PDB Short entry for 3NJ8 HEADER OXIDOREDUCTASE 17-JUN-10 3NJ8 TITLE CRYSTAL STRUCTURE OF T. GONDII ENOYL ACYL CARRIER PROTEIN REDUCTASE TITLE 2 WITH BOUND TRICLOSAN LIKE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-ACYL CARRIER REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 103-417; COMPND 5 EC: 1.3.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 3 ORGANISM_TAXID: 5811; SOURCE 4 STRAIN: RH; SOURCE 5 GENE: ENOYL REDUCTASE, ENR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMALCHT KEYWDS ENOYL REDUCTASE, ENR TRICLOSAN, ROSSMANN NAD BINDING FOLD, NADH KEYWDS 2 BINDING, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.P.MUENCH,S.N.RUZHEINIKOV,D.W.RICE REVDAT 5 21-FEB-24 3NJ8 1 REMARK REVDAT 4 17-DEC-14 3NJ8 1 VERSN REVDAT 3 09-MAR-11 3NJ8 1 REMARK REVDAT 2 02-FEB-11 3NJ8 1 REMARK REVDAT 1 29-SEP-10 3NJ8 0 JRNL AUTH S.K.TIPPARAJU,S.P.MUENCH,E.J.MUI,S.N.RUZHEINIKOV,J.Z.LU, JRNL AUTH 2 S.L.HUTSON,M.J.KIRISITS,S.T.PRIGGE,C.W.ROBERTS, JRNL AUTH 3 F.L.HENRIQUEZ,A.P.KOZIKOWSKI,D.W.RICE,R.L.MCLEOD JRNL TITL IDENTIFICATION AND DEVELOPMENT OF NOVEL INHIBITORS OF JRNL TITL 2 TOXOPLASMA GONDII ENOYL REDUCTASE. JRNL REF J.MED.CHEM. V. 53 6287 2010 JRNL REFN ISSN 0022-2623 JRNL PMID 20698542 JRNL DOI 10.1021/JM9017724 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 16525 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.276 REMARK 3 R VALUE (WORKING SET) : 0.274 REMARK 3 FREE R VALUE : 0.322 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 840 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 756 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.3800 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.4340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4442 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 128 REMARK 3 SOLVENT ATOMS : 47 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.62000 REMARK 3 B22 (A**2) : 3.62000 REMARK 3 B33 (A**2) : -5.43000 REMARK 3 B12 (A**2) : 1.81000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.482 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.496 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 54.169 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4681 ; 0.003 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6376 ; 0.794 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 599 ; 4.830 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;30.572 ;23.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 697 ;13.769 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;14.552 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 705 ; 0.050 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3549 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2968 ; 0.077 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4707 ; 0.154 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1713 ; 0.282 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1665 ; 0.497 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 306 REMARK 3 RESIDUE RANGE : B 1 B 316 REMARK 3 RESIDUE RANGE : A 501 A 501 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2782 43.8099 64.7856 REMARK 3 T TENSOR REMARK 3 T11: 0.0523 T22: 0.3790 REMARK 3 T33: 0.2422 T12: -0.0262 REMARK 3 T13: 0.0144 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.6136 L22: 1.1749 REMARK 3 L33: 1.7562 L12: 0.4508 REMARK 3 L13: -0.1512 L23: -0.1113 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: 0.0357 S13: -0.0449 REMARK 3 S21: -0.0568 S22: -0.0261 S23: 