PDB Short entry for 3LRB HEADER TRANSPORT PROTEIN 10-FEB-10 3LRB TITLE STRUCTURE OF E. COLI ADIC COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININE/AGMATINE ANTIPORTER; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 STRAIN: O157:H7; SOURCE 5 GENE: ADIC, Z5717, ECS5097; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS TRANSPORTER, ANTIPORTER, ADIC, AMINO-ACID TRANSPORT, ANTIPORT, CELL KEYWDS 2 INNER MEMBRANE, CELL MEMBRANE, MEMBRANE, TRANSMEMBRANE, TRANSPORT, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.GAO,F.LU,L.ZHOU,Y.SHI REVDAT 2 20-MAR-24 3LRB 1 REMARK REVDAT 1 23-FEB-10 3LRB 0 SPRSDE 23-FEB-10 3LRB 3H5M JRNL AUTH X.GAO,F.LU,L.ZHOU,S.DANG,L.SUN,X.LI,J.WANG,Y.SHI JRNL TITL STRUCTURE AND MECHANISM OF AN AMINO ACID ANTIPORTER JRNL REF SCIENCE V. 324 1565 2009 JRNL REFN ISSN 0036-8075 JRNL PMID 19478139 JRNL DOI 10.1126/SCIENCE.1173654 REMARK 2 REMARK 2 RESOLUTION. 3.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 16519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.297 REMARK 3 R VALUE (WORKING SET) : 0.295 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.280 REMARK 3 FREE R VALUE TEST SET COUNT : 873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3274 - 6.5501 0.99 2753 127 0.2618 0.2218 REMARK 3 2 6.5501 - 5.2008 1.00 2570 201 0.3082 0.4078 REMARK 3 3 5.2008 - 4.5439 1.00 2769 0 0.2363 0.0000 REMARK 3 4 4.5439 - 4.1287 1.00 2446 266 0.2577 0.3094 REMARK 3 5 4.1287 - 3.8329 1.00 2697 0 0.3127 0.0000 REMARK 3 6 3.8329 - 3.6070 0.99 2411 279 0.3960 0.4191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.27 REMARK 3 B_SOL : 150.0 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.580 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 152.3 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 188.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 24.76700 REMARK 3 B22 (A**2) : 14.20500 REMARK 3 B33 (A**2) : -38.97200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.031 6508 REMARK 3 ANGLE : 1.857 8806 REMARK 3 CHIRALITY : 0.099 1036 REMARK 3 PLANARITY : 0.011 1028 REMARK 3 DIHEDRAL : 24.565 3670 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 86.2702 60.4805 -1.3537 REMARK 3 T TENSOR REMARK 3 T11: 1.2827 T22: 1.2452 REMARK 3 T33: 1.2984 T12: -0.1804 REMARK 3 T13: -0.0841 T23: -0.0928 REMARK 3 L TENSOR REMARK 3 L11: 1.8855 L22: -1.2986 REMARK 3 L33: 1.9485 L12: 0.1386 REMARK 3 L13: -0.4433 L23: -0.2970 REMARK 3 S TENSOR REMARK 3 S11: -0.1920 S12: -0.0430 S13: -0.5668 REMARK 3 S21: 0.0708 S22: -0.2510 S23: 0.0585 REMARK 3 S31: 0.4631 S32: 0.4297 S33: 0.2981 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 56.8892 42.3946 20.3353 REMARK 3 T TENSOR REMARK 