PDB Short entry for 3PJV HEADER LYASE 10-NOV-10 3PJV TITLE STRUCTURE OF PSEUDOMONAS FLUORESCENCE LAPD PERIPLASMIC DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC DIMERIC GMP BINDING PROTEIN; COMPND 3 CHAIN: D, F; COMPND 4 FRAGMENT: UNP RESIDUES 22-151; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 205922; SOURCE 4 STRAIN: PF0-1; SOURCE 5 GENE: LAPD, PFL01_0131; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BINDING PROTEIN, LAPG, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SONDERMANN,M.V.A.S.NAVARRO,D.CHATTERJEE REVDAT 2 23-FEB-11 3PJV 1 JRNL REVDAT 1 09-FEB-11 3PJV 0 JRNL AUTH M.V.NAVARRO,P.D.NEWELL,P.V.KRASTEVA,D.CHATTERJEE,D.R.MADDEN, JRNL AUTH 2 G.A.O'TOOLE,H.SONDERMANN JRNL TITL STRUCTURAL BASIS FOR C-DI-GMP-MEDIATED INSIDE-OUT SIGNALING JRNL TITL 2 CONTROLLING PERIPLASMIC PROTEOLYSIS. JRNL REF PLOS BIOL. V. 9 E1000 2011 JRNL REFN ISSN 1544-9173 JRNL PMID 21304926 JRNL DOI 10.1371/JOURNAL.PBIO.1000588 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 31705 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.310 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.0844 - 4.2687 0.98 2316 156 0.1983 0.2029 REMARK 3 2 4.2687 - 3.3897 1.00 2232 151 0.1792 0.2027 REMARK 3 3 3.3897 - 2.9616 1.00 2184 146 0.2093 0.2251 REMARK 3 4 2.9616 - 2.6910 0.99 2198 148 0.2080 0.2422 REMARK 3 5 2.6910 - 2.4982 0.99 2161 145 0.2035 0.2554 REMARK 3 6 2.4982 - 2.3510 0.99 2141 145 0.2045 0.2189 REMARK 3 7 2.3510 - 2.2333 0.99 2129 143 0.1928 0.2192 REMARK 3 8 2.2333 - 2.1361 0.99 2152 145 0.2069 0.2267 REMARK 3 9 2.1361 - 2.0539 0.99 2111 142 0.2040 0.2330 REMARK 3 10 2.0539 - 1.9830 0.99 2133 144 0.2051 0.2503 REMARK 3 11 1.9830 - 1.9210 0.96 2067 139 0.2115 0.2062 REMARK 3 12 1.9210 - 1.8661 0.94 2027 136 0.2469 0.2736 REMARK 3 13 1.8661 - 1.8170 0.93 1985 134 0.2718 0.3200 REMARK 3 14 1.8170 - 1.7727 0.87 1869 126 0.2886 0.3285 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 60.63 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.61090 REMARK 3 B22 (A**2) : -9.52140 REMARK 3 B33 (A**2) : 0.91050 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2029 REMARK 3 ANGLE : 0.974 2785 REMARK 3 CHIRALITY : 0.064 333 REMARK 3 PLANARITY : 0.004 358 REMARK 3 DIHEDRAL : 13.225 737 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN D AND RESID 24:71) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7450 43.7560 63.5379 REMARK 3 T TENSOR REMARK 3 T11: 0.1038 T22: 0.1078 REMARK 3 T33: 0.1084 T12: 0.0072 REMARK 3 T13: 0.0150 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.7652 L22: 1.7327 REMARK 3 L33: 0.9379 L12: 0.5031 REMARK 3 L13: -0.0606 L23: 0.4483 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: -0.2536 S13: 0.0542 REMARK 3 S21: 0.1664 S22: -0.1823 S23: 0.1453 REMARK 3 S31: 0.0772 S32: -0.2000 S33: 0.0803 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN D AND RESID 72:95) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4127 44.8972 61.1383 REMARK 3 T TENSOR REMARK 3 T11: 0.0904 T22: 0.1012 REMARK 3 T33: 0.2055 T12: -0.0135 REMARK 3 T13: 0.0284 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 