0.2620 REMARK 3 S31: 0.1118 S32: -0.7953 S33: 0.0547 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 306 REMARK 3 RESIDUE RANGE : A 1 A 316 REMARK 3 RESIDUE RANGE : B 501 B 501 REMARK 3 ORIGIN FOR THE GROUP (A): 48.6813 45.5488 40.9465 REMARK 3 T TENSOR REMARK 3 T11: 0.1414 T22: 0.1179 REMARK 3 T33: 0.1779 T12: -0.0306 REMARK 3 T13: 0.0397 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 1.7525 L22: 1.7105 REMARK 3 L33: 3.8109 L12: -0.2905 REMARK 3 L13: -0.1593 L23: 0.0214 REMARK 3 S TENSOR REMARK 3 S11: -0.0570 S12: 0.4448 S13: -0.1509 REMARK 3 S21: -0.3707 S22: -0.0066 S23: -0.0575 REMARK 3 S31: 0.4502 S32: -0.0573 S33: 0.0636 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NJ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059897. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.960000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16525 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 50.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.38000 REMARK 200 R SYM (I) : 0.11000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 7.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44200 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, PEG 8000, PH 9.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 126.05133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.02567 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 63.02567 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 126.05133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 117.38400 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 67.77168 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 126.05133 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 330 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 237 REMARK 465 SER A 238 REMARK 465 GLY A 239 REMARK 465 LEU A 307 REMARK 465 GLN A 308 REMARK 465 ARG A 309 REMARK 465 ALA A 310 REMARK 465 THR A 311 REMARK 465 GLN A 312 REMARK 465 GLU A 313 REMARK 465 ILE A 314 REMARK 465 ASN A 315 REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 PHE B 3 REMARK 465 GLY B 236 REMARK 465 LYS B 237 REMARK 465 SER B 238 REMARK 465 GLY B 239 REMARK 465 GLU B 240 REMARK 465 LEU B 307 REMARK 465 GLN B 308 REMARK 465 ARG B 309 REMARK 465 ALA B 310 REMARK 465 THR B 311 REMARK 465 GLN B 312 REMARK 465 GLU B 313 REMARK 465 ILE B 314 REMARK 465 ASN B 315 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 3 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 55 CD OE1 NE2 REMARK 470 GLU A 61 CD OE1 OE2 REMARK 470 LYS A 94 CD CE NZ REMARK 470 ASP A 95 CG OD1 OD2 REMARK 470 LYS B 52 CE NZ REMARK 470 GLN B 55 CD OE1 NE2 REMARK 470 GLU B 72 CD OE1 OE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 ARG B 230 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 -156.97 -140.78 REMARK 500 LYS A 94 -32.13 -32.85 REMARK 500 SER A 127 74.36 -118.61 REMARK 500 ASN A 130 112.09 -164.29 REMARK 500 ALA A 154 -68.37 -104.01 REMARK 500 ASP A 289 16.87 -141.53 REMARK 500 PRO B 66 18.91 -53.94 REMARK 500 PRO B 90 171.85 -52.93 REMARK 500 LEU B 180 -34.93 -39.03 REMARK 500 ASP B 289 25.74 -151.93 REMARK 500 ASN B 290 16.65 59.98 REMARK 500 GLN B 297 134.14 -175.17 REMARK 500 SER B 301 150.04 -44.