PDB Short entry for 3RDA HEADER ISOMERASE/ISOMERASE INHIBITOR 01-APR-11 3RDA TITLE HUMAN CYCLOPHILIN D COMPLEXED WITH A FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE F, MITOCHONDRIAL; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: UNP RESIDUES 43-207; COMPND 5 SYNONYM: PPIASE F, CYCLOPHILIN F, ROTAMASE F; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPIF, CYP3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA BARREL, PROLYL CIS/TRANS ISOMERASE, MITOCHONDRIA, INHIBITOR, KEYWDS 2 ISOMERASE-ISOMERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.COLLIANDRE,H.AHMED-BELKACEM,Y.BESSIN,J.M.PAWLOTSKY,J.F.GUICHOU REVDAT 3 13-SEP-23 3RDA 1 REMARK SEQADV REVDAT 2 19-OCT-16 3RDA 1 JRNL REVDAT 1 21-MAR-12 3RDA 0 JRNL AUTH A.AHMED-BELKACEM,L.COLLIANDRE,N.AHNOU,Q.NEVERS,M.GELIN, JRNL AUTH 2 Y.BESSIN,R.BRILLET,O.CALA,D.DOUGUET,W.BOURGUET,I.KRIMM, JRNL AUTH 3 J.M.PAWLOTSKY,J.F.GUICHOU JRNL TITL FRAGMENT-BASED DISCOVERY OF A NEW FAMILY OF NON-PEPTIDIC JRNL TITL 2 SMALL-MOLECULE CYCLOPHILIN INHIBITORS WITH POTENT ANTIVIRAL JRNL TITL 3 ACTIVITIES. JRNL REF NAT COMMUN V. 7 12777 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 27652979 JRNL DOI 10.1038/NCOMMS12777 REMARK 2 REMARK 2 RESOLUTION. 1.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0062 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 58156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.116 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.138 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3075 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3149 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 163 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1235 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 351 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 4.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.026 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.027 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.015 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.673 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.009 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; 0.002 ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.551 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; 0.870 ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; 6.323 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ;34.294 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ;11.377 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ;11.248 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; 0.086 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; 0.006 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; 0.001 ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; 0.940 ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; 0.397 ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; 1.366 ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; 1.686 ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; 2.298 ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; 0.748 ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; 4.143 ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; 1.933 ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RDA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : YALE MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58156 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.070 REMARK 200 RESOLUTION RANGE LOW (A) : 29.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 12.