3 T11: 1.1683 T22: 1.1479 REMARK 3 T33: 1.2840 T12: -0.2220 REMARK 3 T13: -0.1383 T23: -0.1050 REMARK 3 L TENSOR REMARK 3 L11: 0.4676 L22: 0.4562 REMARK 3 L33: 1.0224 L12: -0.6706 REMARK 3 L13: -0.7050 L23: 0.2419 REMARK 3 S TENSOR REMARK 3 S11: -0.1719 S12: 0.0972 S13: -0.7172 REMARK 3 S21: 0.1758 S22: -0.1683 S23: -0.3264 REMARK 3 S31: 0.4933 S32: -0.2952 S33: 0.2673 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 6:252 OR RESSEQ REMARK 3 273:435 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 6:252 OR RESSEQ REMARK 3 273:435 ) REMARK 3 ATOM PAIRS NUMBER : 3036 REMARK 3 RMSD : 0.033 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LRB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057632. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16598 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.610 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.46300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4% NG, 0.1MM TRIS, 22% (W/V) PEG REMARK 280 400, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K , REMARK 280 TEMPERATURE 291.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.40500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.05500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.15000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.05500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.40500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.15000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 253 REMARK 465 ALA A 254 REMARK 465 LEU A 255 REMARK 465 ARG A 256 REMARK 465 VAL A 257 REMARK 465 SER A 258 REMARK 465 ALA A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 PHE A 262 REMARK 465 GLY A 263 REMARK 465 ASP A 264 REMARK 465 ALA A 265 REMARK 465 ALA A 266 REMARK 465 ARG A 267 REMARK 465 MET A 268 REMARK 465 ALA A 269 REMARK 465 LEU A 270 REMARK 465 GLY A 271 REMARK 465 ASP A 272 REMARK 465 TYR A 436 REMARK 465 PRO A 437 REMARK 465 LEU A 438 REMARK 465 ASP A 439 REMARK 465 ALA A 440 REMARK 465 PRO A 441 REMARK 465 ILE A 442 REMARK 465 SER A 443 REMARK 465 LYS A 444 REMARK 465 ASP A 445 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 ASP B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 253 REMARK 465 ALA B 254 REMARK 465 LEU B 255 REMARK 465 ARG B 256 REMARK 465 VAL B 257 REMARK 465 SER B 258 REMARK 465 ALA B 259 REMARK 465 SER B 260 REMARK 465 PRO B 261 REMARK 465 PHE B 262 REMARK 465 GLY B 263 REMARK 465 ASP B 264 REMARK 465 ALA B 265 REMARK 465 ALA B 266 REMARK 465 ARG B 267 REMARK 465 MET B 268 REMARK 465 ALA B 269 REMARK 465 LEU B 270 REMARK 465 GLY B 271 REMARK 465 ASP B 272 REMARK 465 TYR B 436 REMARK 465 PRO B 437 REMARK 465 LEU B 438 