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 63 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NJ8 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NJ8 B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O2Y RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF P. FALCIPARUM ENOYL ACYL CARRIER PROTEIN REMARK 900 REDUCTASE REMARK 900 RELATED ID: 2O2S RELATED DB: PDB REMARK 900 THE STRUCTURE OF T. GONDII ENOYL ACYL CARRIER PROTEIN REDUCTASE IN REMARK 900 COMPLEX WITH NAD AND TRICLOSAN REMARK 900 RELATED ID: 2O50 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF TOXOPLASMA GONDII ENOYL ACYL CARRIER REMARK 900 PROTEIN REDUCTASE DBREF 3NJ8 A 1 315 UNP Q6UCJ9 Q6UCJ9_TOXGO 103 417 DBREF 3NJ8 B 1 315 UNP Q6UCJ9 Q6UCJ9_TOXGO 103 417 SEQRES 1 A 315 SER ALA PHE PRO ILE ASP LEU ARG GLY GLN THR ALA PHE SEQRES 2 A 315 VAL ALA GLY VAL ALA ASP SER HIS GLY TYR GLY TRP ALA SEQRES 3 A 315 ILE ALA LYS HIS LEU ALA SER ALA GLY ALA ARG VAL ALA SEQRES 4 A 315 LEU GLY THR TRP PRO PRO VAL LEU GLY LEU PHE GLN LYS SEQRES 5 A 315 SER LEU GLN SER GLY ARG LEU ASP GLU ASP ARG LYS LEU SEQRES 6 A 315 PRO ASP GLY SER LEU ILE GLU PHE ALA GLY VAL TYR PRO SEQRES 7 A 315 LEU ASP ALA ALA PHE ASP LYS PRO GLU ASP VAL PRO GLN SEQRES 8 A 315 ASP ILE LYS ASP ASN LYS ARG TYR ALA GLY VAL ASP GLY SEQRES 9 A 315 TYR THR ILE LYS GLU VAL ALA VAL LYS VAL LYS GLN ASP SEQRES 10 A 315 LEU GLY ASN ILE ASP ILE LEU VAL HIS SER LEU ALA ASN SEQRES 11 A 315 GLY PRO GLU VAL THR LYS PRO LEU LEU GLU THR SER ARG SEQRES 12 A 315 LYS GLY TYR LEU ALA ALA SER SER ASN SER ALA TYR SER SEQRES 13 A 315 PHE VAL SER LEU LEU GLN HIS PHE GLY PRO ILE MET ASN SEQRES 14 A 315 GLU GLY GLY SER ALA VAL THR LEU SER TYR LEU ALA ALA SEQRES 15 A 315 GLU ARG VAL VAL PRO GLY TYR GLY GLY GLY MET SER SER SEQRES 16 A 315 ALA LYS ALA ALA LEU GLU SER ASP THR ARG THR LEU ALA SEQRES 17 A 315 TRP GLU ALA GLY GLN LYS TYR GLY VAL ARG VAL ASN ALA SEQRES 18 A 315 ILE SER ALA GLY PRO LEU LYS SER ARG ALA ALA SER ALA SEQRES 19 A 315 ILE GLY LYS SER GLY GLU LYS SER PHE ILE ASP TYR ALA SEQRES 20 A 315 ILE ASP TYR SER TYR ASN ASN ALA PRO LEU ARG ARG ASP SEQRES 21 A 315 LEU HIS SER ASP ASP VAL GLY GLY ALA ALA LEU PHE LEU SEQRES 22 A 315 LEU SER PRO LEU ALA ARG ALA VAL SER GLY VAL THR LEU SEQRES 23 A 315 TYR VAL ASP ASN GLY LEU HIS ALA MET GLY GLN ALA VAL SEQRES 24 A 315 ASP SER ARG SER MET PRO PRO LEU GLN ARG ALA THR GLN SEQRES 25 A 315 GLU ILE ASN SEQRES 1 B 315 SER ALA PHE PRO ILE ASP LEU ARG GLY GLN THR ALA PHE SEQRES 2 B 315 VAL ALA GLY VAL ALA ASP SER HIS GLY TYR GLY TRP ALA SEQRES 3 B 315 ILE ALA LYS HIS LEU ALA SER ALA GLY ALA ARG VAL ALA SEQRES 4 B 315 LEU GLY THR TRP PRO PRO VAL LEU GLY LEU PHE GLN LYS SEQRES 5 B 315 SER LEU GLN SER GLY ARG LEU ASP GLU ASP ARG LYS LEU SEQRES 6 B 315 PRO ASP GLY SER LEU ILE GLU PHE ALA GLY VAL TYR PRO SEQRES 7 B 315 LEU ASP ALA ALA PHE ASP LYS PRO GLU ASP VAL PRO GLN SEQRES 8 B 315 ASP ILE LYS ASP ASN LYS ARG TYR ALA GLY VAL ASP GLY SEQRES 9 B 315 TYR THR ILE LYS GLU VAL ALA VAL LYS VAL LYS GLN ASP SEQRES 10 B 315 LEU GLY ASN ILE ASP ILE LEU VAL HIS SER LEU ALA ASN SEQRES 11 B 315 GLY PRO GLU VAL THR LYS PRO LEU LEU GLU THR SER ARG SEQRES 12 B 315 LYS GLY TYR LEU ALA ALA SER SER ASN SER ALA TYR SER SEQRES 13 B 315 PHE VAL SER LEU LEU GLN HIS PHE GLY PRO ILE MET ASN SEQRES 14 B 315 GLU GLY GLY SER ALA VAL THR LEU SER TYR LEU ALA ALA SEQRES 15 B 315 GLU ARG VAL VAL PRO GLY TYR GLY GLY GLY MET SER SER SEQRES 16 B 315 ALA LYS ALA ALA LEU GLU SER ASP THR ARG THR LEU ALA SEQRES 17 B 315 TRP GLU ALA GLY GLN LYS TYR GLY VAL ARG VAL ASN ALA SEQRES 18 B 315 ILE SER ALA GLY PRO LEU LYS SER ARG ALA ALA SER ALA SEQRES 19 B 315 ILE GLY LYS SER GLY GLU LYS SER PHE ILE ASP TYR ALA SEQRES 20 B 315 ILE ASP TYR SER TYR ASN ASN ALA PRO LEU ARG ARG ASP SEQRES 