PDB Short entry for 3NDF HEADER HYDROLASE INHIBITOR 07-JUN-10 3NDF TITLE CLEAVED ANTITRYPSIN WITH P8-P6 ASP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-1-ANTITRYPSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: P1 CLEAVED ANTITRYPSIN, NTERM, UNP RESIDUES 46-382; COMPND 5 SYNONYM: ALPHA-1 PROTEASE INHIBITOR, ALPHA-1-ANTIPROTEINASE, SERPIN COMPND 6 A1, SHORT PEPTIDE FROM AAT, SPAAT; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: ALPHA-1-ANTITRYPSIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: P1 CLEAVED ANTITRYPSIN, CTERM, UNP RESIDUES 383-418; COMPND 13 SYNONYM: ALPHA-1 PROTEASE INHIBITOR, ALPHA-1-ANTIPROTEINASE, SERPIN COMPND 14 A1, SHORT PEPTIDE FROM AAT, SPAAT; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SERPINA1, AAT, PI, PRO0684, PRO2209; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCEP4; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: SERPINA1, AAT, PI, PRO0684, PRO2209; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ROSETTA DE3; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PCEP4 KEYWDS SERPIN, HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR J.A.HUNTINGTON,T.J.SENDALL,M.YAMASAKI REVDAT 3 01-NOV-23 3NDF 1 SEQADV REVDAT 2 28-JUN-17 3NDF 1 JRNL REVDAT 1 28-JUL-10 3NDF 0 JRNL AUTH M.YAMASAKI,T.J.SENDALL,L.E.HARRIS,G.M.W.LEWIS,J.A.HUNTINGTON JRNL TITL LOOP-SHEET MECHANISM OF SERPIN POLYMERIZATION TESTED BY JRNL TITL 2 REACTIVE CENTER LOOP MUTATIONS JRNL REF J. BIOL. CHEM. V. 285 30752 2010 JRNL REFN ESSN 1083-351X JRNL PMID 20667823 JRNL DOI 10.1074/JBC.M110.156042 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 8867 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 989 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 677 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2828 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.07000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : 0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.34000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.430 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.291 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.082 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.849 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2885 ; 0.003 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3923 ; 0.617 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 368 ; 4.042 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;33.578 ;25.680 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 469 ;12.086 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;10.159 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 462 ; 0.045 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2171 ; 0.002 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1844 ; 0.203 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2960 ; 0.379 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1041 ; 0.372 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 963 ; 0.674 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NDF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : XENOCS FOX2D MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9871 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : 0.04200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.12900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1EZX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12M ALCOHOLS (MORPHEUS), 0.1M BUFFER REMARK 280 1, 13.3% PEG 550MME, 6.6% PEG 20000, 20% GLYCEROL, PH 6.