PDB Short entry for 3OKU HEADER LYASE 25-AUG-10 3OKU TITLE HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH 2-ETHYLESTRONE-3-O- TITLE 2 SULFAMATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONIC ANHYDRASE II, CA-II, CARBONATE DEHYDRATASE II, COMPND 5 CARBONIC ANHYDRASE C, CAC; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS MIXED ALPHA/BETA FOLD, REVERSIBLE HYDRATION OF CARBON DIOXIDE TO KEYWDS 2 BICARBONATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.H.SIPPEL,B.A.STANDER,A.H.ROBBINS,C.K.TU,M.AGBANDJE-MCKENNA, AUTHOR 2 D.N.SILVERMAN,A.M.JOUBERT,R.MCKENNA REVDAT 3 06-SEP-23 3OKU 1 REMARK LINK REVDAT 2 08-NOV-17 3OKU 1 REMARK REVDAT 1 06-JUL-11 3OKU 0 JRNL AUTH K.H.SIPPEL,B.A.STANDER,A.H.ROBBINS,C.K.TU, JRNL AUTH 2 M.AGBANDJE-MCKENNA,D.N.SILVERMAN,A.M.JOUBERT,R.MCKENNA JRNL TITL CHARACTERIZATION OF CARBONIC ANHYDRASE ISOZYME SPECIFIC JRNL TITL 2 INHIBITION BY SULFAMATED 2-ETHYLESTRA COMPOUNDS JRNL REF LETT.DRUG DES.DISCOVERY V. 8 2011 JRNL REFN ISSN 1570-1808 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.E.COZIER,M.P.LEESE,M.D.LLOYD,M.D.BAKER,N.THIYAGARAJAN, REMARK 1 AUTH 2 K.R.ACHARYA,B.V.POTTER REMARK 1 TITL STRUCTURES OF HUMAN CARBONIC ANHYDRASE II/INHIBITOR REMARK 1 TITL 2 COMPLEXES REVEAL A SECOND BINDING SITE FOR STEROIDAL AND REMARK 1 TITL 3 NONSTEROIDAL INHIBITORS. REMARK 1 REF BIOCHEMISTRY V. 49 3464 2010 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 20297840 REMARK 1 DOI 10.1021/BI902178W REMARK 1 REFERENCE 2 REMARK 1 AUTH C.GENIS,K.H.SIPPEL,N.CASE,W.CAO,B.S.AVVARU,L.J.TARTAGLIA, REMARK 1 AUTH 2 L.GOVINDASAMY,C.TU,M.AGBANDJE-MCKENNA,D.N.SILVERMAN, REMARK 1 AUTH 3 C.J.ROSSER,R.MCKENNA REMARK 1 TITL DESIGN OF A CARBONIC ANHYDRASE IX ACTIVE-SITE MIMIC TO REMARK 1 TITL 2 SCREEN INHIBITORS FOR POSSIBLE ANTICANCER PROPERTIES. REMARK 1 REF BIOCHEMISTRY V. 48 1322 2009 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 19170619 REMARK 1 DOI 10.1021/BI802035F REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.3_467 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 40188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.1314 - 3.4901 0.99 2967 152 0.1387 0.1619 REMARK 3 2 3.4901 - 2.7717 1.00 2902 162 0.1316 0.1314 REMARK 3 3 2.7717 - 2.4217 0.99 2889 148 0.1274 0.1351 REMARK 3 4 2.4217 - 2.2005 0.99 2858 145 0.1221 0.1447 REMARK 3 5 2.2005 - 2.0429 0.98 2805 144 0.1333 0.1528 REMARK 3 6 2.0429 - 1.9225 0.97 2818 144 0.1365 0.1457 REMARK 3 7 1.9225 - 1.8263 0.97 2793 149 0.1332 0.1597 REMARK 3 8 1.8263 - 1.7468 0.96 2738 145 0.1343 0.1674 REMARK 3 9 1.7468 - 1.6796 0.95 2726 139 0.1284 0.1776 REMARK 3 10 1.6796 - 1.6216 0.95 2708 143 0.1398 0.1540 REMARK 3 11 1.6216 - 1.5709 0.93 2682 142 0.1508 0.1827 REMARK 3 12 1.5709 - 1.5260 0.92 2618 139 0.2120 0.2238 REMARK 3 13 1.5260 - 1.4859 0.91 2631 136 0.2834 0.3016 REMARK 3 14 1.4859 - 1.4500 0.73 2054 111 0.3902 0.3588 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.30 REMARK 3 SHRINKAGE