PDB Short entry for 3L5J HEADER IMMUNE SYSTEM 22-DEC-09 3L5J TITLE CRYSTAL STRUCTURE OF FNIII DOMAINS OF HUMAN GP130 (DOMAINS 4-6) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-6 RECEPTOR SUBUNIT BETA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 323-610; COMPND 5 SYNONYM: IL-6R-BETA, INTERLEUKIN-6 SIGNAL TRANSDUCER, MEMBRANE COMPND 6 GLYCOPROTEIN 130, GP130, CDW130, ONCOSTATIN-M RECEPTOR SUBUNIT ALPHA; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GP130; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-DUET KEYWDS CYTOKINE RECEPTOR, FIBRONECTIN TYPE III DOMAIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR N.J.KERSHAW,J.-G.ZHANG,T.P.J.GARRETT,P.E.CZABOTAR REVDAT 3 01-NOV-17 3L5J 1 REMARK REVDAT 2 05-APR-17 3L5J 1 JRNL VERSN REVDAT 1 12-MAY-10 3L5J 0 JRNL AUTH Y.XU,N.J.KERSHAW,C.S.LUO,P.SOO,M.J.POCOCK,P.E.CZABOTAR, JRNL AUTH 2 D.J.HILTON,N.A.NICOLA,T.P.GARRETT,J.G.ZHANG JRNL TITL CRYSTAL STRUCTURE OF THE ENTIRE ECTODOMAIN OF GP130: JRNL TITL 2 INSIGHTS INTO THE MOLECULAR ASSEMBLY OF THE TALL CYTOKINE JRNL TITL 3 RECEPTOR COMPLEXES. JRNL REF J.BIOL.CHEM. V. 285 21214 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20489211 JRNL DOI 10.1074/JBC.C110.129502 REMARK 2 REMARK 2 RESOLUTION. 3.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 15678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.1560 - 5.5220 0.99 2638 149 0.2070 0.2400 REMARK 3 2 5.5220 - 4.3860 0.98 2545 153 0.1680 0.2160 REMARK 3 3 4.3860 - 3.8320 0.95 2518 106 0.1920 0.2740 REMARK 3 4 3.8320 - 3.4820 0.97 2534 144 0.2280 0.2920 REMARK 3 5 3.4820 - 3.2330 0.94 2420 134 0.2380 0.2880 REMARK 3 6 3.2330 - 3.0420 0.85 2232 105 0.2650 0.3100 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 1.36 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 2.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.87500 REMARK 3 B22 (A**2) : -4.76800 REMARK 3 B33 (A**2) : 0.89300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.61800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4409 REMARK 3 ANGLE : 0.621 6060 REMARK 3 CHIRALITY : 0.042 710 REMARK 3 PLANARITY : 0.002 775 REMARK 3 DIHEDRAL : 13.620 1469 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3L5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056859. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95443 REMARK 200 MONOCHROMATOR : DIPOLE/BENGING MAGNET REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16494 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, NACL, TRIS-HCL, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.46800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.61050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.46800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.61050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 