REMARK 465 ASP B 439 REMARK 465 ALA B 440 REMARK 465 PRO B 441 REMARK 465 ILE B 442 REMARK 465 SER B 443 REMARK 465 LYS B 444 REMARK 465 ASP B 445 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 431 CG CD1 CD2 REMARK 470 HIS A 432 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 ASN A 434 CG OD1 ND2 REMARK 470 LEU B 431 CG CD1 CD2 REMARK 470 HIS B 432 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 433 CG CD CE NZ REMARK 470 ASN B 434 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 90 O THR B 300 2.08 REMARK 500 OD1 ASN A 90 O THR A 300 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 117 C - N - CA ANGL. DEV. = -10.1 DEGREES REMARK 500 PRO A 312 C - N - CA ANGL. DEV. = 13.3 DEGREES REMARK 500 PRO A 312 C - N - CD ANGL. DEV. = -21.6 DEGREES REMARK 500 PRO B 117 C - N - CA ANGL. DEV. = -10.1 DEGREES REMARK 500 PRO B 312 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO B 312 C - N - CD ANGL. DEV. = -20.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 7 -12.91 -154.07 REMARK 500 VAL A 10 -149.04 85.48 REMARK 500 MET A 24 -70.65 -48.58 REMARK 500 PHE A 29 55.10 -67.55 REMARK 500 LEU A 30 -25.15 -173.62 REMARK 500 THR A 38 -157.53 -77.31 REMARK 500 ILE A 41 84.23 45.57 REMARK 500 LEU A 66 -63.40 -96.66 REMARK 500 SER A 69 -61.83 -158.75 REMARK 500 SER A 73 0.19 55.68 REMARK 500 PHE A 81 -80.85 -151.54 REMARK 500 PRO A 83 -121.39 -36.56 REMARK 500 PHE A 84 -51.79 -24.08 REMARK 500 LEU A 95 26.18 -62.34 REMARK 500 ALA A 96 -4.51 -165.60 REMARK 500 PHE A 115 98.12 79.37 REMARK 500 PHE A 116 -172.04 47.26 REMARK 500 PRO A 117 -115.99 22.91 REMARK 500 ILE A 118 105.67 37.98 REMARK 500 LEU A 119 -155.32 39.45 REMARK 500 LYS A 120 55.14 77.61 REMARK 500 ASP A 121 -57.84 -150.63 REMARK 500 PRO A 122 -140.05 -66.94 REMARK 500 LEU A 123 1.67 -65.44 REMARK 500 LYS A 145 -19.11 -49.43 REMARK 500 VAL A 167 -56.64 -132.78 REMARK 500 TRP A 172 -125.09 -78.65 REMARK 500 PHE A 173 135.34 -39.73 REMARK 500 ARG A 174 86.27 73.14 REMARK 500 TRP A 182 -154.63 14.86 REMARK 500 ASN A 183 -118.94 -73.51 REMARK 500 VAL A 184 -174.60 44.81 REMARK 500 SER A 185 -39.22 77.76 REMARK 500 PHE A 190 101.85 -50.39 REMARK 500 VAL A 199 -43.48 -142.92 REMARK 500 TRP A 202 8.56 -63.38 REMARK 500 PHE A 204 0.24 -152.25 REMARK 500 VAL A 207 -15.69 -49.49 REMARK 500 ALA A 214 -91.44 59.38 REMARK 500 VAL A 216 39.12 -97.79 REMARK 500 LYS A 218 -86.57 -47.55 REMARK 500 ARG A 222 -51.13 -124.75 REMARK 500 MET A 249 153.44 -43.49 REMARK 500 ILE A 250 -42.46 -145.17 REMARK 500 CYS A 281 -0.01 -57.10 REMARK 500 SER A 289 -74.54 -45.79 REMARK 500 THR A 300 44.16 -70.96 REMARK 500 ALA A 301 -58.02 -161.67 REMARK 500 ALA A 303 -84.39 -66.65 REMARK 500 ALA A 304 -19.05 -40.47 REMARK 500 REMARK 500 THIS ENTRY HAS 180 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 116 PRO A 117 -144.47 REMARK 500 HIS A 377 GLY A 378 146.64 REMARK 500 TYR A 424 ALA A 425 146.85 REMARK 500 PHE B 116 PRO B 117 -144.14 REMARK 500 HIS B 377 GLY B 378 147.31 REMARK 500 TYR B 424 ALA B 425 146.