PDB Short entry for 3R3M HEADER APOPTOSIS 16-MAR-11 3R3M TITLE CRYSTAL STRUCTURE OF THE FAF1 UBX DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAS-ASSOCIATED FACTOR 1; COMPND 3 CHAIN: B, A, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 568-650; COMPND 5 SYNONYM: HFAF1, UBX DOMAIN-CONTAINING PROTEIN 12, UBX DOMAIN- COMPND 6 CONTAINING PROTEIN 3A; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FAF1, UBXD12, UBXN3A, CGI-03; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS BETA GRASP FOLD, APOPTOSIS, P97, PHOSPHORYLATION EXPDTA X-RAY DIFFRACTION AUTHOR P.HAENZELMANN,H.SCHINDELIN REVDAT 3 13-SEP-23 3R3M 1 REMARK SEQADV REVDAT 2 17-JUL-19 3R3M 1 REMARK REVDAT 1 22-JUN-11 3R3M 0 JRNL AUTH P.HANZELMANN,A.BUCHBERGER,H.SCHINDELIN JRNL TITL HIERARCHICAL BINDING OF COFACTORS TO THE AAA ATPASE P97. JRNL REF STRUCTURE V. 19 833 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 21645854 JRNL DOI 10.1016/J.STR.2011.03.018 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 10402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 498 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 51.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.67340 REMARK 3 B22 (A**2) : 0.67340 REMARK 3 B33 (A**2) : -1.34670 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 566:649) REMARK 3 ORIGIN FOR THE GROUP (A): -36.4034 13.5403 2.8180 REMARK 3 T TENSOR REMARK 3 T11: 0.1795 T22: 0.1767 REMARK 3 T33: 0.0867 T12: 0.0278 REMARK 3 T13: 0.0058 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 2.2694 L22: 5.2613 REMARK 3 L33: 0.9388 L12: 1.2612 REMARK 3 L13: -0.9924 L23: -1.9684 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: -0.0215 S13: 0.3405 REMARK 3 S21: 0.8369 S22: 0.3625 S23: 0.1332 REMARK 3 S31: -0.3373 S32: -0.2041 S33: -0.2154 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 568:649) REMARK 3 ORIGIN FOR THE GROUP (A): -38.3874 16.8059 -23.9131 REMARK 3 T TENSOR REMARK 3 T11: 0.1080 T22: 0.2372 REMARK 3 T33: 0.1167 T12: -0.0375 REMARK 3 T13: -0.0054 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.8295 L22: 1.6348 REMARK 3 L33: 0.3720 L12: 0.1188 REMARK 3 L13: -0.4384 L23: 0.3363 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: 0.3357 S13: -0.1547 REMARK 3 S21: -0.3959 S22: 0.1079 S23: 0.0140 REMARK 3 S31: -0.0502 S32: -0.2009 S33: -0.0801 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESID 569:649) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2173 12.7684 -8.4262 REMARK 3 T TENSOR REMARK 3 T11: 0.0748 T22: 0.2199 REMARK 3 T33: 0.3474 T12: -0.0072 REMARK 3 T13: 0.0387 T23: 0.1888 REMARK 3 L TENSOR REMARK 3 L11: 2.0556 L22: 1.2603 REMARK 3 L33: 1.6238 L12: 1.1834 REMARK 3 L13: -1.0924 L23: -1.0087 REMARK 3 S TENSOR REMARK 3 S11: -0.3172 S12: -0.2084 S13: -0.7027 REMARK 3 S21: 0.0320 S22: -0.2505 S23: -0.4961 REMARK 3 S31: 0.0169 S32: 0.5895 S33: 0.5452 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN D AND RESID 567:649) REMARK 3 ORIGIN FOR THE GROUP (A): -42.2290 38.3038 -11.1458 REMARK 3 T TENSOR REMARK 3 T11: 0.4627 T22: 0.2720 REMARK 3 T33: 0.0636 T12: 0.1793 REMARK 3 T13: -0.0646 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.4874 L22: 1.9960 REMARK 3 L33: 4.7254 L12: 0.1948 REMARK 3 L13: -2.0030 L23: -0.6451 REMARK 3 S TENSOR REMARK 3 S11: 0.2351 S12: 0.3638 S13: 0.1435 REMARK 3 S21: 0.2864 S22: -0.1927 S23: -0.2119 REMARK 3 S31: -1.1429 S32: -0.9677 S33: -0.0109 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B AND (RESSEQ 571:618 OR RESSEQ REMARK 3 621:649 ) REMARK 3 SELECTION : CHAIN A AND (RESSEQ 571:618 OR RESSEQ REMARK 3 621:649 ) REMARK 3 ATOM PAIRS NUMBER : 640 REMARK 3 RMSD : 1.002 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN B AND (RESSEQ 571:618 OR RESSEQ REMARK 3 621:649 ) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 571:618 OR RESSEQ REMARK 3 621:649 ) REMARK 3 ATOM PAIRS NUMBER : 640 REMARK 3 RMSD : 1.128 REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN B AND (RESSEQ 571:618 OR RESSEQ REMARK 3 621:649 ) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 571:618 OR RESSEQ REMARK 3 621:649 ) REMARK 3 ATOM PAIRS NUMBER : 640 REMARK 3 RMSD : 0.919 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064446. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI(III) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10693 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 80.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.51800 REMARK 200 R SYM FOR SHELL (I) : 0.51800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3QQ8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M NAH2PO4/1.6 M K2HPO4, 0.1 M REMARK 280 IMIDAZOLE, 0.2 M NACL, PH 8, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.16667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.33333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.25000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 90.41667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.08333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 566 REMARK 465 SER B 567 REMARK 465 GLU B 650 REMARK 465 GLU A 650 REMARK 465 MET C 566 REMARK 465 SER C 567 REMARK 465 GLU C 568 REMARK 465 GLU C 650 REMARK 465 MET D 566 REMARK 465 GLU D 650 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 566 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 619 N - CA - C ANGL. DEV. = -16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 588 136.90 -172.41 REMARK 500 PHE B 619 103.23 175.58 REMARK 500 ARG B 622 164.31 174.46 REMARK 500 GLU A 568 -140.89 -149.83 REMARK 500 PHE A 608 63.09 -119.95 REMARK 500 PHE A 619 -124.07 105.82 REMARK 500 LYS A 637 47.19 70.74 REMARK 500 GLU A 647 113.79 -161.10 REMARK 500 PHE C 619 -37.67 163.78 REMARK 500 VAL C 624 -34.62 -32.63 REMARK 500 LEU C 638 74.35 -111.59 REMARK 500 PHE C 639 140.42 -172.35 REMARK 500 PHE D 619 94.77 36.87 REMARK 500 LEU D 638 72.88 -100.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 619 PRO A 620 149.17 REMARK 500 PHE C 619 PRO C 620 137.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 1 DBREF 3R3M B 568 650 UNP Q9UNN5 FAF1_HUMAN 568 650 DBREF 3R3M A 568 650 UNP Q9UNN5 FAF1_HUMAN 568 650 DBREF 3R3M C 568 650 UNP Q9UNN5 FAF1_HUMAN 568 650 DBREF 3R3M D 568 650 UNP Q9UNN5 FAF1_HUMAN 568 650 SEQADV 3R3M MET B 566 UNP Q9UNN5 INITIATING METHIONINE SEQADV 3R3M SER B 567 UNP Q9UNN5 EXPRESSION TAG SEQADV 3R3M MET A 566 UNP Q9UNN5 INITIATING METHIONINE SEQADV 3R3M SER A 567 UNP Q9UNN5 EXPRESSION TAG SEQADV 3R3M MET C 566 UNP Q9UNN5 INITIATING METHIONINE SEQADV 3R3M SER C 567 UNP Q9UNN5 EXPRESSION TAG SEQADV 3R3M MET D 566 UNP Q9UNN5 INITIATING METHIONINE SEQADV 3R3M SER D 567 UNP Q9UNN5 EXPRESSION TAG SEQRES 1 B 85 MET SER GLU ASN ALA GLU PRO VAL SER LYS LEU ARG ILE SEQRES 2 B 85 ARG THR PRO SER GLY GLU PHE LEU GLU ARG ARG PHE LEU SEQRES 3 B 85 ALA SER ASN LYS LEU GLN ILE VAL PHE ASP PHE VAL ALA SEQRES 4 B 85 SER LYS GLY PHE PRO TRP ASP GLU TYR LYS LEU LEU SER SEQRES 5 B 85 THR PHE PRO ARG ARG ASP VAL THR GLN LEU ASP PRO ASN SEQRES 6 B 85 LYS SER LEU LEU GLU VAL LYS LEU PHE