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.63500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 16 REMARK 465 SER A 17 REMARK 465 HIS A 18 REMARK 465 MET A 19 REMARK 465 LEU A 20 REMARK 465 GLU A 21 REMARK 465 THR A 22 REMARK 465 SER B 359 REMARK 465 ILE B 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 23 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 HIS A 43 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 47 OG REMARK 470 GLN A 91 CG CD OE1 NE2 REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 SER A 108 OG REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 GLU A 132 CG CD OE1 OE2 REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 LYS A 136 CD CE NZ REMARK 470 LYS A 163 CD CE NZ REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 ARG A 178 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 193 CD CE NZ REMARK 470 ARG A 196 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 204 CG CD OE1 OE2 REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 GLU A 257 CG CD OE1 OE2 REMARK 470 GLN A 261 CG CD OE1 NE2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 GLU A 277 CG CD OE1 OE2 REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 LYS A 300 CD CE NZ REMARK 470 ASN A 314 CG OD1 ND2 REMARK 470 LYS A 331 CE NZ REMARK 470 LYS A 343 CG CD CE NZ REMARK 470 LYS B 394 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 13 O HOH A 361 2646 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 70 -143.11 57.53 REMARK 500 GLN A 166 62.58 37.89 REMARK 500 ASN A 247 49.01 -92.12 REMARK 500 PHE A 275 -73.44 -56.62 REMARK 500 THR A 309 -40.13 -130.43 REMARK 500 GLN B 393 -25.51 -163.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NDD RELATED DB: PDB REMARK 900 P10 PRO, P9-P6 ASP DBREF 3NDF A 22 358 UNP P01009 A1AT_HUMAN 46 382 DBREF 3NDF B 359 394 UNP P01009 A1AT_HUMAN 383 418 SEQADV 3NDF GLY A 16 UNP P01009 EXPRESSION TAG SEQADV 3NDF SER A 17 UNP P01009 EXPRESSION TAG SEQADV 3NDF HIS A 18 UNP P01009 EXPRESSION TAG SEQADV 3NDF MET A 19 UNP P01009 EXPRESSION TAG SEQADV 3NDF LEU A 20 UNP P01009 EXPRESSION TAG SEQADV 3NDF GLU A 21 UNP P01009 EXPRESSION TAG SEQADV 3NDF ALA A 232 UNP P01009 CYS 256 ENGINEERED MUTATION SEQADV 3NDF ASP A 351 UNP P01009 MET 375 ENGINEERED MUTATION SEQADV 3NDF ASP A 352 UNP P01009 PHE 376 ENGINEERED MUTATION SEQADV 3NDF ASP A 353 UNP P01009 LEU 377 ENGINEERED MUTATION SEQADV 3NDF ARG A 358 UNP P01009 MET 382 ENGINEERED MUTATION SEQRES 1 A 343 GLY SER HIS MET LEU GLU THR PHE ASN LYS ILE THR PRO SEQRES 2 A 343 ASN LEU ALA GLU PHE ALA PHE SER LEU TYR ARG GLN LEU SEQRES 3 A 343 ALA HIS GLN SER ASN SER THR ASN ILE PHE PHE SER PRO SEQRES 4 A 343 VAL SER ILE ALA THR ALA PHE ALA MET LEU SER LEU GLY SEQRES 5 A 343 THR LYS ALA ASP THR HIS ASP GLU ILE LEU GLU GLY LEU SEQRES 6 A 343 ASN PHE ASN LEU THR GLU ILE PRO GLU ALA GLN ILE HIS SEQRES 7 A 343 GLU GLY PHE GLN GLU LEU LEU ARG THR LEU ASN GLN PRO SEQRES 8 A 343 ASP SER GLN LEU GLN LEU THR THR GLY ASN GLY LEU PHE SEQRES 