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LRC RELATED DB: PDB DBREF 3LRB A 1 445 UNP P60063 ADIC_ECO57 1 445 DBREF 3LRB B 1 445 UNP P60063 ADIC_ECO57 1 445 SEQRES 1 A 445 MET SER SER ASP ALA ASP ALA HIS LYS VAL GLY LEU ILE SEQRES 2 A 445 PRO VAL THR LEU MET VAL SER GLY ASN ILE MET GLY SER SEQRES 3 A 445 GLY VAL PHE LEU LEU PRO ALA ASN LEU ALA SER THR GLY SEQRES 4 A 445 GLY ILE ALA ILE TYR GLY TRP LEU VAL THR ILE ILE GLY SEQRES 5 A 445 ALA LEU GLY LEU SER MET VAL TYR ALA LYS MET SER PHE SEQRES 6 A 445 LEU ASP PRO SER PRO GLY GLY SER TYR ALA TYR ALA ARG SEQRES 7 A 445 ARG CYS PHE GLY PRO PHE LEU GLY TYR GLN THR ASN VAL SEQRES 8 A 445 LEU TYR TRP LEU ALA CYS TRP ILE GLY ASN ILE ALA MET SEQRES 9 A 445 VAL VAL ILE GLY VAL GLY TYR LEU SER TYR PHE PHE PRO SEQRES 10 A 445 ILE LEU LYS ASP PRO LEU VAL LEU THR ILE THR CYS VAL SEQRES 11 A 445 VAL VAL LEU TRP ILE PHE VAL LEU LEU ASN ILE VAL GLY SEQRES 12 A 445 PRO LYS MET ILE THR ARG VAL GLN ALA VAL ALA THR VAL SEQRES 13 A 445 LEU ALA LEU ILE PRO ILE VAL GLY ILE ALA VAL PHE GLY SEQRES 14 A 445 TRP PHE TRP PHE ARG GLY GLU THR TYR MET ALA ALA TRP SEQRES 15 A 445 ASN VAL SER GLY LEU GLY THR PHE GLY ALA ILE GLN SER SEQRES 16 A 445 THR LEU ASN VAL THR LEU TRP SER PHE ILE GLY VAL GLU SEQRES 17 A 445 SER ALA SER VAL ALA ALA GLY VAL VAL LYS ASN PRO LYS SEQRES 18 A 445 ARG ASN VAL PRO ILE ALA THR ILE GLY GLY VAL LEU ILE SEQRES 19 A 445 ALA ALA VAL CYS TYR VAL LEU SER THR THR ALA ILE MET SEQRES 20 A 445 GLY MET ILE PRO ASN ALA ALA LEU ARG VAL SER ALA SER SEQRES 21 A 445 PRO PHE GLY ASP ALA ALA ARG MET ALA LEU GLY ASP THR SEQRES 22 A 445 ALA GLY ALA ILE VAL SER PHE CYS ALA ALA ALA GLY CYS SEQRES 23 A 445 LEU GLY SER LEU GLY GLY TRP THR LEU LEU ALA GLY GLN SEQRES 24 A 445 THR ALA LYS ALA ALA ALA ASP ASP GLY LEU PHE PRO PRO SEQRES 25 A 445 ILE PHE ALA ARG VAL ASN LYS ALA GLY THR PRO VAL ALA SEQRES 26 A 445 GLY LEU ILE ILE VAL GLY ILE LEU MET THR ILE PHE GLN SEQRES 27 A 445 LEU SER SER ILE SER PRO ASN ALA THR LYS GLU PHE GLY SEQRES 28 A 445 LEU VAL SER SER VAL SER VAL ILE PHE THR LEU VAL PRO SEQRES 29 A 445 TYR LEU TYR THR CYS ALA ALA LEU LEU LEU LEU GLY HIS SEQRES 30 A 445 GLY HIS PHE GLY LYS ALA ARG PRO ALA TYR LEU ALA VAL SEQRES 31 A 445 THR THR ILE ALA PHE LEU TYR CYS ILE TRP ALA VAL VAL SEQRES 32 A 445 GLY SER GLY ALA LYS GLU VAL MET TRP SER PHE VAL THR