PDB Short entry for 3QY7 HEADER HYDROLASE 03-MAR-11 3QY7 TITLE CRYSTAL STRUCTURES OF YWQE FROM BACILLUS SUBTILIS AND CPSB FROM TITLE 2 STREPTOCOCCUS PNEUMONIAE, UNIQUE METAL-DEPENDENT TYROSINE TITLE 3 PHOSPHATASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE YWQE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.3.48; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: BSU36240, YWQE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A(+) KEYWDS TIM BARREL, POLYMERASE AND HISTINDINOL PHOSPHATASE(PHP)-LIKE KEYWDS 2 PHOSPHATASE, PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.S.KIM,S.J.LEE,H.J.YOON,D.R.AN,D.J.KIM,S.-J.KIM,S.W.SUH REVDAT 2 17-AUG-11 3QY7 1 JRNL VERSN REVDAT 1 08-JUN-11 3QY7 0 JRNL AUTH H.S.KIM,S.J.LEE,H.J.YOON,D.R.AN,D.J.KIM,S.J.KIM,S.W.SUH JRNL TITL CRYSTAL STRUCTURES OF YWQE FROM BACILLUS SUBTILIS AND CPSB JRNL TITL 2 FROM STREPTOCOCCUS PNEUMONIAE, UNIQUE METAL-DEPENDENT JRNL TITL 3 TYROSINE PHOSPHATASES. JRNL REF J.STRUCT.BIOL. V. 175 442 2011 JRNL REFN ISSN 1047-8477 JRNL PMID 21605684 JRNL DOI 10.1016/J.JSB.2011.05.007 REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 28284 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1511 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2061 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1980 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.52000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.102 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2036 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2760 ; 1.269 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 248 ; 5.260 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;35.664 ;24.078 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 357 ;15.173 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.658 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1561 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1242 ; 0.680 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2008 ; 1.300 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 794 ; 2.197 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 752 ; 3.718 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-11. REMARK 100 THE RCSB ID CODE IS RCSB064252. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29883 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 64.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 11.50 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE, 25% (W/V) PEG REMARK 280 3350, PH 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.22450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.00650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.65550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.00650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.22450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.65550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 248 REMARK 465 LYS A 249 REMARK 465 LEU A 250 REMARK 465 PHE A 251 REMARK 465 GLY A 252 REMARK 465 PHE A 253 REMARK 465 PHE A 254 REMARK 465 LEU A 255 REMARK 465 GLU A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG A 265 O3 PO4 A 266 1.33 REMARK 500 ND1 HIS A 42 O HOH A 368 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 7 58.69 -107.01 REMARK 500 ASP A 13 -157.38 -158.27 REMARK 500 HIS A 136 63.48 34.30 REMARK 500 ARG A 201 69.51 -102.60 REMARK 500 ASN A 202 -158.85 -107.