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.15900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: PDB ENTRY 2BIT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG4000, PH 7.3, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.50450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.61100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.61100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.75225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.61100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.61100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.25675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.61100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.61100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.75225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.61100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.61100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.25675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 43.50450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH X 322 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 42 REMARK 465 SER X 43 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG X 193 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE X 102 -77.13 -140.94 REMARK 500 THR X 161 63.36 -104.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MIO X 213 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3R49 RELATED DB: PDB REMARK 900 RELATED ID: 3R4G RELATED DB: PDB REMARK 900 RELATED ID: 3R54 RELATED DB: PDB REMARK 900 RELATED ID: 3R56 RELATED DB: PDB REMARK 900 RELATED ID: 3R57 RELATED DB: PDB REMARK 900 RELATED ID: 3R59 RELATED DB: PDB REMARK 900 RELATED ID: 3RCF RELATED DB: PDB REMARK 900 RELATED ID: 3RCG RELATED DB: PDB REMARK 900 RELATED ID: 3RCI RELATED DB: PDB REMARK 900 RELATED ID: 3RCK RELATED DB: PDB REMARK 900 RELATED ID: 3RCL RELATED DB: PDB REMARK 900 RELATED ID: 3RD9 RELATED DB: PDB REMARK 900 RELATED ID: 3RDB RELATED DB: PDB REMARK 900 RELATED ID: 3RDC RELATED DB: PDB REMARK 900 RELATED ID: 3RDD RELATED DB: PDB DBREF 3RDA X 43 207 UNP P30405 PPIF_HUMAN 43 207 SEQADV 3RDA MET X 42 UNP P30405 INITIATING METHIONINE SEQADV 3RDA ILE X 175 UNP P30405 LYS 175 ENGINEERED MUTATION SEQRES 1 X 166 MET SER GLY ASN PRO LEU VAL TYR LEU ASP VAL ASP ALA SEQRES 2 X 166 ASN GLY LYS PRO LEU GLY ARG VAL VAL LEU GLU LEU LYS SEQRES 3 X 166 ALA ASP VAL VAL PRO LYS THR ALA GLU ASN PHE ARG ALA SEQRES 4 X 166 LEU CYS THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER SEQRES 5 X 166 THR PHE HIS ARG VAL ILE PRO SER PHE MET CYS GLN ALA SEQRES 6 X 166 GLY ASP PHE THR ASN HIS ASN GLY THR GLY GLY LYS SER SEQRES 7 X 166 ILE TYR GLY SER ARG PHE PRO ASP GLU ASN PHE THR LEU SEQRES 8 X 166 LYS HIS VAL GLY PRO GLY VAL LEU SER MET ALA ASN ALA SEQRES 9 X 166 GLY PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR SEQRES 10 X 166 ILE LYS THR ASP TRP LEU ASP GLY LYS HIS VAL VAL PHE SEQRES 11 X 166 GLY HIS VAL ILE GLU GLY MET ASP VAL VAL LYS LYS ILE SEQRES 12 X 166 GLU SER PHE GLY SER LYS SER GLY ARG THR SER LYS LYS SEQRES 13 X 166 ILE VAL ILE THR ASP CYS GLY GLN LEU SER HET MIO X 1 7 HET MIO X 208 7 HET MIO X 209 7 HET MIO X 210 7 HET MIO X 211 7 HET MIO X 212 14 HET MIO X 213 7 HETNAM MIO 3-METHYL-1,2-OXAZOL-5-AMINE FORMUL 2 MIO 7(C4 H6 N2 O) FORMUL 9 HOH *351(H2 O) HELIX 1 1 VAL X 71 GLY X 84 1 14 HELIX 2 2 THR X 161 ASP X 165 5 5 HELIX 3 3 GLY X 177 PHE X 187 1 11 SHEET 1 A 8 PHE X 95 ILE X 99 0 SHEET 2 A 8 MET X 103 ALA X 106 -1 O GLN X 105 N ARG X 97 SHEET 3 A 8 PHE X 154 CYS X 157 -1 O PHE X 154 N ALA X 106 SHEET 4 A 8 VAL X 139 MET X 142 -1 N VAL X 139 O CYS X 157 SHEET 5 A 8 VAL X 170 GLU X 176 -1 O PHE X 171 N LEU X 140 SHEET 6 A 8 LYS X 57 LEU X 66 -1 N VAL X 63 O ILE X 175 SHEET 7 A 8 LEU X 47 ALA X 54 -1 N VAL X 52 O LEU X 59 SHEET 8 A 8 ILE X 198 GLN X 205 -1 O ASP X 202 N ASP X 51 SITE 1 AC1 9 ARG X 97 PHE X 102 MET X 103 PHE X 155 SITE 2 AC1 9 MIO X 208 HOH X 311 HOH X 382 HOH X 454 SITE 3 AC1 9 HOH X 459 SITE 1 AC2 7 MIO X 1 ARG X 97 GLN X 105 ALA X 143 SITE 2 AC2 7 ASN X 144 HIS X 168 HOH X 383 SITE 1 AC3 6 GLY X 114 ARG X 124 ASN X 144 GLN X 153 SITE 2 AC3 6 HOH X 434 HOH X 508 SITE 1 AC4 6 ASN X 55 GLY X 56 PHE X 102 TRP X 163 SITE 2 AC4 6 HOH X 319 HOH X 352 SITE 1 AC5 8 HOH X 20 GLY X 44 ASN X 45 ALA X 68 SITE 2 AC5 8 HOH X 253 HOH X 354 HOH X 355 HOH X 356 SITE 1 AC6 12 LEU X 81 CYS X 82 THR X 83 GLY X 89 SITE 2 AC6 12 TYR X 90 LYS X 91 CYS X 203 MIO X 213 SITE 3 AC6 12 HOH X 238 HOH X 271 HOH X 377 HOH X 379 SITE 1 AC7 7 GLY X 84 GLY X 87 PHE X 88 GLY X 89 SITE 2 AC7 7 LYS X 91 MIO X 212 HOH X 377 CRYST1 57.222 57.222 87.009 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017476 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011493 0.00000