SEQRES 33 A 445 LEU MET VAL ILE THR ALA MET TYR ALA LEU ASN TYR ASN SEQRES 34 A 445 ARG LEU HIS LYS ASN PRO TYR PRO LEU ASP ALA PRO ILE SEQRES 35 A 445 SER LYS ASP SEQRES 1 B 445 MET SER SER ASP ALA ASP ALA HIS LYS VAL GLY LEU ILE SEQRES 2 B 445 PRO VAL THR LEU MET VAL SER GLY ASN ILE MET GLY SER SEQRES 3 B 445 GLY VAL PHE LEU LEU PRO ALA ASN LEU ALA SER THR GLY SEQRES 4 B 445 GLY ILE ALA ILE TYR GLY TRP LEU VAL THR ILE ILE GLY SEQRES 5 B 445 ALA LEU GLY LEU SER MET VAL TYR ALA LYS MET SER PHE SEQRES 6 B 445 LEU ASP PRO SER PRO GLY GLY SER TYR ALA TYR ALA ARG SEQRES 7 B 445 ARG CYS PHE GLY PRO PHE LEU GLY TYR GLN THR ASN VAL SEQRES 8 B 445 LEU TYR TRP LEU ALA CYS TRP ILE GLY ASN ILE ALA MET SEQRES 9 B 445 VAL VAL ILE GLY VAL GLY TYR LEU SER TYR PHE PHE PRO SEQRES 10 B 445 ILE LEU LYS ASP PRO LEU VAL LEU THR ILE THR CYS VAL SEQRES 11 B 445 VAL VAL LEU TRP ILE PHE VAL LEU LEU ASN ILE VAL GLY SEQRES 12 B 445 PRO LYS MET ILE THR ARG VAL GLN ALA VAL ALA THR VAL SEQRES 13 B 445 LEU ALA LEU ILE PRO ILE VAL GLY ILE ALA VAL PHE GLY SEQRES 14 B 445 TRP PHE TRP PHE ARG GLY GLU THR TYR MET ALA ALA TRP SEQRES 15 B 445 ASN VAL SER GLY LEU GLY THR PHE GLY ALA ILE GLN SER SEQRES 16 B 445 THR LEU ASN VAL THR LEU TRP SER PHE ILE GLY VAL GLU SEQRES 17 B 445 SER ALA SER VAL ALA ALA GLY VAL VAL LYS ASN PRO LYS SEQRES 18 B 445 ARG ASN VAL PRO ILE ALA THR ILE GLY GLY VAL LEU ILE SEQRES 19 B 445 ALA ALA VAL CYS TYR VAL LEU SER THR THR ALA ILE MET SEQRES 20 B 445 GLY MET ILE PRO ASN ALA ALA LEU ARG VAL SER ALA SER SEQRES 21 B 445 PRO PHE GLY ASP ALA ALA ARG MET ALA LEU GLY ASP THR SEQRES 22 B 445 ALA GLY ALA ILE VAL SER PHE CYS ALA ALA ALA GLY CYS SEQRES 23 B 445 LEU GLY SER LEU GLY GLY TRP THR LEU LEU ALA GLY GLN SEQRES 24 B 445 THR ALA LYS ALA ALA ALA ASP ASP GLY LEU PHE PRO PRO SEQRES 25 B 445 ILE PHE ALA ARG VAL ASN LYS ALA GLY THR PRO VAL ALA SEQRES 26 B 445 GLY LEU ILE ILE VAL GLY ILE LEU MET THR ILE PHE GLN SEQRES 27 B 445 LEU SER SER ILE SER PRO ASN ALA THR LYS GLU PHE GLY SEQRES 28 B 445 LEU VAL SER SER VAL SER VAL ILE PHE THR LEU VAL PRO SEQRES 29 B 445 TYR LEU TYR THR CYS ALA ALA LEU LEU LEU LEU GLY HIS SEQRES 30 B 445 GLY HIS PHE GLY LYS ALA ARG PRO ALA TYR LEU ALA VAL SEQRES 31 B 445 THR THR ILE ALA PHE LEU TYR CYS ILE TRP ALA VAL VAL SEQRES 32 B 445 GLY SER GLY ALA LYS GLU VAL MET TRP SER PHE VAL THR SEQRES 33 B 445 LEU MET VAL ILE THR ALA MET TYR ALA LEU ASN TYR ASN SEQRES 34 B 445 ARG LEU HIS LYS ASN PRO TYR PRO LEU ASP ALA PRO ILE SEQRES 35 B 445 SER LYS ASP HELIX 1 1 GLY A 11 MET A 24 1 14 HELIX 2 2 LEU A 30 LEU A 35 1 6 HELIX 3 3 ILE A 43 SER A 64 1 22 HELIX 4 4 ALA A 75 ARG A 79 5 5 HELIX 5 5 GLY A 82 LEU A 95 1 14 HELIX 6 6 CYS A 97 