317 REMARK 465 HIS A 318 REMARK 465 THR A 319 REMARK 465 GLN A 320 REMARK 465 GLY A 321 REMARK 465 ASP B 315 REMARK 465 PRO B 316 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 306 CE NZ REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 TYR A 322 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 ARG A 350 CZ NH1 NH2 REMARK 470 TRP A 351 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 351 CZ3 CH2 REMARK 470 LYS A 352 CD CE NZ REMARK 470 SER A 353 OG REMARK 470 HIS A 354 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 364 CE NZ REMARK 470 GLN A 400 CG CD OE1 NE2 REMARK 470 LYS A 409 CD CE NZ REMARK 470 ARG A 425 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 426 CG CD OE1 OE2 REMARK 470 SER A 427 OG REMARK 470 LYS A 429 CD CE NZ REMARK 470 LYS A 441 CG CD CE NZ REMARK 470 ARG A 457 NE CZ NH1 NH2 REMARK 470 LYS A 468 CE NZ REMARK 470 LYS A 489 NZ REMARK 470 LYS A 493 CG CD CE NZ REMARK 470 LYS A 499 CG CD CE NZ REMARK 470 VAL A 503 CG1 CG2 REMARK 470 LYS A 506 CG CD CE NZ REMARK 470 LYS A 507 CG CD CE NZ REMARK 470 VAL A 508 CG1 CG2 REMARK 470 LYS A 510 CG CD CE NZ REMARK 470 ASN A 511 CG OD1 ND2 REMARK 470 GLU A 512 CG CD OE1 OE2 REMARK 470 ARG A 537 CD NE CZ NH1 NH2 REMARK 470 ILE A 539 CG1 CG2 CD1 REMARK 470 ILE A 540 CG1 CG2 CD1 REMARK 470 SER A 550 OG REMARK 470 GLU A 554 CG CD OE1 OE2 REMARK 470 GLU A 583 CG CD OE1 OE2 REMARK 470 THR A 588 OG1 CG2 REMARK 470 GLU B 301 CG CD OE1 OE2 REMARK 470 LYS B 306 CG CD CE NZ REMARK 470 LYS B 313 CG CD CE NZ REMARK 470 SER B 317 OG REMARK 470 THR B 319 OG1 CG2 REMARK 470 GLN B 320 CG CD OE1 NE2 REMARK 470 PHE B 335 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 336 CD OE1 OE2 REMARK 470 LYS B 340 CG CD CE NZ REMARK 470 ARG B 350 CZ NH1 NH2 REMARK 470 SER B 353 OG REMARK 470 HIS B 354 ND1 CD2 CE1 NE2 REMARK 470 LYS B 364 CG CD CE NZ REMARK 470 LEU B 383 CG CD1 CD2 REMARK 470 LYS B 386 CE NZ REMARK 470 GLN B 400 CG CD OE1 NE2 REMARK 470 THR B 402 OG1 CG2 REMARK 470 LYS B 409 CE NZ REMARK 470 LYS B 413 CG CD CE NZ REMARK 470 ARG B 425 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 426 CG CD OE1 OE2 REMARK 470 SER B 427 OG REMARK 470 LYS B 429 CE NZ REMARK 470 LYS B 441 CG CD CE NZ REMARK 470 ILE B 445 CG1 CG2 CD1 REMARK 470 HIS B 456 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 463 CG OD1 ND2 REMARK 470 LYS B 468 NZ REMARK 470 LYS B 489 NZ REMARK 470 LYS B 493 CG CD CE NZ REMARK 470 LYS B 499 CG CD CE NZ REMARK 470 LYS B 506 CE NZ REMARK 470 LYS B 507 CG CD CE NZ REMARK 470 VAL B 508 CG1 CG2 REMARK 470 LYS B 510 CG CD CE NZ REMARK 470 GLU B 512 CG CD OE1 OE2 REMARK 470 ILE B 540 CG1 CG2 