1.0183 L22: 3.2328 REMARK 3 L33: 0.5117 L12: 0.1358 REMARK 3 L13: -0.2009 L23: -0.2994 REMARK 3 S TENSOR REMARK 3 S11: 0.0772 S12: 0.0634 S13: -0.2709 REMARK 3 S21: -0.0951 S22: -0.1704 S23: -0.9266 REMARK 3 S31: -0.0000 S32: 0.0306 S33: 0.1054 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN D AND RESID 100:114) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0911 17.5439 66.6853 REMARK 3 T TENSOR REMARK 3 T11: 0.2833 T22: 0.1663 REMARK 3 T33: 0.2510 T12: 0.0743 REMARK 3 T13: 0.0459 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.3288 L22: 0.3976 REMARK 3 L33: 1.0125 L12: -0.0743 REMARK 3 L13: -0.1994 L23: 0.6351 REMARK 3 S TENSOR REMARK 3 S11: -0.3741 S12: 0.0118 S13: -0.0848 REMARK 3 S21: -0.0397 S22: 0.0734 S23: 0.3561 REMARK 3 S31: -0.0512 S32: -0.1223 S33: 0.2849 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN D AND RESID 115:126) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4012 35.7599 90.6582 REMARK 3 T TENSOR REMARK 3 T11: 0.2642 T22: 0.2411 REMARK 3 T33: 0.1335 T12: 0.0435 REMARK 3 T13: 0.0316 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.4998 L22: 0.3851 REMARK 3 L33: 0.0541 L12: -0.0986 REMARK 3 L13: -0.1274 L23: -0.1124 REMARK 3 S TENSOR REMARK 3 S11: -0.1454 S12: 0.1417 S13: -0.0899 REMARK 3 S21: 0.3315 S22: 0.0285 S23: 0.0131 REMARK 3 S31: 0.4690 S32: -0.0479 S33: 0.1683 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN D AND RESID 127:150) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9528 26.7677 71.1629 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.1474 REMARK 3 T33: 0.1487 T12: 0.0312 REMARK 3 T13: 0.0307 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.4433 L22: 1.2618 REMARK 3 L33: 1.5590 L12: -0.9240 REMARK 3 L13: -1.7042 L23: 1.3362 REMARK 3 S TENSOR REMARK 3 S11: -0.1416 S12: 0.0512 S13: 0.4135 REMARK 3 S21: 0.1902 S22: 0.2076 S23: -0.3513 REMARK 3 S31: 0.3234 S32: -0.1525 S33: -0.0504 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN F AND RESID 24:74) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1342 33.6947 76.9802 REMARK 3 T TENSOR REMARK 3 T11: 0.1296 T22: 0.1207 REMARK 3 T33: 0.0816 T12: 0.0022 REMARK 3 T13: -0.0002 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 1.0955 L22: 1.5442 REMARK 3 L33: 2.2491 L12: -0.5744 REMARK 3 L13: -1.0050 L23: 0.0784 REMARK 3 S TENSOR REMARK 3 S11: 0.1934 S12: 0.0968 S13: 0.3154 REMARK 3 S21: -0.0474 S22: 0.0120 S23: -0.2109 REMARK 3 S31: -0.1011 S32: -0.0155 S33: -0.1707 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN F AND RESID 75:99) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2338 27.5013 77.6095 REMARK 3 T TENSOR REMARK 3 T11: 0.1928 T22: 0.1986 REMARK 3 T33: 0.0763 T12: -0.0223 REMARK 3 T13: 0.0511 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.4275 L22: 0.3085 REMARK 3 L33: 1.8803 L12: -0.5388 REMARK 3 L13: -0.6811 L23: -0.0053 REMARK 3 S TENSOR REMARK 3 S11: -0.1873 S12: 0.2857 S13: -0.2848 REMARK 3 S21: -0.0214 S22: 0.0216 S23: -0.0362 REMARK 3 S31: 0.2999 S32: -0.5270 S33: 0.2167 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN F AND RESID 