PDB Short entry for 3OB6 HEADER MEMBRANE PROTEIN 06-AUG-10 3OB6 TITLE STRUCTURE OF ADIC(N101A) IN THE OPEN-TO-OUT ARG+ BOUND CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADIC ARGININE:AGMATINE ANTIPORTER; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADIC; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: ADIC, B21_03947; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PTTQ18-HIS6-ADIC KEYWDS AMINO ACID ANTIPORTER, ARGININE, MEMBRANE, TRANSMEMBRANE ANTIPORTER, KEYWDS 2 APC-T, 5+5 INVERTED REPEAT, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.CARPENA,L.KOWALCZYK,M.RATERA,E.VALENCIA,J.L.VAZQUEZ-LBAR,I.FITA, AUTHOR 2 M.PALACIN REVDAT 3 06-SEP-23 3OB6 1 REMARK SEQADV REVDAT 2 30-MAR-11 3OB6 1 JRNL REVDAT 1 16-MAR-11 3OB6 0 JRNL AUTH L.KOWALCZYK,M.RATERA,A.PALADINO,P.BARTOCCIONI, JRNL AUTH 2 E.ERRASTI-MURUGARREN,E.VALENCIA,G.PORTELLA,S.BIAL,A.ZORZANO, JRNL AUTH 3 I.FITA,M.OROZCO,X.CARPENA,J.L.VAZQUEZ-IBAR,M.PALACIN JRNL TITL MOLECULAR BASIS OF SUBSTRATE-INDUCED PERMEATION BY AN AMINO JRNL TITL 2 ACID ANTIPORTER. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 3935 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21368142 JRNL DOI 10.1073/PNAS.1018081108 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 23349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1239 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.4090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6411 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.01000 REMARK 3 B22 (A**2) : 7.67000 REMARK 3 B33 (A**2) : -1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.97000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.447 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.410 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 51.527 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6601 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4226 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9030 ; 1.418 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10346 ; 1.063 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 863 ; 6.665 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;35.670 ;22.011 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 975 ;20.656 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;16.245 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1089 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7282 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1386 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4287 ; 0.381 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1784 ; 0.070 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6885 ; 0.745 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2314 ; 1.024 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2145 ; 1.694 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 5 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 5 A 170 3 REMARK 3 1 B 5 B 170 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 967 ; 0.04 ; 0.05 REMARK 3 LOOSE POSITIONAL 1 A (A): 1099 ; 0.05 