG SEQADV 3K22 SER B 520 UNP P04150 EXPRESSION TAG SEQADV 3K22 TYR B 602 UNP P04150 PHE 602 ENGINEERED MUTATION SEQADV 3K22 GLY B 638 UNP P04150 CYS 638 ENGINEERED MUTATION SEQRES 1 A 259 GLY SER VAL PRO ALA THR LEU PRO GLN LEU THR PRO THR SEQRES 2 A 259 LEU VAL SER LEU LEU GLU VAL ILE GLU PRO GLU VAL LEU SEQRES 3 A 259 TYR ALA GLY TYR ASP SER SER VAL PRO ASP SER THR TRP SEQRES 4 A 259 ARG ILE MET THR THR LEU ASN MET LEU GLY GLY ARG GLN SEQRES 5 A 259 VAL ILE ALA ALA VAL LYS TRP ALA LYS ALA ILE PRO GLY SEQRES 6 A 259 PHE ARG ASN LEU HIS LEU ASP ASP GLN MET THR LEU LEU SEQRES 7 A 259 GLN TYR SER TRP MET TYR LEU MET ALA PHE ALA LEU GLY SEQRES 8 A 259 TRP ARG SER TYR ARG GLN SER SER ALA ASN LEU LEU CYS SEQRES 9 A 259 PHE ALA PRO ASP LEU ILE ILE ASN GLU GLN ARG MET THR SEQRES 10 A 259 LEU PRO GLY MET TYR ASP GLN CYS LYS HIS MET LEU TYR SEQRES 11 A 259 VAL SER SER GLU LEU HIS ARG LEU GLN VAL SER TYR GLU SEQRES 12 A 259 GLU TYR LEU CYS MET LYS THR LEU LEU LEU LEU SER SER SEQRES 13 A 259 VAL PRO LYS ASP GLY LEU LYS SER GLN GLU LEU PHE ASP SEQRES 14 A 259 GLU ILE ARG MET THR TYR ILE LYS GLU LEU GLY LYS ALA SEQRES 15 A 259 ILE VAL LYS ARG GLU GLY ASN SER SER GLN ASN TRP GLN SEQRES 16 A 259 ARG PHE TYR GLN LEU THR LYS LEU LEU ASP SER MET HIS SEQRES 17 A 259 GLU VAL VAL GLU ASN LEU LEU ASN TYR CYS PHE GLN THR SEQRES 18 A 259 PHE LEU ASP LYS THR MET SER ILE GLU PHE PRO GLU MET SEQRES 19 A 259 LEU ALA GLU ILE ILE THR ASN GLN ILE PRO LYS TYR SER SEQRES 20 A 259 ASN GLY ASN ILE LYS LYS LEU LEU PHE HIS GLN LYS SEQRES 1 H 12 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS SEQRES 1 B 259 GLY SER VAL PRO ALA THR LEU PRO GLN LEU THR PRO THR SEQRES 2 B 259 LEU VAL SER LEU LEU GLU VAL ILE GLU PRO GLU VAL LEU SEQRES 3 B 259 TYR ALA GLY TYR ASP SER SER VAL PRO ASP SER THR TRP SEQRES 4 B 259 ARG ILE MET THR THR LEU ASN MET LEU GLY GLY ARG GLN SEQRES 5 B 259 VAL ILE ALA ALA VAL LYS TRP ALA LYS ALA ILE PRO GLY SEQRES 6 B 259 PHE ARG ASN LEU HIS LEU ASP ASP GLN MET THR LEU LEU SEQRES 7 B 259 GLN TYR SER TRP MET TYR LEU MET ALA PHE ALA LEU GLY SEQRES 8 B 259 TRP ARG SER TYR ARG GLN SER SER ALA ASN LEU LEU CYS SEQRES 9 B 259 PHE ALA PRO ASP LEU ILE ILE ASN GLU GLN ARG MET THR SEQRES 10 B 259 LEU PRO GLY MET TYR ASP GLN CYS LYS HIS MET LEU TYR SEQRES 11 B 259 VAL SER SER GLU LEU HIS ARG LEU GLN VAL SER TYR GLU SEQRES 12 B 259 GLU TYR LEU CYS MET LYS THR LEU LEU LEU LEU SER SER SEQRES 13 B 259 VAL PRO