PDB Short entry for 3Q02 HEADER HYDROLASE INHIBITOR 15-DEC-10 3Q02 TITLE CRYSTAL STRUCTURE OF PLASMINOGEN ACTIVATOR INHIBITOR-1 IN A METASTABLE TITLE 2 ACTIVE CONFORMATION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMINOGEN ACTIVATOR INHIBITOR 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PAI, PAI-1, ENDOTHELIAL PLASMINOGEN ACTIVATOR INHIBITOR, COMPND 5 SERPIN E1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAI1, PLANH1, SERPINE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) ROSETTA 2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-24D KEYWDS PAI-1, ACTIVE SERPIN, SERINE PROTEASE INHIBITOR, METASTABLE KEYWDS 2 CONFORMATION, HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR J.K.JENSEN,J.P.MORTH REVDAT 5 13-SEP-23 3Q02 1 REMARK SEQADV LINK REVDAT 4 08-NOV-17 3Q02 1 AUTHOR REMARK REVDAT 3 07-SEP-11 3Q02 1 JRNL REVDAT 2 10-AUG-11 3Q02 1 JRNL VERSN REVDAT 1 22-JUN-11 3Q02 0 JRNL AUTH J.K.JENSEN,L.C.THOMPSON,J.C.BUCCI,P.NISSEN,P.G.GETTINS, JRNL AUTH 2 C.B.PETERSON,P.A.ANDREASEN,J.P.MORTH JRNL TITL CRYSTAL STRUCTURE OF PLASMINOGEN ACTIVATOR INHIBITOR-1 IN AN JRNL TITL 2 ACTIVE CONFORMATION WITH NORMAL THERMODYNAMIC STABILITY. JRNL REF J.BIOL.CHEM. V. 286 29709 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21697084 JRNL DOI 10.1074/JBC.M111.236554 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 40487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.9447 - 5.5247 0.99 2839 150 0.1603 0.1867 REMARK 3 2 5.5247 - 4.3929 0.98 2762 145 0.1533 0.1950 REMARK 3 3 4.3929 - 3.8399 0.99 2792 147 0.1630 0.1896 REMARK 3 4 3.8399 - 3.4899 1.00 2772 146 0.1860 0.2364 REMARK 3 5 3.4899 - 3.2403 0.98 2728 144 0.2061 0.2423 REMARK 3 6 3.2403 - 3.0496 0.99 2739 144 0.2177 0.2721 REMARK 3 7 3.0496 - 2.8971 0.99 2756 145 0.2249 0.2894 REMARK 3 8 2.8971 - 2.7712 1.00 2752 145 0.2391 0.3260 REMARK 3 9 2.7712 - 2.6646 1.00 2773 146 0.2468 0.3317 REMARK 3 10 2.6646 - 2.5728 0.99 2727 144 0.2643 0.3359 REMARK 3 11 2.5728 - 2.4924 0.96 2659 139 0.2686 0.3279 REMARK 3 12 2.4924 - 2.4212 0.98 2742 143 0.2614 0.3644 REMARK 3 13 2.4212 - 2.3575 0.99 2745 145 0.2649 0.2922 REMARK 3 14 2.3575 - 2.3000 0.97 2677 141 0.2705 0.3197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 50.84 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.26300 REMARK 3 B22 (A**2) : 3.26220 REMARK 3 B33 (A**2) : -5.52520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 10.92550 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5913 REMARK 3 ANGLE : 1.026 8010 REMARK 3 CHIRALITY : 0.070 892 REMARK 3 PLANARITY : 0.004 1035 REMARK 3 DIHEDRAL : 15.636 2190 