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 967 ; 0.07 ; 0.50 REMARK 3 LOOSE THERMAL 1 A (A**2): 1099 ; 0.06 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 275 A 339 3 REMARK 3 1 B 275 B 339 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 377 ; 0.03 ; 0.05 REMARK 3 LOOSE POSITIONAL 2 A (A): 367 ; 0.03 ; 5.00 REMARK 3 TIGHT THERMAL 2 A (A**2): 377 ; 0.06 ; 0.50 REMARK 3 LOOSE THERMAL 2 A (A**2): 367 ; 0.06 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 355 A 440 3 REMARK 3 1 B 355 B 440 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 507 ; 0.04 ; 0.05 REMARK 3 LOOSE POSITIONAL 3 A (A): 605 ; 0.07 ; 5.00 REMARK 3 TIGHT THERMAL 3 A (A**2): 507 ; 0.07 ; 0.50 REMARK 3 LOOSE THERMAL 3 A (A**2): 605 ; 0.07 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 181 A 265 3 REMARK 3 1 B 181 B 265 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 4 A (A): 497 ; 0.04 ; 0.05 REMARK 3 LOOSE POSITIONAL 4 A (A): 486 ; 0.06 ; 5.00 REMARK 3 TIGHT THERMAL 4 A (A**2): 497 ; 0.07 ; 0.50 REMARK 3 LOOSE THERMAL 4 A (A**2): 486 ; 0.07 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 450 A 450 4 REMARK 3 1 B 450 B 450 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 5 A (A): 25 ; 0.76 ; 0.50 REMARK 3 MEDIUM THERMAL 5 A (A**2): 25 ; 0.13 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 440 REMARK 3 RESIDUE RANGE : A 450 A 450 REMARK 3 ORIGIN FOR THE GROUP (A): 38.9334 -6.1723 27.6921 REMARK 3 T TENSOR REMARK 3 T11: 0.2734 T22: 0.1079 REMARK 3 T33: 0.2633 T12: 0.0237 REMARK 3 T13: 0.0397 T23: -0.0909 REMARK 3 L TENSOR REMARK 3 L11: 3.1436 L22: 1.0561 REMARK 3 L33: 2.2160 L12: -0.4146 REMARK 3 L13: 0.9486 L23: -0.8136 REMARK 3 S TENSOR REMARK 3 S11: 0.0949 S12: 0.3265 S13: -0.2069 REMARK 3 S21: 0.1277 S22: -0.1219 S23: -0.0959 REMARK 3 S31: 0.0043 S32: 0.3777 S33: 0.0270 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 440 REMARK 3 RESIDUE RANGE : B 450 B 450 REMARK 3 ORIGIN FOR THE GROUP (A): 0.7927 6.5877 21.4669 REMARK 3 T TENSOR REMARK 3 T11: 0.2605 T22: 0.2712 REMARK 3 T33: 0.1769 T12: 0.0155 REMARK 3 T13: -0.0304 T23: -0.1180 REMARK 3 L TENSOR REMARK 3 L11: 3.1774 L22: 2.1336 REMARK 3 L33: 1.9682 L12: -0.2071 REMARK 3 L13: 0.5029 L23: 0.5030 REMARK 3 S TENSOR REMARK 3 S11: -0.0277 S12: 0.1270 S13: 0.0457 REMARK 3 S21: 0.1273 S22: -0.1790 S23: 0.2645 REMARK 3 S31: -0.2501 S32: -0.5534 S33: 0.2067 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OB6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000060894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24681 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3LRB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24-28% PEG400, 2MM CYMAL-5, 1MM LDAO, REMARK 280 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.60200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 ASN A 345 REMARK 465 ALA A 346 REMARK 465 THR A 347 REMARK 465 LYS A 348 REMARK 465 GLU A 349 REMARK 465 PHE A 350 REMARK 465 PRO A 441 REMARK 465 ILE A 442 REMARK 465 SER A 443 REMARK 465 LYS A 444 REMARK 465 ASP A 445 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 