PDB Short entry for 3QTC HEADER LIGASE 22-FEB-11 3QTC TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMOMERS, AN O-METHYL TITLE 2 TYROSYL-TRNA SYNTHETASE EVOLVED FROM METHANOSARCINA MAZEI PYLRS, TITLE 3 COMPLEXED WITH O-METHYL TYROSINE AND AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRROLYSYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN OF PYLRS, UNP RESIDUES 185-454; COMPND 5 SYNONYM: PYRROLYSINE-TRNA LIGASE, PYLRS; COMPND 6 EC: 6.1.1.26; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; SOURCE 3 ORGANISM_COMMON: METHANOSARCINA FRISIA; SOURCE 4 ORGANISM_TAXID: 2209; SOURCE 5 GENE: MM_1445, PYLS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PYRROLYSYL-TRNA SYNTHETASE, AMINOACYL-TRNA SYNTHETASE, ATP BINDING, KEYWDS 2 O-METHYL TYROSINE BINDING, MAGNESIUM BINDING, AMINOACYLATION, KEYWDS 3 ESTERIFICATION, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR N.DELLAS,J.K.TAKIMOTO,J.P.NOEL,L.WANG REVDAT 4 06-DEC-23 3QTC 1 REMARK REVDAT 3 13-SEP-23 3QTC 1 REMARK SEQADV LINK REVDAT 2 10-AUG-11 3QTC 1 JRNL VERSN REVDAT 1 25-MAY-11 3QTC 0 JRNL AUTH J.K.TAKIMOTO,N.DELLAS,J.P.NOEL,L.WANG JRNL TITL STEREOCHEMICAL BASIS FOR ENGINEERED PYRROLYSYL-TRNA JRNL TITL 2 SYNTHETASE AND THE EFFICIENT IN VIVO INCORPORATION OF JRNL TITL 3 STRUCTURALLY DIVERGENT NON-NATIVE AMINO ACIDS. JRNL REF ACS CHEM.BIOL. V. 6 733 2011 JRNL REFN ISSN 1554-8929 JRNL PMID 21545173 JRNL DOI 10.1021/CB200057A REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2268 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3100 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2102 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 235 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.091 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.741 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2271 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3065 ; 1.305 ; 2.016 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 272 ; 5.793 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;32.947 ;23.636 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;14.381 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;17.189 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1713 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1324 ; 0.774 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2150 ; 1.488 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 947 ; 2.083 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 911 ; 3.583 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3QTC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000064077. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44965 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 35.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.38200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2ZCE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% PEG MME 2000, 100MM TRIS-HCL REMARK 280 PH7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.89133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.78267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.89133 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.78267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -52.40450 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -90.76726 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 165 REMARK 465 LYS A 166 REMARK 465 HIS A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 HIS A 174 REMARK 465 GLY A 175 REMARK 465 GLY A 176 REMARK 465 LEU A 177 REMARK 465 VAL A 178 REMARK 465 PRO A 179 REMARK 465 ARG A 180 REMARK 465 GLY A 181 REMARK 465 SER A 182 REMARK 465 HIS A 183 REMARK 465 GLY A 184 REMARK 465 ALA A 185 REMARK 465 SER A 186 REMARK 465 ALA A 187 REMARK 465 ILE A 208 REMARK 465 SER A 209 REMARK 465 LEU A 210 REMARK 465 ASN A 211 REMARK 465 ASP A 379 REMARK 465 SER A 380 REMARK 465 CYS A 381 REMARK 465 MET A 382 REMARK 465 VAL A 383 REMARK 465 PHE A 384 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 237 -99.37 -107.91 REMARK 500 ASP A 292 -151.42 54.15 REMARK 500 ASP A 414 40.47 -140.