RADIUS : 0.05 REMARK 3 K_SOL : 0.51 REMARK 3 B_SOL : 62.45 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.34100 REMARK 3 B22 (A**2) : -0.09500 REMARK 3 B33 (A**2) : 1.43610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.75590 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2375 REMARK 3 ANGLE : 1.418 3271 REMARK 3 CHIRALITY : 0.083 342 REMARK 3 PLANARITY : 0.008 430 REMARK 3 DIHEDRAL : 12.572 926 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:9) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9502 -4.3213 10.8242 REMARK 3 T TENSOR REMARK 3 T11: 0.1584 T22: 0.2068 REMARK 3 T33: 0.2276 T12: -0.0136 REMARK 3 T13: 0.0402 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.0228 L22: 0.0063 REMARK 3 L33: 0.0231 L12: -0.0051 REMARK 3 L13: 0.0047 L23: 0.0043 REMARK 3 S TENSOR REMARK 3 S11: -0.0700 S12: 0.1262 S13: -0.0425 REMARK 3 S21: -0.0621 S22: -0.1287 S23: -0.4034 REMARK 3 S31: -0.0456 S32: 0.2770 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 10:45) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0302 -2.5381 27.5522 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.1513 REMARK 3 T33: 0.1092 T12: 0.0142 REMARK 3 T13: 0.0137 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.2433 L22: 0.4472 REMARK 3 L33: 0.8415 L12: -0.1360 REMARK 3 L13: 0.2178 L23: -0.4162 REMARK 3 S TENSOR REMARK 3 S11: -0.0997 S12: -0.2255 S13: -0.0233 REMARK 3 S21: 0.1098 S22: 0.1043 S23: -0.0613 REMARK 3 S31: -0.0040 S32: 0.0295 S33: -0.0126 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 46:87) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7902 6.7845 13.1098 REMARK 3 T TENSOR REMARK 3 T11: 0.1446 T22: 0.1180 REMARK 3 T33: 0.1600 T12: 0.0023 REMARK 3 T13: -0.0132 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.2561 L22: 0.2865 REMARK 3 L33: 0.2673 L12: -0.0151 REMARK 3 L13: 0.2004 L23: -0.0813 REMARK 3 S TENSOR REMARK 3 S11: 0.0669 S12: -0.0361 S13: 0.1005 REMARK 3 S21: -0.0841 S22: -0.0270 S23: 0.0483 REMARK 3 S31: -0.1546 S32: -0.0124 S33: 0.0118 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 88:251) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1025 -3.4688 13.2198 REMARK 3 T TENSOR REMARK 3 T11: 0.1000 T22: 0.0868 REMARK 3 T33: 0.0946 T12: -0.0068 REMARK 3 T13: -0.0032 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.4473 L22: 0.3531 REMARK 3 L33: 0.5564 L12: -0.0686 REMARK 3 L13: -0.0053 L23: 0.0116 REMARK 3 S TENSOR REMARK 3 S11: -0.0019 S12: -0.0031 S13: -0.0139 REMARK 3 S21: -0.0732 S22: 0.0003 S23: 0.0211 REMARK 3 S31: -0.0070 S32: 0.0199 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 252:261) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7926 -3.6006 34.4292 REMARK 3 T TENSOR REMARK 3 T11: 0.1489 T22: 0.2437 REMARK 3 T33: 0.1303 T12: 0.0114 REMARK 3 T13: 0.0128 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.1282 L22: 0.1100 REMARK 3 L33: 0.0603 L12: -0.0763 REMARK 3 L13: 0.0240 L23: 0.0099 REMARK 3 S TENSOR