VAL A 109 1 13 HELIX 7 7 PRO A 122 GLY A 143 1 22 HELIX 8 8 MET A 146 ALA A 166 1 21 HELIX 9 9 VAL A 167 TRP A 172 1 6 HELIX 10 10 GLU A 176 TRP A 182 1 7 HELIX 11 11 GLY A 188 LEU A 197 1 10 HELIX 12 12 GLU A 208 ALA A 214 1 7 HELIX 13 13 GLY A 215 VAL A 217 5 3 HELIX 14 14 ASN A 219 THR A 243 1 25 HELIX 15 15 ALA A 274 ALA A 282 1 9 HELIX 16 16 ALA A 282 ALA A 303 1 22 HELIX 17 17 PRO A 323 LEU A 339 1 17 HELIX 18 18 SER A 355 LEU A 375 1 21 HELIX 19 19 ALA A 386 GLY A 404 1 19 HELIX 20 20 GLY A 406 MET A 423 1 18 HELIX 21 21 GLY B 11 MET B 24 1 14 HELIX 22 22 LEU B 30 LEU B 35 1 6 HELIX 23 23 ILE B 43 SER B 64 1 22 HELIX 24 24 ALA B 75 ARG B 79 5 5 HELIX 25 25 GLY B 82 LEU B 95 1 14 HELIX 26 26 CYS B 97 VAL B 109 1 13 HELIX 27 27 PRO B 122 GLY B 143 1 22 HELIX 28 28 MET B 146 ALA B 166 1 21 HELIX 29 29 VAL B 167 TRP B 172 1 6 HELIX 30 30 GLU B 176 TRP B 182 1 7 HELIX 31 31 GLY B 188 LEU B 197 1 10 HELIX 32 32 GLU B 208 ALA B 214 1 7 HELIX 33 33 GLY B 215 VAL B 217 5 3 HELIX 34 34 ASN B 219 THR B 243 1 25 HELIX 35 35 ALA B 274 ALA B 282 1 9 HELIX 36 36 ALA B 282 ALA B 303 1 22 HELIX 37 37 PRO B 323 LEU B 339 1 17 HELIX 38 38 SER B 355 PHE B 360 1 6 HELIX 39 39 THR B 361 LEU B 375 1 15 HELIX 40 40 ALA B 386 GLY B 404 1 19 HELIX 41 41 GLY B 406 MET B 423 1 18 CISPEP 1 MET A 24 GLY A 25 0 -2.43 CISPEP 2 THR A 38 GLY A 39 0 14.84 CISPEP 3 ILE A 41 ALA A 42 0 -13.17 CISPEP 4 PRO A 68 SER A 69 0 -6.34 CISPEP 5 SER A 69 PRO A 70 0 -12.56 CISPEP 6 GLY A 71 GLY A 72 0 -14.93 CISPEP 7 PHE A 81 GLY A 82 0 8.66 CISPEP 8 ILE A 118 LEU A 119 0 -15.32 CISPEP 9 GLY A 143 PRO A 144 0 3.73 CISPEP 10 PHE A 173 ARG A 174 0 4.37 CISPEP 11 ARG A 174 GLY A 175 0 0.14 CISPEP 12 PHE A 310 PRO A 311 0 3.54 CISPEP 13 PRO A 312 ILE A 313 0 -8.56 CISPEP 14 PHE A 314 ALA A 315 0 -0.76 CISPEP 15 ALA A 315 ARG A 316 0 -15.89 CISPEP 16 ILE A 342 SER A 343 0 5.13 CISPEP 17 MET B 24 GLY B 25 0 -1.22 CISPEP 18 THR B 38 GLY B 39 0 15.20 CISPEP 19 ILE B 41 ALA B 42 0 -12.82 CISPEP 20 PRO B 68 SER B 69 0 -6.04 CISPEP 21 SER B 69 PRO B 70 0 -11.03 CISPEP 22 GLY B 71 GLY B 72 0 -16.21 CISPEP 23 PHE B 81 GLY B 82 0 9.79 CISPEP 24 ILE B 118 LEU B 119 0 -15.50 CISPEP 25 GLY B 143 PRO B 144 0 3.51 CISPEP 26 PHE B 173 ARG B 174 0 4.46 CISPEP 27 ARG B 174 GLY B 175 0 -0.02 CISPEP 28 PHE B 310 PRO B 311 0 3.63 CISPEP 29 PRO B 312 ILE B 313 0 -9.05 CISPEP 30 PHE B 314 ALA B 315 0 -1.35 CISPEP 31 ALA B 315 ARG B 316 0 -15.48 CISPEP 32 ILE B 342 SER B 343 0 4.88 CRYST1 92.810 108.300 138.110 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010775 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009234 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007241 0.00000