PDB Short entry for 3P5N
HEADER    TRANSPORT PROTEIN                       09-OCT-10   3P5N              
TITLE     STRUCTURE AND MECHANISM OF THE S COMPONENT OF A BACTERIAL ECF         
TITLE    2 TRANSPORTER                                                          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: RIBOFLAVIN UPTAKE PROTEIN;                                 
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: RIBU;                                                       
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS;                          
SOURCE   3 ORGANISM_TAXID: 548473;                                              
SOURCE   4 STRAIN: TCH60;                                                       
SOURCE   5 GENE: HMPREF0772_2174;                                               
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID                               
KEYWDS    TRANSPORTER, ALPHA-HELICAL BUNDLE, TRANSPORT PROTEIN                  
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    P.ZHANG,J.WANG,Y.SHI                                                  
REVDAT   4   20-MAR-24 3P5N    1       REMARK                                   
REVDAT   3   08-NOV-17 3P5N    1       REMARK                                   
REVDAT   2   08-DEC-10 3P5N    1       JRNL                                     
REVDAT   1   03-NOV-10 3P5N    0                                                
JRNL        AUTH   P.ZHANG,J.WANG,Y.SHI                                         
JRNL        TITL   STRUCTURE AND MECHANISM OF THE S COMPONENT OF A BACTERIAL    
JRNL        TITL 2 ECF TRANSPORTER                                              
JRNL        REF    NATURE                        V. 468   717 2010              
JRNL        REFN                   ISSN 0028-0836                               
JRNL        PMID   20972419                                                     
JRNL        DOI    10.1038/NATURE09488                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    3.60 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.6_289                                       
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MLHL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 3.60                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 49.21                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.180                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 95.4                           
REMARK   3   NUMBER OF REFLECTIONS             : 6457                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.266                           
REMARK   3   R VALUE            (WORKING SET) : 0.265                           
REMARK   3   FREE R VALUE                     : 0.289                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.610                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 362                             
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 49.2148 -  5.1910    0.98     2170   143  0.2768 0.2763        
REMARK   3     2  5.1910 -  4.1209    0.98     2072   109  0.2166 0.2767        
REMARK   3     3  4.1209 -  3.6002    0.90     1853   110  0.2944 0.3870        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : 0.32                                          
REMARK   3   B_SOL              : 147.2                                         
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.640            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL             
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 142.7                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 9.07010                                              
REMARK   3    B22 (A**2) : 11.88410                                             
REMARK   3    B33 (A**2) : -20.95420                                            
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.039           2940                                  
REMARK   3   ANGLE     :  1.870           3936                                  
REMARK   3   CHIRALITY :  0.080            470                                  
REMARK   3   PLANARITY :  0.007            432                                  
REMARK   3   DIHEDRAL  : 22.346           1600                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : 1                                           
REMARK   3   NCS GROUP : 1                                                      
REMARK   3    NCS OPERATOR : 1                                                  
REMARK   3     REFERENCE SELECTION: CHAIN A AND (RESSEQ 10:141 OR RESSEQ        
REMARK   3                          153:188 )                                   
REMARK   3     SELECTION          : CHAIN B AND (RESSEQ 10:141 OR RESSEQ        
REMARK   3                          153:188 )                                   
REMARK   3     ATOM PAIRS NUMBER  : 1303                                        
REMARK   3     RMSD               : 0.028                                       
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: LIGAND RBF HAS HIGH REAL SPACE R VALUE    
REMARK   3  DUE TO THE HIGH B FACTOR.                                           
REMARK   4                                                                      
REMARK   4 3P5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-OCT-10.                  