CD1 REMARK 470 ASN B 542 CG OD1 ND2 REMARK 470 ASP B 549 CG OD1 OD2 REMARK 470 SER B 550 OG REMARK 470 SER B 551 OG REMARK 470 SER B 559 OG REMARK 470 LEU B 560 CG CD1 CD2 REMARK 470 SER B 562 OG REMARK 470 ASP B 563 CG OD1 OD2 REMARK 470 THR B 564 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 315 137.80 -170.40 REMARK 500 TRP A 351 125.97 -39.99 REMARK 500 SER A 353 -159.21 -123.91 REMARK 500 ASN A 361 48.34 -107.35 REMARK 500 HIS A 456 -6.05 -141.01 REMARK 500 ASP A 480 -52.48 148.50 REMARK 500 ILE A 488 146.40 -172.00 REMARK 500 LYS A 506 -70.07 -72.21 REMARK 500 GLU A 512 141.79 -172.84 REMARK 500 HIS B 318 -74.45 -77.34 REMARK 500 ASN B 338 37.51 70.59 REMARK 500 ASN B 361 54.28 -101.79 REMARK 500 ASN B 382 -161.59 -111.96 REMARK 500 HIS B 403 72.91 61.05 REMARK 500 GLU B 426 143.14 -176.66 REMARK 500 ALA B 442 143.85 -173.51 REMARK 500 PRO B 443 -146.56 -71.79 REMARK 500 TRP B 517 -168.12 -174.53 REMARK 500 THR B 574 -161.08 -109.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 589 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 589 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 590 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3L5H RELATED DB: PDB REMARK 900 RELATED ID: 3L5I RELATED DB: PDB DBREF 3L5J A 301 588 UNP P40189 IL6RB_HUMAN 323 610 DBREF 3L5J B 301 588 UNP P40189 IL6RB_HUMAN 323 610 SEQRES 1 A 288 GLU ASP ARG PRO SER LYS ALA PRO SER PHE TRP TYR LYS SEQRES 2 A 288 ILE ASP PRO SER HIS THR GLN GLY TYR ARG THR VAL GLN SEQRES 3 A 288 LEU VAL TRP LYS THR LEU PRO PRO PHE GLU ALA ASN GLY SEQRES 4 A 288 LYS ILE LEU ASP TYR GLU VAL THR LEU THR ARG TRP LYS SEQRES 5 A 288 SER HIS LEU GLN ASN TYR THR VAL ASN ALA THR LYS LEU SEQRES 6 A 288 THR VAL ASN LEU THR ASN ASP ARG TYR LEU ALA THR LEU SEQRES 7 A 288 THR VAL ARG ASN LEU VAL GLY LYS SER ASP ALA ALA VAL SEQRES 8 A 288 LEU THR ILE PRO ALA CYS ASP PHE GLN ALA THR HIS PRO SEQRES 9 A 288 VAL MET ASP LEU LYS ALA PHE PRO LYS ASP ASN MET LEU SEQRES 10 A 288 TRP VAL GLU TRP THR THR PRO ARG GLU SER VAL LYS LYS SEQRES 11 A 288 TYR ILE LEU GLU TRP CYS VAL LEU SER ASP LYS ALA PRO SEQRES 12 A 288 CYS ILE THR ASP TRP GLN GLN GLU ASP GLY THR VAL HIS SEQRES 13 A 288 ARG THR TYR LEU ARG GLY ASN LEU ALA GLU SER LYS CYS SEQRES 14 A 288 TYR LEU ILE THR VAL THR PRO VAL TYR ALA ASP GLY PRO SEQRES 15 A 288 GLY SER PRO GLU SER ILE LYS ALA TYR LEU LYS GLN ALA SEQRES 16 A 288 PRO PRO SER LYS GLY PRO THR VAL ARG THR LYS LYS VAL SEQRES 17 A 288 GLY LYS ASN GLU ALA VAL LEU GLU TRP ASP GLN LEU PRO SEQRES 18 A 288 VAL ASP VAL GLN ASN GLY PHE ILE ARG ASN TYR THR ILE SEQRES 19 A 288 PHE TYR ARG THR ILE ILE GLY ASN GLU THR ALA VAL ASN SEQRES 20 A 288 VAL ASP SER SER HIS THR GLU TYR THR LEU SER SER LEU