ASP B 4 REMARK 465 PRO B 441 REMARK 465 ILE B 442 REMARK 465 SER B 443 REMARK 465 LYS B 444 REMARK 465 ASP B 445 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 436 NZ LYS B 433 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 6 103.28 -44.46 REMARK 500 ALA A 7 -44.01 -143.66 REMARK 500 HIS A 8 58.06 -94.02 REMARK 500 PRO A 68 54.47 -94.71 REMARK 500 PHE A 116 79.75 -112.22 REMARK 500 ILE A 118 -39.05 -22.59 REMARK 500 LEU A 119 51.69 -113.19 REMARK 500 VAL A 167 -73.44 -86.48 REMARK 500 ALA A 180 -28.12 -38.85 REMARK 500 ALA A 181 57.13 -112.64 REMARK 500 ALA A 213 31.57 -89.67 REMARK 500 ALA A 269 -62.35 -91.18 REMARK 500 ASP A 272 -73.12 69.83 REMARK 500 GLN A 338 -46.58 -161.61 REMARK 500 SER A 341 -98.22 -59.98 REMARK 500 ILE A 342 -73.03 71.32 REMARK 500 SER A 343 -59.38 -168.94 REMARK 500 ARG A 430 -52.48 98.33 REMARK 500 ASP B 6 103.12 -44.73 REMARK 500 ALA B 7 -45.66 -142.60 REMARK 500 PRO B 68 54.73 -96.87 REMARK 500 ILE B 118 -41.69 -22.02 REMARK 500 LEU B 119 53.16 -112.02 REMARK 500 VAL B 167 -76.07 -82.54 REMARK 500 ALA B 181 58.43 -96.71 REMARK 500 ASN B 219 78.77 -112.87 REMARK 500 ALA B 269 -73.32 -55.24 REMARK 500 ASP B 272 -136.45 32.33 REMARK 500 GLN B 338 -46.83 -160.42 REMARK 500 SER B 343 118.23 -21.88 REMARK 500 PRO B 344 -92.14 23.44 REMARK 500 ASN B 345 -75.37 61.11 REMARK 500 THR B 347 -100.84 -146.39 REMARK 500 LYS B 348 -161.25 -128.55 REMARK 500 GLU B 349 106.06 -162.70 REMARK 500 PHE B 350 -20.76 134.63 REMARK 500 VAL B 353 0.27 -67.41 REMARK 500 ARG B 430 -53.42 101.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARG A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARG B 450 DBREF 3OB6 A 1 445 UNP C5WBZ6 C5WBZ6_ECOBB 1 445 DBREF 3OB6 B 1 445 UNP C5WBZ6 C5WBZ6_ECOBB 1 445 SEQADV 3OB6 ALA A 101 UNP C5WBZ6 ASN 101 ENGINEERED MUTATION SEQADV 3OB6 ALA B 101 UNP C5WBZ6 ASN 101 ENGINEERED MUTATION SEQRES 1 A 445 MET SER SER ASP ALA ASP ALA HIS LYS VAL GLY LEU ILE SEQRES 2 A 445 PRO VAL THR LEU MET VAL SER GLY ASN ILE MET GLY SER SEQRES 3 A 445 GLY VAL PHE LEU LEU PRO ALA ASN LEU ALA SER THR GLY SEQRES 4 A 445 GLY ILE ALA ILE TYR GLY TRP LEU VAL THR ILE ILE GLY SEQRES 5 A 445 ALA LEU GLY LEU SER MET VAL TYR ALA LYS MET SER PHE SEQRES 6 A 445 LEU ASP PRO SER PRO GLY GLY SER TYR ALA TYR ALA ARG SEQRES 7 A 445 ARG CYS PHE GLY PRO PHE LEU GLY TYR GLN THR ASN VAL SEQRES 8 A 445 LEU TYR TRP LEU ALA CYS TRP ILE GLY ALA ILE ALA MET SEQRES 9 A 445 VAL VAL ILE GLY VAL GLY TYR LEU SER TYR PHE PHE PRO SEQRES 10 A 445 ILE LEU LYS ASP PRO LEU VAL LEU THR ILE THR CYS VAL SEQRES 11 A 445 VAL VAL LEU TRP ILE PHE VAL LEU LEU ASN ILE VAL GLY SEQRES 12 A 445 PRO LYS MET ILE THR ARG VAL GLN ALA VAL ALA THR VAL SEQRES 13 A 445 LEU ALA LEU ILE PRO ILE VAL GLY ILE ALA VAL PHE GLY SEQRES 14 A 445 TRP PHE TRP PHE ARG GLY GLU THR TYR MET ALA ALA TRP SEQRES 15 A 445 ASN VAL SER GLY LEU GLY THR PHE GLY ALA ILE GLN SER SEQRES 16 A 445 THR LEU ASN VAL THR LEU TRP SER PHE ILE GLY VAL GLU SEQRES 17 A 445 SER ALA SER VAL ALA ALA GLY VAL VAL LYS ASN PRO LYS SEQRES 18 A 445 ARG ASN VAL PRO ILE