REMARK 100 THE DEPOSITION ID IS D_1000061986.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 03-FEB-10; 03-FEB-10               
REMARK 200  TEMPERATURE           (KELVIN) : 100; 100                           
REMARK 200  PH                             : 8.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y; Y                               
REMARK 200  RADIATION SOURCE               : NSLS; NSLS                         
REMARK 200  BEAMLINE                       : X29A; X29A                         
REMARK 200  X-RAY GENERATOR MODEL          : NULL; NULL                         
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M; M                               
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0750; 0.9791, 0.9793, 0.9600     
REMARK 200  MONOCHROMATOR                  : NULL; NULL                         
REMARK 200  OPTICS                         : NULL; NULL                         
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD; CCD                           
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315; ADSC QUANTUM     
REMARK 200                                   315                                
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000                    
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 6783                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 3.600                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : 6.900                              
REMARK 200  R MERGE                    (I) : 0.06500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 9.8000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.60                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 3.73                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 7.00                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.83100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD                         
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD                          
REMARK 200 SOFTWARE USED: PHENIX                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 62.28                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.6, VAPOR DIFFUSION, HANGING DROP,   
REMARK 280  TEMPERATURE 298K. PH 8.6, VAPOR DIFFUSION, HANGING DROP,            
REMARK 280  TEMPERATURE 298K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       25.21700            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       57.70100            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       47.12200            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       57.70100            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       25.21700            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       47.12200            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 16970 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ASN A     2                                                      
REMARK 465     GLY A     3                                                      
REMARK 465     ARG A     4                                                      
REMARK 465     ARG A     5                                                      
REMARK 465     LYS A     6                                                      
REMARK 465     LEU A     7                                                      
REMARK 465     ASN A     8                                                      
REMARK 465     MET A     9                                                      
REMARK 465     ILE A   142                                                      
REMARK 465     PHE A   143                                                      
REMARK 465     ASN A   144                                                      
REMARK 465     LEU A   145                                                      
REMARK 465     ALA A   146                                                      
REMARK 465     ASP A   147                                                      
REMARK 465     ILE A   148                                                      
REMARK 465     ALA A   149                                                      
REMARK 465     ASN A   150                                                      
REMARK 465     ASN A   151                                                      
REMARK 465     LEU A   152                                                      
REMARK 465     ILE A   189                                                      
REMARK 465     MET B     1                                                      
REMARK 465     ASN B     2                                                      
REMARK 465     GLY B     3                                                      
REMARK 465     ARG B     4                                                      
REMARK 465     ARG B     5                                                      
REMARK 465     LYS B     6                                                      
REMARK 465     LEU B     7                                                      
REMARK 465     ASN B     8                                                      
REMARK 465     MET B     9                                                      