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASP A 13 24.2 L L OUTSIDE RANGE REMARK 500 LYS A 199 25.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 264 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 548 O REMARK 620 2 PO4 A 266 O1 84.9 REMARK 620 3 HIS A 5 NE2 95.8 174.1 REMARK 620 4 HIS A 7 NE2 168.3 83.5 95.7 REMARK 620 5 GLU A 80 OE1 93.4 96.0 89.8 88.6 REMARK 620 6 ASP A 194 OD1 91.6 92.9 81.3 88.2 170.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 263 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 548 O REMARK 620 2 PO4 A 266 O4 90.3 REMARK 620 3 GLU A 80 OE2 86.4 102.6 REMARK 620 4 GLU A 108 OE1 171.3 84.0 88.5 REMARK 620 5 HIS A 136 NE2 89.7 154.3 103.0 98.4 REMARK 620 6 HOH A 549 O 95.1 70.0 172.4 89.1 84.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 265 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 266 O1 REMARK 620 2 ASP A 14 OD1 161.2 REMARK 620 3 ASP A 14 OD2 145.6 53.0 REMARK 620 4 PO4 A 266 O2 55.4 106.0 159.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 265 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 266 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QY6 RELATED DB: PDB REMARK 900 YWQE-APO REMARK 900 RELATED ID: 3QY8 RELATED DB: PDB DBREF 3QY7 A 1 254 UNP P96717 YWQE_BACSU 1 254 SEQADV 3QY7 LEU A 255 UNP P96717 EXPRESSION TAG SEQADV 3QY7 GLU A 256 UNP P96717 EXPRESSION TAG SEQADV 3QY7 HIS A 257 UNP P96717 EXPRESSION TAG SEQADV 3QY7 HIS A 258 UNP P96717 EXPRESSION TAG SEQADV 3QY7 HIS A 259 UNP P96717 EXPRESSION TAG SEQADV 3QY7 HIS A 260 UNP P96717 EXPRESSION TAG SEQADV 3QY7 HIS A 261 UNP P96717 EXPRESSION TAG SEQADV 3QY7 HIS A 262 UNP P96717 EXPRESSION TAG SEQRES 1 A 262 MET ILE ASP ILE HIS CYS HIS ILE LEU PRO ALA MET ASP SEQRES 2 A 262 ASP GLY ALA GLY ASP SER ALA ASP SER ILE GLU MET ALA SEQRES 3 A 262 ARG ALA ALA VAL ARG GLN GLY ILE ARG THR ILE ILE ALA SEQRES 4 A 262 THR PRO HIS HIS ASN ASN GLY VAL TYR LYS ASN GLU PRO SEQRES 5 A 262 ALA ALA VAL ARG GLU ALA ALA ASP GLN LEU ASN LYS ARG SEQRES 6 A 262 LEU ILE LYS GLU ASP ILE PRO LEU HIS VAL LEU PRO GLY SEQRES 7 A 262 GLN GLU ILE ARG ILE TYR GLY GLU VAL GLU GLN ASP LEU SEQRES 8 A 262 ALA LYS ARG GLN LEU LEU SER LEU ASN ASP THR LYS TYR SEQRES 9 A 262 ILE LEU ILE GLU PHE PRO PHE ASP HIS VAL PRO ARG TYR SEQRES 10 A 262 ALA GLU GLN LEU PHE TYR ASP LEU GLN LEU LYS GLY TYR SEQRES 11 A 262 ILE PRO VAL ILE ALA HIS PRO GLU ARG ASN ARG GLU ILE SEQRES 12 A 262 ARG GLU ASN PRO SER LEU LEU TYR HIS LEU VAL GLU LYS SEQRES 13 A 262 GLY ALA ALA SER GLN