PRO GLN GLU THR SEQRES 7 B 85 LEU PHE LEU GLU ALA LYS GLU SEQRES 1 A 85 MET SER GLU ASN ALA GLU PRO VAL SER LYS LEU ARG ILE SEQRES 2 A 85 ARG THR PRO SER GLY GLU PHE LEU GLU ARG ARG PHE LEU SEQRES 3 A 85 ALA SER ASN LYS LEU GLN ILE VAL PHE ASP PHE VAL ALA SEQRES 4 A 85 SER LYS GLY PHE PRO TRP ASP GLU TYR LYS LEU LEU SER SEQRES 5 A 85 THR PHE PRO ARG ARG ASP VAL THR GLN LEU ASP PRO ASN SEQRES 6 A 85 LYS SER LEU LEU GLU VAL LYS LEU PHE PRO GLN GLU THR SEQRES 7 A 85 LEU PHE LEU GLU ALA LYS GLU SEQRES 1 C 85 MET SER GLU ASN ALA GLU PRO VAL SER LYS LEU ARG ILE SEQRES 2 C 85 ARG THR PRO SER GLY GLU PHE LEU GLU ARG ARG PHE LEU SEQRES 3 C 85 ALA SER ASN LYS LEU GLN ILE VAL PHE ASP PHE VAL ALA SEQRES 4 C 85 SER LYS GLY PHE PRO TRP ASP GLU TYR LYS LEU LEU SER SEQRES 5 C 85 THR PHE PRO ARG ARG ASP VAL THR GLN LEU ASP PRO ASN SEQRES 6 C 85 LYS SER LEU LEU GLU VAL LYS LEU PHE PRO GLN GLU THR SEQRES 7 C 85 LEU PHE LEU GLU ALA LYS GLU SEQRES 1 D 85 MET SER GLU ASN ALA GLU PRO VAL SER LYS LEU ARG ILE SEQRES 2 D 85 ARG THR PRO SER GLY GLU PHE LEU GLU ARG ARG PHE LEU SEQRES 3 D 85 ALA SER ASN LYS LEU GLN ILE VAL PHE ASP PHE VAL ALA SEQRES 4 D 85 SER LYS GLY PHE PRO TRP ASP GLU TYR LYS LEU LEU SER SEQRES 5 D 85 THR PHE PRO ARG ARG ASP VAL THR GLN LEU ASP PRO ASN SEQRES 6 D 85 LYS SER LEU LEU GLU VAL LYS LEU PHE PRO GLN GLU THR SEQRES 7 D 85 LEU PHE LEU GLU ALA LYS GLU HET PO4 B 2 5 HET PO4 B 3 5 HET PO4 D 1 5 HETNAM PO4 PHOSPHATE ION FORMUL 5 PO4 3(O4 P 3-) FORMUL 8 HOH *24(H2 O) HELIX 1 1 LYS B 595 SER B 605 1 11 HELIX 2 2 THR B 625 LEU B 627 5 3 HELIX 3 3 LEU A 596 LYS A 606 1 11 HELIX 4 4 THR A 625 LEU A 627 5 3 HELIX 5 5 LEU C 596 LYS C 606 1 11 HELIX 6 6 THR C 625 LEU C 627 5 3 HELIX 7 7 LEU D 596 LYS D 606 1 11 HELIX 8 8 THR D 625 LEU D 627 5 3 SHEET 1 A 5 PHE B 585 LEU B 591 0 SHEET 2 A 5 VAL B 573 ARG B 579 -1 N ILE B 578 O LEU B 586 SHEET 3 A 5 GLN B 641 ALA B 648 1 O LEU B 644 N ARG B 577 SHEET 4 A 5 TYR B 613 SER B 617 -1 N LYS B 614 O GLU B 647 SHEET 5 A 5 ARG B 622 ASP B 623 -1 O ARG B 622 N SER B 617 SHEET 1 B 5 PHE A 585 LEU A 591 0 SHEET 2 B 5 VAL A 573 ARG A 579 -1 N ILE A 578 O LEU A 586 SHEET 3 B 5 GLN A 641 ALA A 648 1 O LEU A 644 N ARG A 577 SHEET 4 B 5 TYR A 613 SER A 617 -1 N LEU A 616 O PHE A 645 SHEET 5 B 5 ARG A 622 ASP A 623 -1 O ARG A 622 N SER A 617 SHEET 1 C 5 PHE C 585 LEU C 591 0 SHEET 2 C 5 VAL C 573 ARG C 579 -1 N SER C 574 O PHE C 590 SHEET 3 C 5 GLN C 641 ALA C 648 1 O LEU C 644 N ARG C 577 SHEET 4 C 5 TYR C 613 SER C 617 -1 N LYS C 614 O GLU C 647 SHEET 5 C 5 ARG C 622 ASP C 623 -1 O ARG C 622 N SER C 617 SHEET 1 D 5 PHE D 585 LEU D 591 0 SHEET 2 D 5 VAL D 573 ARG D 579 -1 N ILE D 578 O LEU D 586 SHEET 3 D 5 GLN D 641 ALA D 648 1 O LEU D 646 N ARG D 579 SHEET 4 D 5 TYR D 613 SER D 617 -1 N LEU D 616 O PHE D 645 SHEET 5 D 5 ARG D 622 ASP D 623 -1 O ARG D 622 N SER D 617 CISPEP 1 PHE B 619 PRO B 620 0 -6.40 CISPEP 2 PHE B 639 PRO B 640 0 2.54 CISPEP 3 PHE A 639 PRO A 640 0 5.62 CISPEP 4 PHE C 639 PRO C 640 0 6.48 CISPEP 5 PHE D 619 PRO D 620 0 -6.53 CISPEP 6 PHE D 639 PRO D 640 0 1.30 SITE 1 AC1 5 HOH B 18 GLU B 587 ARG B 588 PHE B 602 SITE 2 AC1 5 LYS B 606 SITE 1 AC2 5 LYS B 637 PHE B 639 THR D 618 GLU D 642 SITE 2 AC2 5 THR D 643 SITE 1 AC3 5 LYS A 637 PRO B 620 ARG B 621 LYS D 575 SITE 2 AC3 5 GLN D 641 CRYST1 92.755 92.755 108.500 90.00 90.00 120.00 P 61 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010781 0.006224 0.000000 0.00000 SCALE2 0.000000 0.012449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009217 0.00000