100:116) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4066 29.2659 50.5538 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.1311 REMARK 3 T33: 0.1629 T12: -0.0135 REMARK 3 T13: -0.0327 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 1.1539 L22: 1.5378 REMARK 3 L33: 0.3059 L12: 1.2038 REMARK 3 L13: 0.4011 L23: 0.6481 REMARK 3 S TENSOR REMARK 3 S11: 0.0838 S12: 0.0833 S13: -0.2305 REMARK 3 S21: 0.2116 S22: 0.0617 S23: -0.3233 REMARK 3 S31: 0.0326 S32: -0.0033 S33: -0.1598 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN F AND RESID 117:126) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5710 59.7431 64.1806 REMARK 3 T TENSOR REMARK 3 T11: 0.2663 T22: 0.1293 REMARK 3 T33: 0.2057 T12: -0.0416 REMARK 3 T13: -0.0579 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.4556 L22: 0.2022 REMARK 3 L33: 1.5969 L12: 0.5535 REMARK 3 L13: 0.5059 L23: 0.1042 REMARK 3 S TENSOR REMARK 3 S11: 0.1704 S12: 0.1424 S13: -0.2847 REMARK 3 S21: 0.1539 S22: 0.0364 S23: -0.7222 REMARK 3 S31: -0.3837 S32: 0.1425 S33: -0.2490 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN F AND RESID 127:150) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2687 35.7817 58.7191 REMARK 3 T TENSOR REMARK 3 T11: 0.0583 T22: 0.0373 REMARK 3 T33: 0.0064 T12: -0.0209 REMARK 3 T13: -0.0055 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.0977 L22: 1.1788 REMARK 3 L33: 1.1626 L12: -0.2214 REMARK 3 L13: 0.2164 L23: 0.0314 REMARK 3 S TENSOR REMARK 3 S11: 0.0926 S12: -0.0013 S13: -0.1138 REMARK 3 S21: 0.0809 S22: -0.0191 S23: -0.2775 REMARK 3 S31: 0.1876 S32: -0.1371 S33: -0.0634 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PJV COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-10. REMARK 100 THE RCSB ID CODE IS RCSB062460. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9769 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32517 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.773 REMARK 200 RESOLUTION RANGE LOW (A) : 30.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG MONOMETHYL ETHER 2,000, 0.15 M REMARK 280 POTASSIUM BROMIDE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.74400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.20600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.70400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.20600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.74400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.70400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER D 22 REMARK 465 SER D 151 REMARK 465 SER F 22 REMARK 465 PHE F 23 REMARK 465 SER F 151 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE D 23 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH F 210 O HOH F 221 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PJT RELATED DB: PDB REMARK 900 RELATED ID: 3PJU RELATED DB: PDB REMARK 900 RELATED ID: 3PJW RELATED DB: PDB REMARK 900 RELATED ID: 3PJX RELATED DB: PDB DBREF 3PJV D 22 151 UNP Q3KK31 Q3KK31_PSEPF 22 151 DBREF 3PJV F 22 151 UNP Q3KK31 Q3KK31_PSEPF 22 151 SEQRES 1 D 130 SER PHE MSE VAL SER LEU GLU SER SER ARG THR GLN TYR SEQRES 2 D 130 VAL