REMARK 465     ILE B   142                                                      
REMARK 465     PHE B   143                                                      
REMARK 465     ASN B   144                                                      
REMARK 465     LEU B   145                                                      
REMARK 465     ALA B   146                                                      
REMARK 465     ASP B   147                                                      
REMARK 465     ILE B   148                                                      
REMARK 465     ALA B   149                                                      
REMARK 465     ASN B   150                                                      
REMARK 465     ASN B   151                                                      
REMARK 465     LEU B   152                                                      
REMARK 465     ILE B   189                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     MET A 141    CG   SD   CE                                        
REMARK 470     LYS A 153    CG   CD   CE   NZ                                   
REMARK 470     ARG A 188    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     MET B 141    CG   SD   CE                                        
REMARK 470     LYS B 153    CG   CD   CE   NZ                                   
REMARK 470     ARG B 188    CG   CD   NE   CZ   NH1  NH2                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    ASN B   184     C    ARG B   188              2.18            
REMARK 500   O    ASN A   184     C    ARG A   188              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A  28       -7.18    -54.59                                   
REMARK 500    PRO A  34      154.02    -39.19                                   
REMARK 500    PHE A  37       -9.25     71.02                                   
REMARK 500    PRO A  39      151.13    -38.91                                   
REMARK 500    LEU A  44      113.97     78.48                                   
REMARK 500    PHE A  58     -138.37   -117.27                                   
REMARK 500    PHE A  77      -72.05    -74.57                                   
REMARK 500    SER A  78       33.19    -66.85                                   
REMARK 500    MET A  79      178.94    -56.95                                   
REMARK 500    ALA A 101       23.51    -71.19                                   
REMARK 500    ILE A 102      -49.16   -137.42                                   
REMARK 500    ASN A 105     -155.23    -68.18                                   
REMARK 500    ARG A 107     -162.32     55.40                                   
REMARK 500    SER A 108     -104.23   -129.08                                   
REMARK 500    PHE A 133       34.22    159.04                                   
REMARK 500    VAL A 134      -21.13   -155.93                                   
REMARK 500    ARG A 181       15.51    -60.58                                   
REMARK 500    ASN A 184      -91.93    -22.02                                   
REMARK 500    LYS A 187      -76.81   -142.79                                   
REMARK 500    LEU B  28       -8.96    -56.00                                   
REMARK 500    PRO B  34      153.61    -38.88                                   
REMARK 500    PHE B  37       -7.53     70.49                                   
REMARK 500    PRO B  39      150.76    -38.26                                   
REMARK 500    LEU B  44      114.54     78.10                                   
REMARK 500    PHE B  58     -138.61   -118.97                                   
REMARK 500    PHE B  77      -71.61    -74.73                                   
REMARK 500    SER B  78       33.52    -67.31                                   
REMARK 500    MET B  79      178.95    -56.80                                   
REMARK 500    ALA B 101       22.35    -72.01                                   
REMARK 500    ILE B 102      -51.34   -135.80                                   
REMARK 500    ASN B 105     -155.58    -67.83                                   
REMARK 500    ARG B 107     -162.80     56.12                                   
REMARK 500    SER B 108     -104.30   -129.32                                   
REMARK 500    PHE B 133       35.30    159.64                                   
REMARK 500    VAL B 134      -22.22   -157.15                                   
REMARK 500    ARG B 181       14.86    -60.61                                   
REMARK 500    ASN B 184      -91.57    -22.04                                   
REMARK 500    LYS B 187      -77.24   -142.75                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 LEU A  138     TYR A  139                  149.02                    
REMARK 500 SER A  158     GLY A  159                  149.56                    
REMARK 500 LEU B  138     TYR B  139                  148.91                    
REMARK 500 SER B  158     GLY B  159                  149.84                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RBF A 190                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RBF B 190                 