SEQRES 21 A 288 THR SER ASP THR LEU TYR MET VAL ARG MET ALA ALA TYR SEQRES 22 A 288 THR ASP GLU GLY GLY LYS ASP GLY PRO GLU PHE THR PHE SEQRES 23 A 288 THR THR SEQRES 1 B 288 GLU ASP ARG PRO SER LYS ALA PRO SER PHE TRP TYR LYS SEQRES 2 B 288 ILE ASP PRO SER HIS THR GLN GLY TYR ARG THR VAL GLN SEQRES 3 B 288 LEU VAL TRP LYS THR LEU PRO PRO PHE GLU ALA ASN GLY SEQRES 4 B 288 LYS ILE LEU ASP TYR GLU VAL THR LEU THR ARG TRP LYS SEQRES 5 B 288 SER HIS LEU GLN ASN TYR THR VAL ASN ALA THR LYS LEU SEQRES 6 B 288 THR VAL ASN LEU THR ASN ASP ARG TYR LEU ALA THR LEU SEQRES 7 B 288 THR VAL ARG ASN LEU VAL GLY LYS SER ASP ALA ALA VAL SEQRES 8 B 288 LEU THR ILE PRO ALA CYS ASP PHE GLN ALA THR HIS PRO SEQRES 9 B 288 VAL MET ASP LEU LYS ALA PHE PRO LYS ASP ASN MET LEU SEQRES 10 B 288 TRP VAL GLU TRP THR THR PRO ARG GLU SER VAL LYS LYS SEQRES 11 B 288 TYR ILE LEU GLU TRP CYS VAL LEU SER ASP LYS ALA PRO SEQRES 12 B 288 CYS ILE THR ASP TRP GLN GLN GLU ASP GLY THR VAL HIS SEQRES 13 B 288 ARG THR TYR LEU ARG GLY ASN LEU ALA GLU SER LYS CYS SEQRES 14 B 288 TYR LEU ILE THR VAL THR PRO VAL TYR ALA ASP GLY PRO SEQRES 15 B 288 GLY SER PRO GLU SER ILE LYS ALA TYR LEU LYS GLN ALA SEQRES 16 B 288 PRO PRO SER LYS GLY PRO THR VAL ARG THR LYS LYS VAL SEQRES 17 B 288 GLY LYS ASN GLU ALA VAL LEU GLU TRP ASP GLN LEU PRO SEQRES 18 B 288 VAL ASP VAL GLN ASN GLY PHE ILE ARG ASN TYR THR ILE SEQRES 19 B 288 PHE TYR ARG THR ILE ILE GLY ASN GLU THR ALA VAL ASN SEQRES 20 B 288 VAL ASP SER SER HIS THR GLU TYR THR LEU SER SER LEU SEQRES 21 B 288 THR SER ASP THR LEU TYR MET VAL ARG MET ALA ALA TYR SEQRES 22 B 288 THR ASP GLU GLY GLY LYS ASP GLY PRO GLU PHE THR PHE SEQRES 23 B 288 THR THR HET EDO A 1 4 HET CL A 589 1 HET CL B 1 1 HET CL B 589 1 HET CL B 590 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 CL 4(CL 1-) FORMUL 8 HOH *15(H2 O) HELIX 1 1 PRO A 333 ASN A 338 1 6 HELIX 2 2 PRO A 521 ASN A 526 1 6 HELIX 3 3 PRO B 333 ASN B 338 1 6 HELIX 4 4 PRO B 521 ASN B 526 1 6 SHEET 1 A 3 PHE A 310 ASP A 315 0 SHEET 2 A 3 ARG A 323 TRP A 329 -1 O GLN A 326 N LYS A 313 SHEET 3 A 3 LYS A 364 LEU A 369 -1 O LEU A 369 N ARG A 323 SHEET 1 B 4 LEU A 355 VAL A 360 0 SHEET 2 B 4 ASP A 343 ARG A 350 -1 N VAL A 346 O TYR A 358 SHEET 3 B 4 TYR A 374 ARG A 381 -1 O ARG A 381 N ASP A 343 SHEET 4 B 4 ALA A 390 ILE A 394 -1 O ILE A 394 N TYR A 374 SHEET 1 C 3 MET A 406 LYS A 413 0 SHEET 2 C 3 MET A 416 THR A 422 -1 O THR A 422 N MET A 406 SHEET 3 C 3 ARG A 457 TYR A 459 -1 O THR A 458 N VAL A 419 SHEET 1 D 4 ASP A 447 ASP A 452 0 SHEET 2 D 4 LYS A 430 VAL A 437 -1 N TRP A 435 O ASP A 447 SHEET 3 D 4 CYS A 469 TYR A 478 -1 O LEU A 471 N CYS A 436 SHEET 4 D 4 GLY A 481 PRO A 482 -1 O GLY A 481 N TYR A 478 SHEET 1 E 4 ASP A 