ALA THR ILE GLY GLY VAL LEU ILE SEQRES 19 A 445 ALA ALA VAL CYS TYR VAL LEU SER THR THR ALA ILE MET SEQRES 20 A 445 GLY MET ILE PRO ASN ALA ALA LEU ARG VAL SER ALA SER SEQRES 21 A 445 PRO PHE GLY ASP ALA ALA ARG MET ALA LEU GLY ASP THR SEQRES 22 A 445 ALA GLY ALA ILE VAL SER PHE CYS ALA ALA ALA GLY CYS SEQRES 23 A 445 LEU GLY SER LEU GLY GLY TRP THR LEU LEU ALA GLY GLN SEQRES 24 A 445 THR ALA LYS ALA ALA ALA ASP ASP GLY LEU PHE PRO PRO SEQRES 25 A 445 ILE PHE ALA ARG VAL ASN LYS ALA GLY THR PRO VAL ALA SEQRES 26 A 445 GLY LEU ILE ILE VAL GLY ILE LEU MET THR ILE PHE GLN SEQRES 27 A 445 LEU SER SER ILE SER PRO ASN ALA THR LYS GLU PHE GLY SEQRES 28 A 445 LEU VAL SER SER VAL SER VAL ILE PHE THR LEU VAL PRO SEQRES 29 A 445 TYR LEU TYR THR CYS ALA ALA LEU LEU LEU LEU GLY HIS SEQRES 30 A 445 GLY HIS PHE GLY LYS ALA ARG PRO ALA TYR LEU ALA VAL SEQRES 31 A 445 THR THR ILE ALA PHE LEU TYR CYS ILE TRP ALA VAL VAL SEQRES 32 A 445 GLY SER GLY ALA LYS GLU VAL MET TRP SER PHE VAL THR SEQRES 33 A 445 LEU MET VAL ILE THR ALA MET TYR ALA LEU ASN TYR ASN SEQRES 34 A 445 ARG LEU HIS LYS ASN PRO TYR PRO LEU ASP ALA PRO ILE SEQRES 35 A 445 SER LYS ASP SEQRES 1 B 445 MET SER SER ASP ALA ASP ALA HIS LYS VAL GLY LEU ILE SEQRES 2 B 445 PRO VAL THR LEU MET VAL SER GLY ASN ILE MET GLY SER SEQRES 3 B 445 GLY VAL PHE LEU LEU PRO ALA ASN LEU ALA SER THR GLY SEQRES 4 B 445 GLY ILE ALA ILE TYR GLY TRP LEU VAL THR ILE ILE GLY SEQRES 5 B 445 ALA LEU GLY LEU SER MET VAL TYR ALA LYS MET SER PHE SEQRES 6 B 445 LEU ASP PRO SER PRO GLY GLY SER TYR ALA TYR ALA ARG SEQRES 7 B 445 ARG CYS PHE GLY PRO PHE LEU GLY TYR GLN THR ASN VAL SEQRES 8 B 445 LEU TYR TRP LEU ALA CYS TRP ILE GLY ALA ILE ALA MET SEQRES 9 B 445 VAL VAL ILE GLY VAL GLY TYR LEU SER TYR PHE PHE PRO SEQRES 10 B 445 ILE LEU LYS ASP PRO LEU VAL LEU THR ILE THR CYS VAL SEQRES 11 B 445 VAL VAL LEU TRP ILE PHE VAL LEU LEU ASN ILE VAL GLY SEQRES 12 B 445 PRO LYS MET ILE THR ARG VAL GLN ALA VAL ALA THR VAL SEQRES 13 B 445 LEU ALA LEU ILE PRO ILE VAL GLY ILE ALA VAL PHE GLY SEQRES 14 B 445 TRP PHE TRP PHE ARG GLY GLU THR TYR MET ALA ALA TRP SEQRES 15 B 445 ASN VAL SER GLY LEU GLY THR PHE GLY ALA ILE GLN SER SEQRES 16 B 445 THR LEU ASN VAL THR LEU TRP SER PHE ILE GLY VAL GLU SEQRES 17 B 445 SER ALA SER VAL ALA ALA GLY VAL VAL LYS ASN PRO LYS SEQRES 18 B 445 ARG ASN VAL PRO ILE ALA THR ILE GLY GLY VAL LEU ILE SEQRES 19 B 445 ALA ALA VAL CYS TYR VAL LEU SER THR THR ALA ILE MET SEQRES 20 B 445 GLY MET ILE PRO ASN ALA ALA LEU ARG VAL SER ALA SER SEQRES 21 B 445 PRO PHE GLY ASP ALA ALA ARG MET ALA LEU GLY ASP THR SEQRES 22 B 445 ALA GLY ALA ILE VAL SER PHE CYS ALA ALA ALA GLY CYS SEQRES 23 B 445 LEU GLY SER LEU GLY GLY TRP THR LEU LEU ALA GLY GLN SEQRES 24 B 445 THR ALA LYS ALA ALA ALA ASP ASP GLY LEU PHE PRO PRO SEQRES 25 B 445 ILE PHE ALA ARG VAL ASN LYS ALA GLY THR PRO VAL ALA SEQRES 26 B 445 GLY LEU ILE ILE VAL GLY ILE LEU MET THR ILE PHE GLN SEQRES 27 B 445 LEU SER SER ILE SER PRO ASN ALA THR LYS GLU PHE GLY SEQRES 28 B 445 LEU VAL SER SER VAL SER VAL ILE PHE THR LEU VAL PRO SEQRES 29 B 445 TYR LEU TYR