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 396 OE2 REMARK 620 2 SER A 399 OG 89.3 REMARK 620 3 HOH A 498 O 124.6 130.6 REMARK 620 4 HOH A 521 O 86.2 98.4 55.7 REMARK 620 5 ANP A 810 O1B 96.2 169.7 51.9 90.6 REMARK 620 6 ANP A 810 O2A 95.1 88.3 118.7 173.2 82.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 800 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 487 O REMARK 620 2 HOH A 490 O 90.6 REMARK 620 3 HOH A 492 O 89.5 86.5 REMARK 620 4 HOH A 494 O 87.4 83.9 169.9 REMARK 620 5 ANP A 810 O1G 171.0 95.7 97.2 87.0 REMARK 620 6 ANP A 810 O2B 85.6 176.2 93.6 95.7 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0A1 A 811 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 812 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 813 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 814 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 815 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 817 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 810 DBREF 3QTC A 185 454 UNP Q8PWY1 PYLS_METMA 185 454 SEQADV 3QTC MET A 165 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC LYS A 166 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 167 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 168 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 169 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 170 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 171 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 172 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 173 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 174 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC GLY A 175 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC GLY A 176 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC LEU A 177 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC VAL A 178 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC PRO A 179 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC ARG A 180 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC GLY A 181 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC SER A 182 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC HIS A 183 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC GLY A 184 UNP Q8PWY1 EXPRESSION TAG SEQADV 3QTC THR A 302 UNP Q8PWY1 ALA 302 ENGINEERED MUTATION SEQADV 3QTC VAL A 346 UNP Q8PWY1 ASN 346 ENGINEERED MUTATION SEQADV 3QTC TRP A 348 UNP Q8PWY1 CYS 348 ENGINEERED MUTATION SEQADV 3QTC PHE A 384 UNP Q8PWY1 TYR 384 ENGINEERED MUTATION SEQADV 3QTC LEU A 401 UNP Q8PWY1 VAL 401 ENGINEERED MUTATION SEQRES 1 A 290 MET LYS HIS HIS HIS HIS HIS HIS HIS HIS GLY GLY LEU SEQRES 2 A 290 VAL PRO ARG GLY SER HIS GLY ALA SER ALA PRO ALA LEU SEQRES 3 A 290 THR LYS SER GLN THR ASP ARG LEU GLU VAL LEU LEU ASN SEQRES 4 A 290 PRO LYS ASP GLU ILE SER LEU ASN SER GLY LYS PRO PHE SEQRES 5 A 290 ARG GLU LEU GLU SER GLU LEU LEU SER ARG ARG LYS LYS SEQRES 6 A 290 ASP LEU GLN GLN ILE TYR ALA GLU GLU ARG GLU ASN TYR SEQRES 7 A 290 LEU GLY LYS LEU GLU ARG GLU ILE THR ARG PHE PHE VAL SEQRES 8 A 290 ASP ARG GLY PHE LEU GLU ILE LYS SER PRO ILE LEU ILE SEQRES 9 A 290 PRO LEU GLU TYR ILE GLU ARG MET GLY ILE ASP ASN ASP SEQRES 10 A 290 THR GLU LEU SER LYS GLN ILE PHE ARG VAL ASP LYS ASN SEQRES 11 A 290 PHE CYS LEU ARG PRO MET LEU THR PRO ASN LEU TYR ASN SEQRES 12 A 290 TYR LEU ARG LYS LEU ASP ARG ALA LEU PRO ASP PRO ILE SEQRES 13 A 290 LYS ILE PHE GLU ILE GLY PRO CYS TYR ARG LYS GLU SER SEQRES 14 A 290 ASP GLY LYS GLU HIS LEU GLU GLU PHE THR