447 ASP A 452 0 SHEET 2 E 4 LYS A 430 VAL A 437 -1 N TRP A 435 O ASP A 447 SHEET 3 E 4 CYS A 469 TYR A 478 -1 O LEU A 471 N CYS A 436 SHEET 4 E 4 GLU A 486 TYR A 491 -1 O ILE A 488 N ILE A 472 SHEET 1 F 3 ARG A 504 LYS A 507 0 SHEET 2 F 3 ALA A 513 GLU A 516 -1 O GLU A 516 N ARG A 504 SHEET 3 F 3 GLU A 554 LEU A 557 -1 O TYR A 555 N LEU A 515 SHEET 1 G 4 THR A 544 ASP A 549 0 SHEET 2 G 4 ASN A 531 THR A 538 -1 N TYR A 536 O THR A 544 SHEET 3 G 4 LEU A 565 THR A 574 -1 O ARG A 569 N PHE A 535 SHEET 4 G 4 GLY A 577 ASP A 580 -1 O GLY A 577 N THR A 574 SHEET 1 H 4 THR A 544 ASP A 549 0 SHEET 2 H 4 ASN A 531 THR A 538 -1 N TYR A 536 O THR A 544 SHEET 3 H 4 LEU A 565 THR A 574 -1 O ARG A 569 N PHE A 535 SHEET 4 H 4 PHE A 584 THR A 587 -1 O PHE A 584 N VAL A 568 SHEET 1 I 3 PHE B 310 LYS B 313 0 SHEET 2 I 3 TYR B 322 TRP B 329 -1 O VAL B 328 N TRP B 311 SHEET 3 I 3 LYS B 364 THR B 370 -1 O LEU B 365 N LEU B 327 SHEET 1 J 4 LEU B 355 VAL B 360 0 SHEET 2 J 4 ASP B 343 ARG B 350 -1 N LEU B 348 O GLN B 356 SHEET 3 J 4 TYR B 374 ARG B 381 -1 O ARG B 381 N ASP B 343 SHEET 4 J 4 ALA B 390 ILE B 394 -1 O LEU B 392 N ALA B 376 SHEET 1 K 3 MET B 406 LYS B 413 0 SHEET 2 K 3 MET B 416 THR B 422 -1 O THR B 422 N MET B 406 SHEET 3 K 3 ARG B 457 TYR B 459 -1 O THR B 458 N VAL B 419 SHEET 1 L 4 ASP B 447 ASP B 452 0 SHEET 2 L 4 LYS B 430 VAL B 437 -1 N TYR B 431 O GLU B 451 SHEET 3 L 4 CYS B 469 VAL B 477 -1 O LEU B 471 N CYS B 436 SHEET 4 L 4 GLU B 486 TYR B 491 -1 O ALA B 490 N TYR B 470 SHEET 1 M 3 ARG B 504 VAL B 508 0 SHEET 2 M 3 ALA B 513 GLU B 516 -1 O VAL B 514 N LYS B 507 SHEET 3 M 3 GLU B 554 LEU B 557 -1 O LEU B 557 N ALA B 513 SHEET 1 N 4 THR B 544 VAL B 548 0 SHEET 2 N 4 ASN B 531 ARG B 537 -1 N ILE B 534 O VAL B 546 SHEET 3 N 4 LEU B 565 TYR B 573 -1 O ARG B 569 N PHE B 535 SHEET 4 N 4 GLY B 578 ASP B 580 -1 O LYS B 579 N ALA B 572 SHEET 1 O 4 THR B 544 VAL B 548 0 SHEET 2 O 4 ASN B 531 ARG B 537 -1 N ILE B 534 O VAL B 546 SHEET 3 O 4 LEU B 565 TYR B 573 -1 O ARG B 569 N PHE B 535 SHEET 4 O 4 PHE B 584 THR B 587 -1 O PHE B 584 N VAL B 568 SSBOND 1 CYS A 397 CYS B 397 1555 1555 2.03 SSBOND 2 CYS A 436 CYS A 444 1555 1555 2.03 SSBOND 3 CYS B 436 CYS B 444 1555 1555 2.03 SITE 1 AC1 7 ALA A 401 THR A 402 TYR A 478 ASP A 480 SITE 2 AC1 7 GLY A 481 PRO A 482 GLY A 483 SITE 1 AC2 3 SER A 309 GLN A 450 ARG A 461 SITE 1 AC3 5 SER B 309 LYS B 330 GLN B 449 GLN B 450 SITE 2 AC3 5 ARG B 461 SITE 1 AC4 3 LYS B 352 TYR B 491 GLN B 494 SITE 1 AC5 2 ARG B 537 ARG B 569 CRYST1 102.936 89.221 106.877 90.00 117.72 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009715 0.000000 0.005104 0.00000 SCALE2 0.000000 0.011208 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010569 0.00000