REMARK 3 S11: -0.0558 S12: -0.4482 S13: 0.0455 REMARK 3 S21: 0.1857 S22: 0.1334 S23: 0.0355 REMARK 3 S31: 0.1269 S32: 0.0132 S33: -0.0015 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: INDIVIDUAL COORDINATE AND ADP REMARK 3 REFINEMENT, RIGID BODY, TLS, RIDING HYDROGEN, OCCUPANCY REMARK 4 REMARK 4 3OKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1000061242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40524 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.20600 REMARK 200 R SYM FOR SHELL (I) : 0.20600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHENIX 1.6.3_467 REMARK 200 STARTING MODEL: PDB ENTRY 2ILI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M SODIUM CITRATE, 100MM TRIS, 7.5 REMARK 280 MM 2-ETHYLESTRONE 3-O-SULFAMATE, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.59950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 27 54.05 -142.50 REMARK 500 ASP A 41 79.43 -118.16 REMARK 500 SER A 43 -13.16 87.70 REMARK 500 LEU A 44 111.61 -34.80 REMARK 500 LYS A 111 -1.66 72.84 REMARK 500 PHE A 176 74.42 -153.58 REMARK 500 ASN A 244 46.40 -93.98 REMARK 500 LYS A 252 -136.85 52.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 262 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 106.2 REMARK 620 3 HIS A 119 ND1 111.3 99.8 REMARK 620 4 VZ4 A 263 NAC 117.3 110.4 110.3 REMARK 620 5 HOH A 570 O 104.1 109.8 124.5 15.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VZ4 A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 265 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IOK RELATED DB: PDB REMARK 900 RELATED ID: 3IOL RELATED DB: PDB REMARK 900 RELATED ID: 3IOM RELATED DB: PDB REMARK 900 RELATED ID: 3OKV RELATED DB: PDB DBREF 3OKU A 1 261 UNP P00918 CAH2_HUMAN 1 260 SEQRES 1 A 260 MET SER HIS HIS TRP GLY TYR GLY LYS HIS ASN GLY PRO SEQRES 2 A 260 GLU HIS TRP HIS LYS ASP PHE PRO ILE ALA LYS GLY GLU SEQRES 3 A 260 ARG GLN SER PRO VAL ASP ILE ASP THR HIS THR ALA LYS SEQRES 4 A 260 TYR ASP PRO SER LEU LYS PRO LEU SER VAL SER TYR ASP SEQRES 5 A 260 GLN ALA THR SER LEU ARG ILE LEU ASN ASN GLY HIS ALA SEQRES 6 A 260 PHE ASN VAL GLU PHE ASP ASP SER GLN ASP LYS ALA VAL SEQRES 7 A 260 LEU LYS GLY GLY PRO LEU ASP GLY THR TYR ARG LEU ILE SEQRES 8 A 260 GLN PHE HIS PHE HIS TRP GLY SER LEU ASP GLY GLN GLY SEQRES 9 A 260 SER GLU HIS THR VAL ASP LYS LYS LYS TYR ALA ALA GLU SEQRES 10 A 260 LEU HIS LEU VAL HIS TRP ASN THR LYS TYR GLY ASP PHE SEQRES 11 A 260 GLY LYS ALA VAL GLN GLN PRO ASP GLY LEU ALA VAL LEU SEQRES 12 A 260 GLY ILE PHE LEU LYS VAL GLY SER ALA LYS PRO GLY LEU SEQRES 13 A 260 GLN LYS VAL VAL ASP VAL LEU ASP SER ILE LYS THR LYS SEQRES 14 A 260 GLY LYS SER ALA ASP PHE THR ASN PHE ASP PRO ARG GLY SEQRES 15 A 260 LEU LEU PRO GLU SER LEU ASP TYR TRP THR TYR PRO GLY SEQRES 16 A 260 SER LEU THR THR PRO PRO LEU LEU GLU CYS VAL THR TRP SEQRES 17 A 260 ILE VAL LEU LYS GLU PRO ILE SER VAL SER SER GLU GLN SEQRES 18 A 260 VAL LEU LYS PHE ARG LYS LEU ASN PHE