ASN GLN LEU ARG SER HIS ALA GLN ASP ALA ALA THR SEQRES 3 D 130 ALA LEU ALA LEU SER LEU THR PRO ASN ILE ASP ASP PRO SEQRES 4 D 130 ALA MSE VAL GLU LEU LEU VAL SER SER ILE PHE ASP SER SEQRES 5 D 130 GLY TYR TYR SER SER ILE ARG VAL VAL ASP LEU LYS THR SEQRES 6 D 130 ASP GLN THR ILE VAL GLU ARG ASN GLY ILE PRO ALA VAL SEQRES 7 D 130 THR ASN VAL PRO ASP TRP PHE VAL LYS LEU ILE GLY LEU SEQRES 8 D 130 GLU PRO ALA GLY GLY ASP ALA LEU VAL SER ARG GLY TRP SEQRES 9 D 130 GLU GLN ALA ALA ARG VAL GLU VAL VAL SER HIS PRO MSE SEQRES 10 D 130 PHE ALA LEU ALA LYS LEU TRP GLN SER ALA LEU GLY SER SEQRES 1 F 130 SER PHE MSE VAL SER LEU GLU SER SER ARG THR GLN TYR SEQRES 2 F 130 VAL ASN GLN LEU ARG SER HIS ALA GLN ASP ALA ALA THR SEQRES 3 F 130 ALA LEU ALA LEU SER LEU THR PRO ASN ILE ASP ASP PRO SEQRES 4 F 130 ALA MSE VAL GLU LEU LEU VAL SER SER ILE PHE ASP SER SEQRES 5 F 130 GLY TYR TYR SER SER ILE ARG VAL VAL ASP LEU LYS THR SEQRES 6 F 130 ASP GLN THR ILE VAL GLU ARG ASN GLY ILE PRO ALA VAL SEQRES 7 F 130 THR ASN VAL PRO ASP TRP PHE VAL LYS LEU ILE GLY LEU SEQRES 8 F 130 GLU PRO ALA GLY GLY ASP ALA LEU VAL SER ARG GLY TRP SEQRES 9 F 130 GLU GLN ALA ALA ARG VAL GLU VAL VAL SER HIS PRO MSE SEQRES 10 F 130 PHE ALA LEU ALA LYS LEU TRP GLN SER ALA LEU GLY SER MODRES 3PJV MSE D 24 MET SELENOMETHIONINE MODRES 3PJV MSE D 62 MET SELENOMETHIONINE MODRES 3PJV MSE D 138 MET SELENOMETHIONINE MODRES 3PJV MSE F 24 MET SELENOMETHIONINE MODRES 3PJV MSE F 62 MET SELENOMETHIONINE MODRES 3PJV MSE F 138 MET SELENOMETHIONINE HET MSE D 24 8 HET MSE D 62 8 HET MSE D 138 8 HET MSE F 24 8 HET MSE F 62 8 HET MSE F 138 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *304(H2 O) HELIX 1 1 SER D 26 THR D 54 1 29 HELIX 2 2 PRO D 55 ILE D 57 5 3 HELIX 3 3 ASP D 59 ASP D 72 1 14 HELIX 4 4 PRO D 103 GLY D 111 1 9 HELIX 5 5 PRO D 137 GLY D 150 1 14 HELIX 6 6 LEU F 27 THR F 54 1 28 HELIX 7 7 PRO F 55 ILE F 57 5 3 HELIX 8 8 ASP F 59 GLY F 74 1 16 HELIX 9 9 PRO F 103 GLY F 111 1 9 HELIX 10 10 PRO F 137 LEU F 149 1 13 SHEET 1 A 4 THR D 89 ASN D 94 0 SHEET 2 A 4 TYR D 76 ASP D 83 -1 N VAL D 81 O ILE D 90 SHEET 3 A 4 GLU F 126 SER F 135 -1 O GLU F 132 N ARG D 80 SHEET 4 A 4 ALA F 115 ARG F 123 -1 N ALA F 119 O VAL F 131 SHEET 1 B 4 GLY D 117 ARG D 123 0 SHEET 2 B 4 GLU D 126 SER D 135 -1 O GLU D 126 N ARG D 123 SHEET 3 B 4 TYR F 76 ASP F 83 -1 O ARG F 80 N GLU D 132 SHEET 4 B 4 GLN F 88 ASN F 94 -1 O ILE F 90 N VAL F 81 LINK C MSE D 24 N VAL D 25 1555 1555 1.33 LINK C ALA D 61 N MSE D 62 1555 1555 1.33 LINK C MSE D 62 N VAL D 63 1555 1555 1.33 LINK C PRO D 137 N MSE D 138 1555 1555 1.33 LINK C MSE D 138 N PHE D 139 1555 1555 1.33 LINK C MSE F 24 N VAL F 25 1555 1555 1.33 LINK C ALA F 61 N MSE F 62 1555 1555 1.33 LINK C MSE F 62 N VAL F 63 1555 1555 1.32 LINK C PRO F 137 N MSE F 138 1555 1555 1.33 LINK C MSE F 138 N PHE F 139 1555 1555 1.33 LINK C PHE D 23 N MSE D 24 1555 1555 1.33 CRYST1 41.488 71.408 110.412 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024103 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014004 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009057 0.00000