DBREF  3P5N A    1   189  UNP    C2GB05   C2GB05_STAAU     1    189             
DBREF  3P5N B    1   189  UNP    C2GB05   C2GB05_STAAU     1    189             
SEQRES   1 A  189  MET ASN GLY ARG ARG LYS LEU ASN MET GLN GLN ASN LYS          
SEQRES   2 A  189  ARG LEU ILE THR ILE SER MET LEU SER ALA ILE ALA PHE          
SEQRES   3 A  189  VAL LEU THR PHE ILE LYS PHE PRO ILE PRO PHE LEU PRO          
SEQRES   4 A  189  PRO TYR LEU THR LEU ASP PHE SER ASP VAL PRO SER LEU          
SEQRES   5 A  189  LEU ALA THR PHE THR PHE GLY PRO VAL ALA GLY ILE ILE          
SEQRES   6 A  189  VAL ALA LEU VAL LYS ASN LEU LEU ASN TYR LEU PHE SER          
SEQRES   7 A  189  MET GLY ASP PRO VAL GLY PRO PHE ALA ASN PHE LEU ALA          
SEQRES   8 A  189  GLY ALA SER PHE LEU LEU THR ALA TYR ALA ILE TYR LYS          
SEQRES   9 A  189  ASN LYS ARG SER THR LYS SER LEU ILE THR GLY LEU ILE          
SEQRES  10 A  189  ILE ALA THR ILE VAL MET THR ILE VAL LEU SER ILE LEU          
SEQRES  11 A  189  ASN TYR PHE VAL LEU LEU PRO LEU TYR GLY MET ILE PHE          
SEQRES  12 A  189  ASN LEU ALA ASP ILE ALA ASN ASN LEU LYS VAL ILE ILE          
SEQRES  13 A  189  VAL SER GLY ILE ILE PRO PHE ASN ILE ILE LYS GLY ILE          
SEQRES  14 A  189  VAL ILE SER ILE VAL PHE ILE LEU LEU TYR ARG ARG LEU          
SEQRES  15 A  189  ALA ASN PHE LEU LYS ARG ILE                                  
SEQRES   1 B  189  MET ASN GLY ARG ARG LYS LEU ASN MET GLN GLN ASN LYS          
SEQRES   2 B  189  ARG LEU ILE THR ILE SER MET LEU SER ALA ILE ALA PHE          
SEQRES   3 B  189  VAL LEU THR PHE ILE LYS PHE PRO ILE PRO PHE LEU PRO          
SEQRES   4 B  189  PRO TYR LEU THR LEU ASP PHE SER ASP VAL PRO SER LEU          
SEQRES   5 B  189  LEU ALA THR PHE THR PHE GLY PRO VAL ALA GLY ILE ILE          
SEQRES   6 B  189  VAL ALA LEU VAL LYS ASN LEU LEU ASN TYR LEU PHE SER          
SEQRES   7 B  189  MET GLY ASP PRO VAL GLY PRO PHE ALA ASN PHE LEU ALA          
SEQRES   8 B  189  GLY ALA SER PHE LEU LEU THR ALA TYR ALA ILE TYR LYS          
SEQRES   9 B  189  ASN LYS ARG SER THR LYS SER LEU ILE THR GLY LEU ILE          
SEQRES  10 B  189  ILE ALA THR ILE VAL MET THR ILE VAL LEU SER ILE LEU          
SEQRES  11 B  189  ASN TYR PHE VAL LEU LEU PRO LEU TYR GLY MET ILE PHE          
SEQRES  12 B  189  ASN LEU ALA ASP ILE ALA ASN ASN LEU LYS VAL ILE ILE          
SEQRES  13 B  189  VAL SER GLY ILE ILE PRO PHE ASN ILE ILE LYS GLY ILE          
SEQRES  14 B  189  VAL ILE SER ILE VAL PHE ILE LEU LEU TYR ARG ARG LEU          
SEQRES  15 B  189  ALA ASN PHE LEU LYS ARG ILE                                  
HET    RBF  A 190      27                                                       
HET    RBF  B 190      27                                                       
HETNAM     RBF RIBOFLAVIN                                                       
HETSYN     RBF RIBOFLAVINE; VITAMIN B2                                          
FORMUL   3  RBF    2(C17 H20 N4 O6)                                             
HELIX    1   1 GLN A   10  LEU A   28  1                                  19    
HELIX    2   2 ASP A   45  SER A   47  5                                   3    
HELIX    3   3 ASP A   48  PHE A   56  1                                   9    
HELIX    4   4 GLY A   59  SER A   78  1                                  20    
HELIX    5   5 VAL A   83  LYS A  104  1                                  22    
HELIX    6   6 SER A  108  TYR A  132  1                                  25    
HELIX    7   7 LEU A  136  MET A  141  1                                   6    
HELIX    8   8 LYS A  153  ARG A  181  1                                  29    
HELIX    9   9 LEU A  182  LYS A  187  1                                   6    
HELIX   10  10 GLN B   10  THR B   29  1                                  20    
HELIX   11  11 ASP B   48  PHE B   56  1                                   9    
HELIX   12  12 GLY B   59  SER B   78  1                                  20    
HELIX   13  13 VAL B   83  LYS B  104  1                                  22    
HELIX   14  14 SER B  108  TYR B  132  1                                  25    
HELIX   15  15 LEU B  136  MET B  141  1                                   6    
HELIX   16  16 LYS B  153  ARG B  181  1                                  29    
HELIX   17  17 LEU B  182  LYS B  187  1                                   6    
SITE     1 AC1 16 LYS A  32  TYR A  41  LEU A  42  THR A  43                    
SITE     2 AC1 16 LEU A  44  ASP A  81  GLY A  84  PRO A  85                    
SITE     3 AC1 16 ALA A  87  ALA A  91  LEU A 127  ASN A 131                    
SITE     4 AC1 16 LEU A 138  PHE A 163  ASN A 164  LYS A 167                    
SITE     1 AC2 14 TYR B  41  LEU B  42  THR B  43  ASP B  81                    
SITE     2 AC2 14 GLY B  84  ALA B  87  ASN B  88  ALA B  91                    
SITE     3 AC2 14 LEU B 127  ASN B 131  LEU B 138  PHE B 163                    
SITE     4 AC2 14 ASN B 164  LYS B 167                                          
CRYST1   50.434   94.244  115.402  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.019828  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.010611  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008665        0.00000