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A (RESID 4:176 OR RESID 207:379) REMARK 3 ORIGIN FOR THE GROUP (A): 53.1720 29.7569 -2.3815 REMARK 3 T TENSOR REMARK 3 T11: 0.3629 T22: 0.2279 REMARK 3 T33: 0.3277 T12: 0.0318 REMARK 3 T13: 0.0724 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.4579 L22: 3.2858 REMARK 3 L33: 4.4689 L12: 1.0486 REMARK 3 L13: -0.7299 L23: -2.8996 REMARK 3 S TENSOR REMARK 3 S11: 0.1071 S12: 0.0468 S13: 0.1723 REMARK 3 S21: 0.5504 S22: 0.3271 S23: 0.2779 REMARK 3 S31: -0.6532 S32: -0.1433 S33: -0.3883 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A RESID 177:206 REMARK 3 ORIGIN FOR THE GROUP (A): 39.3161 41.0906 17.4875 REMARK 3 T TENSOR REMARK 3 T11: 2.3863 T22: 0.4203 REMARK 3 T33: 1.2661 T12: 0.6088 REMARK 3 T13: 1.3992 T23: 0.3356 REMARK 3 L TENSOR REMARK 3 L11: 2.6050 L22: 1.6984 REMARK 3 L33: 6.8206 L12: -1.1803 REMARK 3 L13: -1.6542 L23: -1.8439 REMARK 3 S TENSOR REMARK 3 S11: 1.4151 S12: 0.2665 S13: 1.4051 REMARK 3 S21: 0.7076 S22: 0.5046 S23: 0.0814 REMARK 3 S31: -3.5806 S32: -0.7967 S33: -2.0155 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B (RESID 1:176 OR RESID 207:379) REMARK 3 ORIGIN FOR THE GROUP (A): 45.5939 1.6756 33.1365 REMARK 3 T TENSOR REMARK 3 T11: 0.3216 T22: 0.3102 REMARK 3 T33: 0.1839 T12: 0.1342 REMARK 3 T13: -0.0151 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.7748 L22: 1.8061 REMARK 3 L33: 1.8950 L12: 0.5807 REMARK 3 L13: -0.7563 L23: -0.1920 REMARK 3 S TENSOR REMARK 3 S11: -0.1728 S12: -0.3985 S13: -0.0215 REMARK 3 S21: 0.1434 S22: 0.0812 S23: -0.1498 REMARK 3 S31: 0.2276 S32: 0.2984 S33: 0.0827 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B RESID 177:206 REMARK 3 ORIGIN FOR THE GROUP (A): 70.6950 -2.3408 24.3539 REMARK 3 T TENSOR REMARK 3 T11: 0.2963 T22: 0.9580 REMARK 3 T33: 0.8872 T12: 0.1915 REMARK 3 T13: 0.0306 T23: -0.1017 REMARK 3 L TENSOR REMARK 3 L11: 0.1941 L22: 0.6111 REMARK 3 L33: 0.3772 L12: 0.3362 REMARK 3 L13: 0.0571 L23: -0.0060 REMARK 3 S TENSOR REMARK 3 S11: -0.2122 S12: -0.0786 S13: -0.4134 REMARK 3 S21: -0.1654 S22: 0.2360 S23: -0.6139 REMARK 3 S31: 0.1521 S32: 0.3163 S33: 0.0244 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3Q02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063024. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.62 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DVM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 - 3.0 M NACL, 5 MM MES PH 6.1, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.58600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 GLY A 332 REMARK 465 THR A 333 REMARK 465 VAL A 334 REMARK 465 ALA A 335 REMARK 465 SER A 336 REMARK 465 SER A 337 REMARK 465 SER A 338 REMARK 465 THR A 339 REMARK 465 ALA A 340 REMARK 465 VAL A 341 REMARK 465 ILE A 342 REMARK 465 VAL A 343 REMARK 465 SER A 344 REMARK 465 ALA A 345 REMARK 465 ARG A 346 REMARK 465 MET A 347 REMARK 465 GLY B 332 REMARK 465 THR B 333 REMARK 465 VAL B 334 REMARK 465 ALA B 335 REMARK 465 SER B 336 REMARK 465 SER B 337 REMARK 465 SER B 338 REMARK 465 THR B 339 REMARK 465 ALA B 340 REMARK 465 VAL B 341 REMARK 465 ILE B 342 REMARK 465 VAL B 343 REMARK 465 SER B 344 REMARK 465 ALA B 345 REMARK 465 ARG B 346 REMARK 465 MET B 347 REMARK 465 ALA B 348 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 27 55.03 -116.82 REMARK 500 PRO A 85 -5.45 -54.42 REMARK 500 GLU A 90 59.99 -95.64 REMARK 500 SER A 182 10.94 -58.92 REMARK 500 THR A 232 -39.71 -130.35 REMARK 500 MET A 354 50.19 -102.38 REMARK 500 ASP A 355 33.88 -87.02 REMARK 500 SER B 27 50.87 -109.76 REMARK 500 TRP B 86 24.47 41.75 REMARK 500 LYS B 191 179.33 -57.17 REMARK 500 GLN B 204 134.73 -170.41 REMARK 500 ASN B 206 -179.10 -175.47 REMARK 500 ARG B 287 -71.95 -52.92 REMARK 500 MET B 295 67.92 -102.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 381 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 212 OE2 REMARK 620 2 GLU A 212 OE1 50.8 REMARK 620 3 VAL B 1 N 82.5 113.4 REMARK 620 4 HIS B 2 N 148.8 158.0 72.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 380 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 438 O REMARK 620 2 HIS B 229 NE2 128.5 REMARK 620 3 HOH B 418 O 128.3 101.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 381 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 382 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 383 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1B3K RELATED DB: PDB REMARK 900 THE ACTIVE CONFORMATION OF PLASMINOGEN ACTIVATOR INHIBITOR 1 REMARK 900 RELATED ID: 1DB2 RELATED DB: PDB REMARK 900 PLASMINOGEN ACTIVATOR INHIBITOR 1 REMARK 900 RELATED ID: 1DVM RELATED DB: PDB REMARK 900 STRUCTURES OF ACTIVE AND LATENT PAI-1: A POSSIBLE STABILIZING ROLE REMARK 900 FOR CHLORIDE IONS DBREF 3Q02 A 1 379 UNP P05121 PAI1_HUMAN 24 402 DBREF 3Q02 B 1 379 UNP P05121 PAI1_HUMAN 24 402 SEQADV 3Q02 PHE A 175 UNP P05121 TRP 198 ENGINEERED MUTATION SEQADV 3Q02 PHE B 175 UNP P05121 TRP 198 ENGINEERED MUTATION SEQRES 1 A 379 VAL HIS HIS PRO PRO SER TYR VAL ALA HIS LEU ALA SER SEQRES 2 A 379 ASP PHE GLY VAL ARG VAL PHE GLN GLN VAL ALA GLN ALA SEQRES 3 A 379 SER LYS ASP ARG ASN VAL VAL PHE SER PRO TYR GLY VAL SEQRES 4 A 379 ALA SER VAL LEU ALA MET LEU GLN LEU THR THR GLY GLY SEQRES 5 A 379 GLU