LYS ASP GLY LEU LYS SER GLN GLU LEU PHE ASP SEQRES 14 B 259 GLU ILE ARG MET THR TYR ILE LYS GLU LEU GLY LYS ALA SEQRES 15 B 259 ILE VAL LYS ARG GLU GLY ASN SER SER GLN ASN TRP GLN SEQRES 16 B 259 ARG PHE TYR GLN LEU THR LYS LEU LEU ASP SER MET HIS SEQRES 17 B 259 GLU VAL VAL GLU ASN LEU LEU ASN TYR CYS PHE GLN THR SEQRES 18 B 259 PHE LEU ASP LYS THR MET SER ILE GLU PHE PRO GLU MET SEQRES 19 B 259 LEU ALA GLU ILE ILE THR ASN GLN ILE PRO LYS TYR SER SEQRES 20 B 259 ASN GLY ASN ILE LYS LYS LEU LEU PHE HIS GLN LYS SEQRES 1 D 12 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS HET JZS A 1 36 HET JZR A1731 18 HET JZS B 1 36 HET JZR B1731 18 HET JZR B 778 18 HETNAM JZS N-[(1R)-2-AMINO-1-METHYL-2-OXOETHYL]-3-(6-METHYL-4-{[3, HETNAM 2 JZS 3,3-TRIFLUORO-2-HYDROXY-2-(TRIFLUOROMETHYL) HETNAM 3 JZS PROPYL]AMINO}-1H-INDAZOL-1-YL)BENZAMIDE HETNAM JZR HEXYL BETA-D-GLUCOPYRANOSIDE HETSYN JZR HEXYL BETA-D-GLUCOSIDE; HEXYL D-GLUCOSIDE; HEXYL HETSYN 2 JZR GLUCOSIDE FORMUL 5 JZS 2(C22 H21 F6 N5 O3) FORMUL 6 JZR 3(C12 H24 O6) FORMUL 10 HOH *44(H2 O) HELIX 1 1 THR A 531 ILE A 539 1 9 HELIX 2 2 SER A 555 ILE A 581 1 27 HELIX 3 3 HIS A 588 SER A 616 1 29 HELIX 4 4 ASN A 630 THR A 635 1 6 HELIX 5 5 GLY A 638 GLN A 657 1 20 HELIX 6 6 SER A 659 LEU A 672 1 14 HELIX 7 7 SER A 682 ARG A 704 1 23 HELIX 8 8 ASN A 707 SER A 709 5 3 HELIX 9 9 GLN A 710 ASP A 742 1 33 HELIX 10 10 PRO A 750 GLY A 767 1 18 HELIX 11 11 ASN H 742 LYS H 751 1 10 HELIX 12 12 THR B 524 THR B 529 1 6 HELIX 13 13 THR B 531 GLU B 540 1 10 HELIX 14 14 SER B 555 ALA B 580 1 26 HELIX 15 15 HIS B 588 ARG B 614 1 27 HELIX 16 16 ASN B 630 THR B 635 1 6 HELIX 17 17 GLY B 638 GLN B 657 1 20 HELIX 18 18 SER B 659 LEU B 672 1 14 HELIX 19 19 SER B 682 GLU B 705 1 24 HELIX 20 20 SER B 709 ASP B 742 1 34 HELIX 21 21 PRO B 750 GLY B 767 1 18 HELIX 22 22 ASN D 742 LYS D 751 1 10 SHEET 1 A 2 LEU A 621 ALA A 624 0 SHEET 2 A 2 LEU A 627 ILE A 629 -1 O ILE A 629 N LEU A 621 SHEET 1 B 2 SER A 674 PRO A 676 0 SHEET 2 B 2 ILE A 769 LYS A 771 -1 O LYS A 770 N VAL A 675 SHEET 1 C 2 LEU B 621 ALA B 624 0 SHEET 2 C 2 LEU B 627 ILE B 629 -1 O ILE B 629 N LEU B 621 SHEET 1 D 2 SER B 674 PRO B 676 0 SHEET 2 D 2 ILE B 769 LYS B 771 -1 O LYS B 770 N VAL B 675 CRYST1 127.597 127.597 78.230 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007837 0.004525 0.000000 0.00000 SCALE2 0.000000 0.009050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012783 0.00000