9 A 343 LEU SER GLU GLY LEU LYS LEU VAL ASP LYS PHE LEU GLU SEQRES 10 A 343 ASP VAL LYS LYS LEU TYR HIS SER GLU ALA PHE THR VAL SEQRES 11 A 343 ASN PHE GLY ASP THR GLU GLU ALA LYS LYS GLN ILE ASN SEQRES 12 A 343 ASP TYR VAL GLU LYS GLY THR GLN GLY LYS ILE VAL ASP SEQRES 13 A 343 LEU VAL LYS GLU LEU ASP ARG ASP THR VAL PHE ALA LEU SEQRES 14 A 343 VAL ASN TYR ILE PHE PHE LYS GLY LYS TRP GLU ARG PRO SEQRES 15 A 343 PHE GLU VAL LYS ASP THR GLU GLU GLU ASP PHE HIS VAL SEQRES 16 A 343 ASP GLN VAL THR THR VAL LYS VAL PRO MET MET LYS ARG SEQRES 17 A 343 LEU GLY MET PHE ASN ILE GLN HIS ALA LYS LYS LEU SER SEQRES 18 A 343 SER TRP VAL LEU LEU MET LYS TYR LEU GLY ASN ALA THR SEQRES 19 A 343 ALA ILE PHE PHE LEU PRO ASP GLU GLY LYS LEU GLN HIS SEQRES 20 A 343 LEU GLU ASN GLU LEU THR HIS ASP ILE ILE THR LYS PHE SEQRES 21 A 343 LEU GLU ASN GLU ASP ARG ARG SER ALA SER LEU HIS LEU SEQRES 22 A 343 PRO LYS LEU SER ILE THR GLY THR TYR ASP LEU LYS SER SEQRES 23 A 343 VAL LEU GLY GLN LEU GLY ILE THR LYS VAL PHE SER ASN SEQRES 24 A 343 GLY ALA ASP LEU SER GLY VAL THR GLU GLU ALA PRO LEU SEQRES 25 A 343 LYS LEU SER LYS ALA VAL HIS LYS ALA VAL LEU THR ILE SEQRES 26 A 343 ASP GLU LYS GLY THR GLU ALA ALA GLY ALA ASP ASP ASP SEQRES 27 A 343 GLU ALA ILE PRO ARG SEQRES 1 B 36 SER ILE PRO PRO GLU VAL LYS PHE ASN LYS PRO PHE VAL SEQRES 2 B 36 PHE LEU MET ILE GLU GLN ASN THR LYS SER PRO LEU PHE SEQRES 3 B 36 MET GLY LYS VAL VAL ASN PRO THR GLN LYS FORMUL 3 HOH *22(H2 O) HELIX 1 1 ILE A 26 SER A 45 1 20 HELIX 2 2 SER A 53 LEU A 66 1 14 HELIX 3 3 LYS A 69 LEU A 80 1 12 HELIX 4 4 PRO A 88 ASN A 104 1 17 HELIX 5 5 VAL A 127 HIS A 139 1 13 HELIX 6 6 ASP A 149 THR A 165 1 17 HELIX 7 7 GLU A 199 THR A 203 5 5 HELIX 8 8 LYS A 233 LEU A 235 5 3 HELIX 9 9 LYS A 259 LEU A 267 1 9 HELIX 10 10 THR A 268 GLU A 277 1 10 HELIX 11 11 LEU A 299 GLY A 307 1 9 HELIX 12 12 THR A 309 SER A 313 5 5 SHEET 1 A 7 ILE A 50 PHE A 52 0 SHEET 2 A 7 PRO B 382 VAL B 388 -1 O LYS B 387 N ILE A 50 SHEET 3 A 7 PHE B 370 GLU B 376 -1 N MET B 374 O PHE B 384 SHEET 4 A 7 ALA A 248 PRO A 255 -1 N THR A 249 O ILE B 375 SHEET 5 A 7 SER A 237 LYS A 243 -1 N MET A 242 O ALA A 250 SHEET 6 A 7 THR A 214 ALA A 232 -1 N GLN A 230 O VAL A 239 SHEET 7 A 7 GLU A 204 ASP A 211 -1 N PHE A 208 O VAL A 216 SHEET 1 B 8 ILE A 50 PHE A 52 0 SHEET 2 B 8 PRO B 382 VAL B 388 -1 O LYS B 387 N ILE A 50 SHEET 3 B 8 PHE B 370 GLU B 376 -1 N MET B 374 O PHE B 384 SHEET 4 B 8 ALA A 248 PRO A 255 -1 N THR A 249 O ILE B 375 SHEET 5 B 8 SER A 237 LYS A 243 -1 N MET A 242 O ALA A 250 SHEET 6 B 8 THR A 214 ALA A 232 -1 N GLN A 230 O VAL A 239 SHEET 7 B 8 ARG A 282 PRO A 289 -1 O ARG A 282 N PHE A 227 SHEET 8 B 8 GLU B 363 LYS B 365 1 O VAL B 364 N HIS A 287 SHEET 1 C 6 SER A 140 VAL A 145 0 SHEET 2 C 6 GLN A 111 SER A 121 1 N LEU A 118 O GLU A 141 SHEET 3 C 6 PHE A 182 LYS A 193 -1 O PHE A 189 N THR A 113 SHEET 4 C 6 GLY A 344 PRO A 357 -1 O ASP A 353 N LEU A 184 SHEET 5 C 6 LEU A 327 ILE A 340 -1 N LYS A 328 O ILE A 356 SHEET 6 C 6 LEU A 291 ASP A 298 -1 N LEU A 291 O ILE A 340 CRYST1 37.450 83.270 61.090 90.00 99.66 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026702 0.000000 0.004545 0.00000 SCALE2 0.000000 0.012009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016605 0.00000