THR GLN GLN GLN ILE GLN ALA ALA MET GLY PHE LYS SEQRES 6 A 379 ILE ASP ASP LYS GLY MET ALA PRO ALA LEU ARG HIS LEU SEQRES 7 A 379 TYR LYS GLU LEU MET GLY PRO TRP ASN LYS ASP GLU ILE SEQRES 8 A 379 SER THR THR ASP ALA ILE PHE VAL GLN ARG ASP LEU LYS SEQRES 9 A 379 LEU VAL GLN GLY PHE MET PRO HIS PHE PHE ARG LEU PHE SEQRES 10 A 379 ARG SER THR VAL LYS GLN VAL ASP PHE SER GLU VAL GLU SEQRES 11 A 379 ARG ALA ARG PHE ILE ILE ASN ASP TRP VAL LYS THR HIS SEQRES 12 A 379 THR LYS GLY MET ILE SER ASN LEU LEU GLY LYS GLY ALA SEQRES 13 A 379 VAL ASP GLN LEU THR ARG LEU VAL LEU VAL ASN ALA LEU SEQRES 14 A 379 TYR PHE ASN GLY GLN PHE LYS THR PRO PHE PRO ASP SER SEQRES 15 A 379 SER THR HIS ARG ARG LEU PHE HIS LYS SER ASP GLY SER SEQRES 16 A 379 THR VAL SER VAL PRO MET MET ALA GLN THR ASN LYS PHE SEQRES 17 A 379 ASN TYR THR GLU PHE THR THR PRO ASP GLY HIS TYR TYR SEQRES 18 A 379 ASP ILE LEU GLU LEU PRO TYR HIS GLY ASP THR LEU SER SEQRES 19 A 379 MET PHE ILE ALA ALA PRO TYR GLU LYS GLU VAL PRO LEU SEQRES 20 A 379 SER ALA LEU THR ASN ILE LEU SER ALA GLN LEU ILE SER SEQRES 21 A 379 HIS TRP LYS GLY ASN MET THR ARG LEU PRO ARG LEU LEU SEQRES 22 A 379 VAL LEU PRO LYS PHE SER LEU GLU THR GLU VAL ASP LEU SEQRES 23 A 379 ARG LYS PRO LEU GLU ASN LEU GLY MET THR ASP MET PHE SEQRES 24 A 379 ARG GLN PHE GLN ALA ASP PHE THR SER LEU SER ASP GLN SEQRES 25 A 379 GLU PRO LEU HIS VAL ALA GLN ALA LEU GLN LYS VAL LYS SEQRES 26 A 379 ILE GLU VAL ASN GLU SER GLY THR VAL ALA SER SER SER SEQRES 27 A 379 THR ALA VAL ILE VAL SER ALA ARG MET ALA PRO GLU GLU SEQRES 28 A 379 ILE ILE MET ASP ARG PRO PHE LEU PHE VAL VAL ARG HIS SEQRES 29 A 379 ASN PRO THR GLY THR VAL LEU PHE MET GLY GLN VAL MET SEQRES 30 A 379 GLU PRO SEQRES 1 B 379 VAL HIS HIS PRO PRO SER TYR VAL ALA HIS LEU ALA SER SEQRES 2 B 379 ASP PHE GLY VAL ARG VAL PHE GLN GLN VAL ALA GLN ALA SEQRES 3 B 379 SER LYS ASP ARG ASN VAL VAL PHE SER PRO TYR GLY VAL SEQRES 4 B 379 ALA SER VAL LEU ALA MET LEU GLN LEU THR THR GLY GLY SEQRES 5 B 379 GLU THR GLN GLN GLN ILE GLN ALA ALA MET GLY PHE LYS SEQRES 6 B 379 ILE ASP ASP LYS GLY MET ALA PRO ALA LEU ARG HIS LEU SEQRES 7 B 379 TYR LYS GLU LEU MET GLY PRO TRP ASN LYS ASP GLU ILE SEQRES 8 B 379 SER THR THR ASP ALA ILE PHE VAL GLN ARG ASP LEU LYS SEQRES 9 B 379 LEU VAL GLN GLY PHE MET PRO HIS PHE PHE ARG LEU PHE SEQRES 10 B 379 ARG SER THR VAL LYS GLN VAL ASP PHE SER GLU VAL GLU SEQRES 11 B 379 ARG ALA ARG PHE ILE ILE ASN ASP TRP VAL LYS THR HIS SEQRES 12 B 379 THR LYS GLY MET ILE SER ASN LEU LEU GLY LYS GLY ALA SEQRES 13 B 379 VAL ASP GLN LEU THR ARG LEU VAL LEU VAL ASN ALA LEU SEQRES 14 B 379 TYR PHE ASN GLY GLN PHE