ASN GLY GLU GLY SEQRES 19 A 260 GLU PRO GLU GLU LEU MET VAL ASP ASN TRP ARG PRO ALA SEQRES 20 A 260 GLN PRO LEU LYS ASN ARG GLN ILE LYS ALA SER PHE LYS HET ZN A 262 1 HET VZ4 A 263 26 HET DMS A 264 4 HET GOL A 265 6 HETNAM ZN ZINC ION HETNAM VZ4 (9BETA)-2-ETHYL-17-OXOESTRA-1(10),2,4-TRIEN-3-YL HETNAM 2 VZ4 SULFAMATE HETNAM DMS DIMETHYL SULFOXIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 VZ4 C20 H27 N O4 S FORMUL 4 DMS C2 H6 O S FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *341(H2 O) HELIX 1 1 HIS A 15 ASP A 19 5 5 HELIX 2 2 PHE A 20 GLY A 25 5 6 HELIX 3 3 LYS A 127 GLY A 129 5 3 HELIX 4 4 ASP A 130 VAL A 135 1 6 HELIX 5 5 LYS A 154 GLY A 156 5 3 HELIX 6 6 LEU A 157 LEU A 164 1 8 HELIX 7 7 ASP A 165 LYS A 168 5 4 HELIX 8 8 ASP A 180 LEU A 185 5 6 HELIX 9 9 SER A 219 ARG A 227 1 9 SHEET 1 A 2 ASP A 32 ILE A 33 0 SHEET 2 A 2 THR A 108 VAL A 109 1 O THR A 108 N ILE A 33 SHEET 1 B10 LYS A 39 TYR A 40 0 SHEET 2 B10 LYS A 257 ALA A 258 1 O ALA A 258 N LYS A 39 SHEET 3 B10 TYR A 191 GLY A 196 -1 N THR A 193 O LYS A 257 SHEET 4 B10 VAL A 207 LEU A 212 -1 O VAL A 207 N GLY A 196 SHEET 5 B10 LEU A 141 VAL A 150 1 N GLY A 145 O ILE A 210 SHEET 6 B10 ALA A 116 ASN A 124 -1 N LEU A 118 O ILE A 146 SHEET 7 B10 TYR A 88 TRP A 97 -1 N HIS A 94 O HIS A 119 SHEET 8 B10 PHE A 66 PHE A 70 -1 N VAL A 68 O PHE A 93 SHEET 9 B10 SER A 56 ASN A 61 -1 N LEU A 57 O GLU A 69 SHEET 10 B10 SER A 173 ASP A 175 -1 O ALA A 174 N ILE A 59 SHEET 1 C 6 LEU A 47 SER A 50 0 SHEET 2 C 6 VAL A 78 GLY A 81 -1 O VAL A 78 N SER A 50 SHEET 3 C 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 C 6 ALA A 116 ASN A 124 -1 O HIS A 119 N HIS A 94 SHEET 5 C 6 LEU A 141 VAL A 150 -1 O ILE A 146 N LEU A 118 SHEET 6 C 6 ILE A 216 VAL A 218 1 O ILE A 216 N PHE A 147 LINK NE2 HIS A 94 ZN ZN A 262 1555 1555 2.01 LINK NE2 HIS A 96 ZN ZN A 262 1555 1555 2.04 LINK ND1 HIS A 119 ZN ZN A 262 1555 1555 2.05 LINK ZN ZN A 262 NACAVZ4 A 263 1555 1555 1.98 LINK ZN ZN A 262 O BHOH A 570 1555 1555 1.90 CISPEP 1 SER A 29 PRO A 30 0 -0.14 CISPEP 2 PRO A 201 PRO A 202 0 10.83 SITE 1 AC1 5 HIS A 94 HIS A 96 HIS A 119 VZ4 A 263 SITE 2 AC1 5 HOH A 570 SITE 1 AC2 23 GLN A 92 HIS A 94 HIS A 96 HIS A 119 SITE 2 AC2 23 VAL A 121 PHE A 131 LEU A 141 LEU A 198 SITE 3 AC2 23 THR A 199 THR A 200 PRO A 201 PRO A 202 SITE 4 AC2 23 ZN A 262 GOL A 265 HOH A 458 HOH A 470 SITE 5 AC2 23 HOH A 488 HOH A 570 HOH A 571 HOH A 572 SITE 6 AC2 23 HOH A 573 HOH A 574 HOH A 578 SITE 1 AC3 7 TYR A 7 ASP A 243 TRP A 245 HOH A 545 SITE 2 AC3 7 HOH A 550 HOH A 580 HOH A 598 SITE 1 AC4 14 ASN A 62 HIS A 64 ALA A 65 ASN A 67 SITE 2 AC4 14 GLN A 92 HIS A 94 VZ4 A 263 HOH A 280 SITE 3 AC4 14 HOH A 285 HOH A 326 HOH A 329 HOH A 528 SITE 4 AC4 14 HOH A 572 HOH A 578 CRYST1 42.168 41.199 71.548 90.00 104.12 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023715 0.000000 0.005966 0.00000 SCALE2 0.000000 0.024272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014412 0.00000