ILE THR SER GLY SER LEU ALA GLY SEQRES 14 A 262 ILE PHE GLY LYS GLN LEU LYS ALA PHE SER LEU ARG LEU SEQRES 15 A 262 VAL GLU ALA ASN LEU ILE HIS PHE VAL ALA SER ASP ALA SEQRES 16 A 262 HIS ASN VAL LYS THR ARG ASN PHE HIS THR GLN GLU ALA SEQRES 17 A 262 LEU TYR VAL LEU GLU LYS GLU PHE GLY SER GLU LEU PRO SEQRES 18 A 262 TYR MET LEU THR GLU ASN ALA GLU LEU LEU LEU ARG ASN SEQRES 19 A 262 GLN THR ILE PHE ARG GLN PRO PRO GLN PRO VAL LYS ARG SEQRES 20 A 262 ARG LYS LEU PHE GLY PHE PHE LEU GLU HIS HIS HIS HIS SEQRES 21 A 262 HIS HIS HET FE A 263 1 HET FE A 264 1 HET MG A 265 1 HET PO4 A 266 5 HETNAM FE FE (III) ION HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 2 FE 2(FE 3+) FORMUL 4 MG MG 2+ FORMUL 5 PO4 O4 P 3- FORMUL 6 HOH *300(H2 O) HELIX 1 1 ASP A 18 GLN A 32 1 15 HELIX 2 2 GLU A 51 GLU A 69 1 19 HELIX 3 3 GLU A 86 LYS A 93 1 8 HELIX 4 4 SER A 98 THR A 102 5 5 HELIX 5 5 TYR A 117 LYS A 128 1 12 HELIX 6 6 PRO A 137 ARG A 139 5 3 HELIX 7 7 ASN A 140 ASN A 146 1 7 HELIX 8 8 PRO A 147 LYS A 156 1 10 HELIX 9 9 SER A 164 GLY A 169 1 6 HELIX 10 10 GLY A 172 ALA A 185 1 14 HELIX 11 11 HIS A 204 GLY A 217 1 14 HELIX 12 12 SER A 218 ARG A 233 1 16 SHEET 1 A 3 ILE A 2 ASP A 3 0 SHEET 2 A 3 THR A 36 ILE A 38 1 O ILE A 38 N ASP A 3 SHEET 3 A 3 HIS A 74 LEU A 76 1 O LEU A 76 N ILE A 37 SHEET 1 B 2 ASN A 44 ASN A 45 0 SHEET 2 B 2 TYR A 48 LYS A 49 -1 O TYR A 48 N ASN A 45 SHEET 1 C 5 GLU A 80 ARG A 82 0 SHEET 2 C 5 TYR A 104 GLU A 108 1 O LEU A 106 N ILE A 81 SHEET 3 C 5 ILE A 131 ALA A 135 1 O VAL A 133 N ILE A 105 SHEET 4 C 5 ALA A 159 THR A 163 1 O ALA A 159 N ILE A 134 SHEET 5 C 5 PHE A 190 ALA A 192 1 O PHE A 190 N ILE A 162 LINK FE FE A 264 O HOH A 548 1555 1555 1.88 LINK FE FE A 263 O HOH A 548 1555 1555 2.06 LINK FE FE A 263 O4 PO4 A 266 1555 1555 2.08 LINK FE FE A 264 O1 PO4 A 266 1555 1555 2.09 LINK OE2 GLU A 80 FE FE A 263 1555 1555 2.10 LINK OE1 GLU A 108 FE FE A 263 1555 1555 2.11 LINK NE2 HIS A 5 FE FE A 264 1555 1555 2.13 LINK NE2 HIS A 7 FE FE A 264 1555 1555 2.13 LINK OE1 GLU A 80 FE FE A 264 1555 1555 2.16 LINK NE2 HIS A 136 FE FE A 263 1555 1555 2.21 LINK OD1 ASP A 194 FE FE A 264 1555 1555 2.23 LINK FE FE A 263 O HOH A 549 1555 1555 2.23 LINK MG MG A 265 O1 PO4 A 266 1555 1555 2.32 LINK OD1AASP A 14 MG MG A 265 1555 1555 2.34 LINK OD2AASP A 14 MG MG A 265 1555 1555 2.50 LINK MG MG A 265 O2 PO4 A 266 1555 1555 2.88 SITE 1 AC1 7 GLU A 80 GLU A 108 HIS A 136 FE A 264 SITE 2 AC1 7 PO4 A 266 HOH A 548 HOH A 549 SITE 1 AC2 7 HIS A 5 HIS A 7 GLU A 80 ASP A 194 SITE 2 AC2 7 FE A 263 PO4 A 266 HOH A 548 SITE 1 AC3 4 ASP A 14 HIS A 42 HIS A 196 PO4 A 266 SITE 1 AC4 15 HIS A 7 ASP A 14 HIS A 42 GLU A 80 SITE 2 AC4 15 GLU A 108 ASP A 194 HIS A 196 ARG A 201 SITE 3 AC4 15 FE A 263 FE A 264 MG A 265 HOH A 288 SITE 4 AC4 15 HOH A 541 HOH A 548 HOH A 549 CRYST1 36.449 47.311 132.013 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027436 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007575 0.00000