LYS THR PRO PHE PRO ASP SER SEQRES 15 B 379 SER THR HIS ARG ARG LEU PHE HIS LYS SER ASP GLY SER SEQRES 16 B 379 THR VAL SER VAL PRO MET MET ALA GLN THR ASN LYS PHE SEQRES 17 B 379 ASN TYR THR GLU PHE THR THR PRO ASP GLY HIS TYR TYR SEQRES 18 B 379 ASP ILE LEU GLU LEU PRO TYR HIS GLY ASP THR LEU SER SEQRES 19 B 379 MET PHE ILE ALA ALA PRO TYR GLU LYS GLU VAL PRO LEU SEQRES 20 B 379 SER ALA LEU THR ASN ILE LEU SER ALA GLN LEU ILE SER SEQRES 21 B 379 HIS TRP LYS GLY ASN MET THR ARG LEU PRO ARG LEU LEU SEQRES 22 B 379 VAL LEU PRO LYS PHE SER LEU GLU THR GLU VAL ASP LEU SEQRES 23 B 379 ARG LYS PRO LEU GLU ASN LEU GLY MET THR ASP MET PHE SEQRES 24 B 379 ARG GLN PHE GLN ALA ASP PHE THR SER LEU SER ASP GLN SEQRES 25 B 379 GLU PRO LEU HIS VAL ALA GLN ALA LEU GLN LYS VAL LYS SEQRES 26 B 379 ILE GLU VAL ASN GLU SER GLY THR VAL ALA SER SER SER SEQRES 27 B 379 THR ALA VAL ILE VAL SER ALA ARG MET ALA PRO GLU GLU SEQRES 28 B 379 ILE ILE MET ASP ARG PRO PHE LEU PHE VAL VAL ARG HIS SEQRES 29 B 379 ASN PRO THR GLY THR VAL LEU PHE MET GLY GLN VAL MET SEQRES 30 B 379 GLU PRO HET CL A 380 1 HET ZN B 380 1 HET ZN B 381 1 HET CL B 382 1 HET EDO B 383 4 HETNAM CL CHLORIDE ION HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CL 2(CL 1-) FORMUL 4 ZN 2(ZN 2+) FORMUL 7 EDO C2 H6 O2 FORMUL 8 HOH *130(H2 O) HELIX 1 1 SER A 6 GLN A 25 1 20 HELIX 2 2 SER A 35 THR A 50 1 16 HELIX 3 3 GLY A 51 GLY A 63 1 13 HELIX 4 4 GLY A 70 MET A 83 1 14 HELIX 5 5 GLY A 84 LYS A 88 5 5 HELIX 6 6 GLY A 108 ARG A 118 1 11 HELIX 7 7 GLU A 128 HIS A 143 1 16 HELIX 8 8 PRO A 180 THR A 184 5 5 HELIX 9 9 LEU A 247 ASN A 252 1 6 HELIX 10 10 SER A 255 MET A 266 1 12 HELIX 11 11 LEU A 286 LEU A 293 1 8 HELIX 12 12 THR A 296 ARG A 300 5 5 HELIX 13 13 HIS B 3 SER B 27 1 25 HELIX 14 14 SER B 35 GLN B 47 1 13 HELIX 15 15 GLY B 51 GLY B 63 1 13 HELIX 16 16 GLY B 70 MET B 83 1 14 HELIX 17 17 GLY B 108 ARG B 118 1 11 HELIX 18 18 GLU B 128 HIS B 143 1 16 HELIX 19 19 PRO B 180 THR B 184 5 5 HELIX 20 20 LEU B 247 ASN B 252 1 6 HELIX 21 21 SER B 255 ASN B 265 1 11 HELIX 22 22 LEU B 286 LEU B 293 1 8 HELIX 23 23 THR B 296 ARG B 300 5 5 SHEET 1 A 7 VAL A 32 PHE A 34 0 SHEET 2 A 7 THR A 369 VAL A 376 -1 O MET A 373 N PHE A 34 SHEET 3 A 7 PHE A 358 HIS A 364 -1 N HIS A 364 O THR A 369 SHEET 4 A 7 LEU A 233 PRO A 240 -1 N ALA A 238 O LEU A 359 SHEET 5 A 7 TYR A 220 PRO A 227 -1 N LEU A 226 O MET A 235 SHEET 6 A 7 THR A 196 THR A 214 -1 N THR A 211 O ILE A 223 SHEET 7 A 7 HIS A 185 HIS A 190 -1 N ARG A 187 O VAL A 199 SHEET 1 B 8 VAL A 32 PHE A 34 0 SHEET 2 B 8 THR A 369 VAL A 376 -1 O MET A 373 N PHE A 34 SHEET 3 B 8 PHE A 358 HIS A 