21 B 315 LEU HIS SER ASP ASP VAL GLY GLY ALA ALA LEU PHE LEU SEQRES 22 B 315 LEU SER PRO LEU ALA ARG ALA VAL SER GLY VAL THR LEU SEQRES 23 B 315 TYR VAL ASP ASN GLY LEU HIS ALA MET GLY GLN ALA VAL SEQRES 24 B 315 ASP SER ARG SER MET PRO PRO LEU GLN ARG ALA THR GLN SEQRES 25 B 315 GLU ILE ASN HET NAD A 316 44 HET NJ8 A 501 20 HET NAD B 316 44 HET NJ8 B 501 20 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NJ8 3-CHLORO-4-(2-HYDROXY-4-PROPYLPHENOXY)BENZONITRILE FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 NJ8 2(C16 H14 CL N O2) FORMUL 7 HOH *47(H2 O) HELIX 1 1 GLY A 22 ALA A 34 1 13 HELIX 2 2 TRP A 43 PRO A 45 5 3 HELIX 3 3 VAL A 46 GLY A 57 1 12 HELIX 4 4 LYS A 85 VAL A 89 5 5 HELIX 5 5 PRO A 90 ASP A 95 1 6 HELIX 6 6 ASN A 96 ALA A 100 5 5 HELIX 7 7 THR A 106 LEU A 118 1 13 HELIX 8 8 PRO A 137 THR A 141 5 5 HELIX 9 9 SER A 142 ALA A 154 1 13 HELIX 10 10 ALA A 154 GLY A 165 1 12 HELIX 11 11 ALA A 181 GLU A 183 5 3 HELIX 12 12 GLY A 192 TYR A 215 1 24 HELIX 13 13 SER A 229 ALA A 234 1 6 HELIX 14 14 SER A 242 ALA A 255 1 14 HELIX 15 15 HIS A 262 LEU A 274 1 13 HELIX 16 16 SER A 275 ARG A 279 5 5 HELIX 17 17 GLY A 291 MET A 295 5 5 HELIX 18 18 GLY B 22 ALA B 34 1 13 HELIX 19 19 TRP B 43 PRO B 45 5 3 HELIX 20 20 VAL B 46 SER B 56 1 11 HELIX 21 21 LYS B 85 VAL B 89 5 5 HELIX 22 22 PRO B 90 ASN B 96 1 7 HELIX 23 23 LYS B 97 ALA B 100 5 4 HELIX 24 24 THR B 106 GLY B 119 1 14 HELIX 25 25 SER B 142 ALA B 154 1 13 HELIX 26 26 ALA B 154 GLY B 165 1 12 HELIX 27 27 TYR B 179 GLU B 183 5 5 HELIX 28 28 GLY B 192 TYR B 215 1 24 HELIX 29 29 SER B 229 ALA B 234 1 6 HELIX 30 30 SER B 242 ALA B 255 1 14 HELIX 31 31 HIS B 262 SER B 275 1 14 HELIX 32 32 PRO B 276 ARG B 279 5 4 HELIX 33 33 GLY B 291 MET B 295 5 5 SHEET 1 A 7 GLY A 75 PRO A 78 0 SHEET 2 A 7 ARG A 37 THR A 42 1 N LEU A 40 O TYR A 77 SHEET 3 A 7 THR A 11 ALA A 15 1 N VAL A 14 O ALA A 39 SHEET 4 A 7 ILE A 121 HIS A 126 1 O VAL A 125 N PHE A 13 SHEET 5 A 7 MET A 168 TYR A 179 1 O VAL A 175 N HIS A 126 SHEET 6 A 7 ARG A 218 ALA A 224 1 O ARG A 218 N GLY A 172 SHEET 7 A 7 THR A 285 VAL A 288 1 O LEU A 286 N ALA A 221 SHEET 1 B 7 GLY B 75 PRO B 78 0 SHEET 2 B 7 ARG B 37 THR B 42 1 N LEU B 40 O TYR B 77 SHEET 3 B 7 THR B 11 ALA B 15 1 N VAL B 14 O GLY B 41 SHEET 4 B 7 ILE B 121 HIS B 126 1 O ASP B 122 N THR B 11 SHEET 5 B 7 MET B 168 SER B 178 1 O VAL B 175 N HIS B 126 SHEET 6 B 7 ARG B 218 ALA B 224 1 O ASN B 220 N ALA B 174 SHEET 7 B 7 THR B 285 VAL B 288 1 O LEU B 286 N ALA B 221 SITE 1 AC1 23 GLY A 16 ALA A 18 GLY A 22 TYR A 23 SITE 2 AC1 23 TRP A 43 LEU A 79 ALA A 81 SER A 127 SITE 3 AC1 23 LEU A 128 ALA A 129 LEU A 177 SER A 178 SITE 4 AC1 23 LYS A 197 GLY A 225 PRO A 226 LEU A 227 SITE 5 AC1 23 SER A 229 ALA A 231 HOH A 323 HOH A 324 SITE 6 AC1 23 HOH A 326 HOH A 329 NJ8 A 501 SITE 1 AC2 8 ALA A 129 ASN A 130 GLY A 131 TYR A 179 SITE 2 AC2 8 TYR A 189 ALA A 231 PHE A 243 NAD A 316 SITE 1 AC3 22 GLY B 16 ASP B 19 GLY B 22 TYR B 23 SITE 2 AC3 22 LEU B 79 ASP B 80 ALA B 81 ALA B 82 SITE 3 AC3 22 SER B 127 LEU B 128 ALA B 129 LEU B 177 SITE 4 AC3 22 LYS B 197 GLY B 225 PRO B 226 LEU B 227 SITE 5 AC3 22 SER B 229 ALA B 231 ALA B 232 HOH B 322 SITE 6 AC3 22 HOH B 323 NJ8 B 501 SITE 1 AC4 7 ALA B 129 ASN B 130 GLY B 131 TYR B 179 SITE 2 AC4 7 TYR B 189 ALA B 231 NAD B 316 CRYST1 78.256 78.256 189.077 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012779 0.007378 0.000000 0.00000 SCALE2 0.000000 0.014755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005289 0.00000