THR CYS ALA ALA LEU LEU LEU LEU GLY HIS SEQRES 30 B 445 GLY HIS PHE GLY LYS ALA ARG PRO ALA TYR LEU ALA VAL SEQRES 31 B 445 THR THR ILE ALA PHE LEU TYR CYS ILE TRP ALA VAL VAL SEQRES 32 B 445 GLY SER GLY ALA LYS GLU VAL MET TRP SER PHE VAL THR SEQRES 33 B 445 LEU MET VAL ILE THR ALA MET TYR ALA LEU ASN TYR ASN SEQRES 34 B 445 ARG LEU HIS LYS ASN PRO TYR PRO LEU ASP ALA PRO ILE SEQRES 35 B 445 SER LYS ASP HET ARG A 450 12 HET ARG B 450 12 HETNAM ARG ARGININE FORMUL 3 ARG 2(C6 H15 N4 O2 1+) HELIX 1 1 GLY A 11 GLY A 25 1 15 HELIX 2 2 LEU A 30 ALA A 36 1 7 HELIX 3 3 SER A 37 THR A 38 5 2 HELIX 4 4 GLY A 39 GLY A 40 5 2 HELIX 5 5 ILE A 41 ASP A 67 1 27 HELIX 6 6 GLY A 72 GLY A 82 1 11 HELIX 7 7 GLY A 82 LEU A 112 1 31 HELIX 8 8 SER A 113 PHE A 115 5 3 HELIX 9 9 PHE A 116 LYS A 120 5 5 HELIX 10 10 ASP A 121 VAL A 142 1 22 HELIX 11 11 GLY A 143 GLY A 169 1 27 HELIX 12 12 TRP A 170 PHE A 173 5 4 HELIX 13 13 ARG A 174 ALA A 181 1 8 HELIX 14 14 GLY A 188 LEU A 201 1 14 HELIX 15 15 TRP A 202 PHE A 204 5 3 HELIX 16 16 GLU A 208 ALA A 213 1 6 HELIX 17 17 ALA A 214 VAL A 217 5 4 HELIX 18 18 ASN A 219 GLY A 248 1 30 HELIX 19 19 PRO A 251 VAL A 257 1 7 HELIX 20 20 SER A 260 LEU A 270 1 11 HELIX 21 21 THR A 273 ASP A 307 1 35 HELIX 22 22 PRO A 311 ARG A 316 5 6 HELIX 23 23 PRO A 323 SER A 340 1 18 HELIX 24 24 GLY A 351 THR A 361 1 11 HELIX 25 25 THR A 361 HIS A 377 1 17 HELIX 26 26 GLY A 378 LYS A 382 5 5 HELIX 27 27 ALA A 383 GLY A 404 1 22 HELIX 28 28 GLY A 406 ASN A 429 1 24 HELIX 29 29 GLY B 11 GLY B 25 1 15 HELIX 30 30 LEU B 30 ALA B 36 1 7 HELIX 31 31 SER B 37 THR B 38 5 2 HELIX 32 32 GLY B 39 GLY B 40 5 2 HELIX 33 33 ILE B 41 ASP B 67 1 27 HELIX 34 34 GLY B 72 GLY B 82 1 11 HELIX 35 35 GLY B 82 SER B 113 1 32 HELIX 36 36 TYR B 114 PHE B 115 5 2 HELIX 37 37 PHE B 116 LYS B 120 5 5 HELIX 38 38 ASP B 121 VAL B 142 1 22 HELIX 39 39 GLY B 143 GLY B 169 1 27 HELIX 40 40 TRP B 170 TRP B 172 5 3 HELIX 41 41 ARG B 174 ALA B 181 1 8 HELIX 42 42 GLY B 188 LEU B 201 1 14 HELIX 43 43 TRP B 202 ILE B 205 5 4 HELIX 44 44 GLU B 208 ALA B 213 1 6 HELIX 45 45 ALA B 214 VAL B 217 5 4 HELIX 46 46 ASN B 219 MET B 247 1 29 HELIX 47 47 PRO B 251 VAL B 257 1 7 HELIX 48 48 SER B 260 LEU B 270 1 11 HELIX 49 49 ALA B 274 ASP B 307 1 34 HELIX 50 50 PRO B 311 ARG B 316 5 6 HELIX 51 51 PRO B 323 SER B 340 1 18 HELIX 52 52 GLY B 351 THR B 361 1 11 HELIX 53 53 THR B 361 HIS B 377 1 17 HELIX 54 54 GLY B 378 LYS B 382 5 5 HELIX 55 55 ALA B 383 GLY B 404 1 22 HELIX 56 56 GLY B 406 ASN B 429 1 24 CISPEP 1 ASP A 6 ALA A 7 0 -5.66 CISPEP 2 SER A 343 PRO A 344 0 10.68 CISPEP 3 ASP B 6 ALA B 7 0 -5.25 CISPEP 4 GLU B 349 PHE B 350 0 16.85 SITE 1 AC1 9 ILE A 23 SER A 26 GLY A 27 ALA A 96 SITE 2 AC1 9 GLY A 100 TRP A 202 ILE A 205 TRP A 293 SITE 3 AC1 9 SER A 357 SITE 1 AC2 7 ASN B 22 ILE B 23 MET B 24 SER B 26 SITE 2 AC2 7 MET B 104 ILE B 107 ILE B 205 CRYST1 86.071 77.204 104.451 90.00 106.79 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011618 0.000000 0.003506 0.00000 SCALE2 0.000000 0.012953 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010000 0.00000