364 -1 N HIS A 364 O THR A 369 SHEET 4 B 8 LEU A 233 PRO A 240 -1 N ALA A 238 O LEU A 359 SHEET 5 B 8 TYR A 220 PRO A 227 -1 N LEU A 226 O MET A 235 SHEET 6 B 8 THR A 196 THR A 214 -1 N THR A 211 O ILE A 223 SHEET 7 B 8 THR A 267 PRO A 276 -1 O LEU A 269 N PHE A 208 SHEET 8 B 8 GLU A 350 ILE A 353 1 O ILE A 352 N LEU A 272 SHEET 1 C 5 LYS A 122 VAL A 124 0 SHEET 2 C 5 ILE A 91 GLN A 100 1 N VAL A 99 O LYS A 122 SHEET 3 C 5 LEU A 163 PHE A 171 -1 O VAL A 164 N PHE A 98 SHEET 4 C 5 GLN A 319 VAL A 328 1 O GLN A 319 N LEU A 165 SHEET 5 C 5 PHE A 278 ASP A 285 -1 N VAL A 284 O GLN A 322 SHEET 1 D 7 VAL B 32 PHE B 34 0 SHEET 2 D 7 THR B 369 VAL B 376 -1 O MET B 373 N PHE B 34 SHEET 3 D 7 PHE B 358 HIS B 364 -1 N HIS B 364 O THR B 369 SHEET 4 D 7 LEU B 233 PRO B 240 -1 N ALA B 238 O LEU B 359 SHEET 5 D 7 TYR B 220 PRO B 227 -1 N LEU B 226 O MET B 235 SHEET 6 D 7 THR B 196 THR B 214 -1 N ASN B 209 O GLU B 225 SHEET 7 D 7 HIS B 185 HIS B 190 -1 N HIS B 185 O MET B 201 SHEET 1 E 8 VAL B 32 PHE B 34 0 SHEET 2 E 8 THR B 369 VAL B 376 -1 O MET B 373 N PHE B 34 SHEET 3 E 8 PHE B 358 HIS B 364 -1 N HIS B 364 O THR B 369 SHEET 4 E 8 LEU B 233 PRO B 240 -1 N ALA B 238 O LEU B 359 SHEET 5 E 8 TYR B 220 PRO B 227 -1 N LEU B 226 O MET B 235 SHEET 6 E 8 THR B 196 THR B 214 -1 N ASN B 209 O GLU B 225 SHEET 7 E 8 THR B 267 PRO B 276 -1 O LEU B 273 N GLN B 204 SHEET 8 E 8 GLU B 350 ILE B 353 1 O GLU B 350 N LEU B 272 SHEET 1 F 5 LYS B 122 VAL B 124 0 SHEET 2 F 5 ILE B 91 GLN B 100 1 N ILE B 97 O LYS B 122 SHEET 3 F 5 LEU B 163 PHE B 171 -1 O VAL B 166 N ALA B 96 SHEET 4 F 5 GLN B 319 VAL B 328 1 O GLN B 319 N LEU B 165 SHEET 5 F 5 PHE B 278 ASP B 285 -1 N VAL B 284 O GLN B 322 LINK OE2 GLU A 212 ZN ZN B 381 1555 1555 2.56 LINK OE1 GLU A 212 ZN ZN B 381 1555 1555 2.61 LINK O HOH A 438 ZN ZN B 380 1555 1555 3.08 LINK N VAL B 1 ZN ZN B 381 1555 1555 2.24 LINK N HIS B 2 ZN ZN B 381 1555 1555 2.18 LINK NE2 HIS B 229 ZN ZN B 380 1555 1555 2.35 LINK ZN ZN B 380 O HOH B 418 1555 1555 2.91 CISPEP 1 GLY B 84 PRO B 85 0 -2.04 CISPEP 2 ASP B 89 GLU B 90 0 -1.96 CISPEP 3 GLY B 153 LYS B 154 0 0.14 SITE 1 AC1 4 SER A 192 PRO A 246 LEU A 247 ARG A 356 SITE 1 AC2 4 HIS A 261 HOH A 438 HIS B 229 HOH B 418 SITE 1 AC3 4 GLU A 212 VAL B 1 HIS B 2 HIS B 3 SITE 1 AC4 3 LEU B 247 ARG B 356 PRO B 357 SITE 1 AC5 8 ASN A 265 GLU B 81 LEU B 82 GLY B 84 SITE 2 AC5 8 ASP B 89 THR B 232 HIS B 364 HOH B 436 CRYST1 77.438 67.172 90.357 90.00 98.50 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012914 0.000000 0.001930 0.00000 SCALE2 0.000000 0.014887 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011190 0.00000