MET LEU VAL SEQRES 15 A 290 PHE TRP GLN MET GLY SER GLY CYS THR ARG GLU ASN LEU SEQRES 16 A 290 GLU SER ILE ILE THR ASP PHE LEU ASN HIS LEU GLY ILE SEQRES 17 A 290 ASP PHE LYS ILE VAL GLY ASP SER CYS MET VAL PHE GLY SEQRES 18 A 290 ASP THR LEU ASP VAL MET HIS GLY ASP LEU GLU LEU SER SEQRES 19 A 290 SER ALA LEU VAL GLY PRO ILE PRO LEU ASP ARG GLU TRP SEQRES 20 A 290 GLY ILE ASP LYS PRO TRP ILE GLY ALA GLY PHE GLY LEU SEQRES 21 A 290 GLU ARG LEU LEU LYS VAL LYS HIS ASP PHE LYS ASN ILE SEQRES 22 A 290 LYS ARG ALA ALA ARG SER GLU SER TYR TYR ASN GLY ILE SEQRES 23 A 290 SER THR ASN LEU HET MG A 800 1 HET MG A 801 1 HET 0A1 A 811 14 HET EDO A 812 4 HET EDO A 813 4 HET EDO A 814 4 HET EDO A 815 4 HET EDO A 817 4 HET ANP A 810 31 HETNAM MG MAGNESIUM ION HETNAM 0A1 O-METHYL-L-TYROSINE HETNAM EDO 1,2-ETHANEDIOL HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG 2(MG 2+) FORMUL 4 0A1 C10 H13 N O3 FORMUL 5 EDO 5(C2 H6 O2) FORMUL 10 ANP C10 H17 N6 O12 P3 FORMUL 11 HOH *235(H2 O) HELIX 1 1 THR A 191 LEU A 202 1 12 HELIX 2 2 PRO A 215 GLU A 237 1 23 HELIX 3 3 ASN A 241 ARG A 257 1 17 HELIX 4 4 LEU A 270 MET A 276 1 7 HELIX 5 5 GLU A 283 ILE A 288 5 6 HELIX 6 6 LEU A 301 ASP A 313 1 13 HELIX 7 7 THR A 355 GLY A 371 1 17 HELIX 8 8 ILE A 405 GLY A 412 5 8 HELIX 9 9 LEU A 424 ASP A 433 1 10 HELIX 10 10 ASN A 436 ALA A 441 5 6 SHEET 1 A 7 LEU A 260 ILE A 262 0 SHEET 2 A 7 ILE A 320 TYR A 329 1 O LYS A 321 N LEU A 260 SHEET 3 A 7 GLU A 341 MET A 350 -1 O TRP A 348 N ILE A 322 SHEET 4 A 7 TRP A 417 GLY A 423 -1 O ILE A 418 N GLN A 349 SHEET 5 A 7 LEU A 395 VAL A 402 -1 N SER A 399 O GLY A 421 SHEET 6 A 7 ASP A 386 HIS A 392 -1 N LEU A 388 O ALA A 400 SHEET 7 A 7 LYS A 375 VAL A 377 -1 N VAL A 377 O ASP A 389 SHEET 1 B 3 LEU A 267 PRO A 269 0 SHEET 2 B 3 PHE A 295 LEU A 297 -1 O CYS A 296 N ILE A 268 SHEET 3 B 3 ARG A 290 VAL A 291 -1 N VAL A 291 O PHE A 295 SHEET 1 C 2 TYR A 446 TYR A 447 0 SHEET 2 C 2 ILE A 450 SER A 451 -1 O ILE A 450 N TYR A 447 LINK OE2 GLU A 396 MG MG A 801 1555 1555 2.60 LINK OG BSER A 399 MG MG A 801 1555 1555 2.17 LINK O HOH A 487 MG MG A 800 1555 1555 2.08 LINK O HOH A 490 MG MG A 800 1555 1555 2.11 LINK O HOH A 492 MG MG A 800 1555 1555 2.09 LINK O HOH A 494 MG MG A 800 1555 1555 2.17 LINK O HOH A 498 MG MG A 801 1555 1555 2.88 LINK O HOH A 521 MG MG A 801 1555 1555 2.00 LINK MG MG A 800 O1G ANP A 810 1555 1555 2.00 LINK MG MG A 800 O2B ANP A 810 1555 1555 2.01 LINK MG MG A 801 O1B ANP A 810 1555 1555 2.39 LINK MG MG A 801 O2A ANP A 810 1555 1555 2.46 CISPEP 1 ASP A 318 PRO A 319 0 1.40 CISPEP 2 GLY A 403 PRO A 404 0 2.94 SITE 1 AC1 5 HOH A 487 HOH A 490 HOH A 492 HOH A 494 SITE 2 AC1 5 ANP A 810 SITE 1 AC2 5 GLU A 396 SER A 399 HOH A 498 HOH A 521 SITE 2 AC2 5 ANP A 810 SITE 1 AC3 10 HOH A 70 MET A 300 THR A 302 TRP A 348 SITE 2 AC3 10 SER A 399 LEU A 401 GLY A 419 ALA A 420 SITE 3 AC3 10 HOH A 545 EDO A 812 SITE 1 AC4 6 THR A 302 TYR A 306 LEU A 401 TRP A 417 SITE 2 AC4 6 HOH A 512 0A1 A 811 SITE 1 AC5 3 LYS A 429 ASP A 433 PHE A 434 SITE 1 AC6 5 TYR A 242 LEU A 246 GLU A 249 LYS A 431 SITE 2 AC6 5 HIS A 432 SITE 1 AC7 6 HOH A 23 ASN A 241 ARG A 439 ALA A 440 SITE 2 AC7 6 ASN A 448 GLY A 449 SITE 1 AC8 6 TYR A 272 ASN A 307 ARG A 310 LYS A 311 SITE 2 AC8 6 GLU A 357 GLU A 444 SITE 1 AC9 25 HOH A 1 HOH A 6 HOH A 79 HOH A 130 SITE 2 AC9 25 HOH A 138 ARG A 330 GLU A 332 HIS A 338 SITE 3 AC9 25 LEU A 339 PHE A 342 MET A 344 GLU A 396 SITE 4 AC9 25 LEU A 397 SER A 398 SER A 399 GLY A 421 SITE 5 AC9 25 GLY A 423 ARG A 426 HOH A 487 HOH A 490 SITE 6 AC9 25 HOH A 492 HOH A 494 HOH A 498 MG A 800 SITE 7 AC9 25 MG A 801 CRYST1 104.809 104.809 71.674 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009541 0.005509 0.000000 0.00000 SCALE2 0.000000 0.011017 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013952 0.00000