PDB Short entry for 3RLB HEADER THIAMINE-BINDING PROTEIN 19-APR-11 3RLB TITLE CRYSTAL STRUCTURE AT 2.0 A OF THE S-COMPONENT FOR THIAMIN FROM AN ECF- TITLE 2 TYPE ABC TRANSPORTER CAVEAT 3RLB BNG A 187 HAS WRONG CHIRALITY AT ATOM C1 BNG A 187 HAS WRONG CAVEAT 2 3RLB CHIRALITY AT ATOM C2 BNG A 187 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 3RLB C3 BNG A 187 HAS WRONG CHIRALITY AT ATOM C4 BNG A 187 HAS CAVEAT 4 3RLB WRONG CHIRALITY AT ATOM C5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIT; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. CREMORIS; SOURCE 3 ORGANISM_TAXID: 746361; SOURCE 4 STRAIN: NZ9000; SOURCE 5 GENE: LLNZ_01755; SOURCE 6 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS SUBSP. CREMORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 746361; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: NZ9000 KEYWDS S-COMPONENT, ECF TRANSPORTER, ABC TRANSPORTER, SUBSTRATE-BINDING KEYWDS 2 DOMAIN, MEMBRANE, THIAMINE-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.B.ERKENS,R.P.-A.BERNTSSON,F.FULYANI,M.MAJSNEROWSKA,A.VUJICIC-ZAGAR, AUTHOR 2 J.TER BEEK,B.POOLMAN,D.J.SLOTBOOM REVDAT 5 28-FEB-24 3RLB 1 HETSYN REVDAT 4 29-JUL-20 3RLB 1 CAVEAT COMPND REMARK SEQADV REVDAT 4 2 1 HETNAM HETSYN SITE REVDAT 3 20-JUL-11 3RLB 1 JRNL REVDAT 2 13-JUL-11 3RLB 1 JRNL REVDAT 1 29-JUN-11 3RLB 0 JRNL AUTH G.B.ERKENS,R.P.BERNTSSON,F.FULYANI,M.MAJSNEROWSKA, JRNL AUTH 2 J.TER BEEK,B.POOLMAN,D.J.SLOTBOOM JRNL TITL THE STRUCTURAL BASIS OF MODULARITY IN ECF-TYPE ABC JRNL TITL 2 TRANSPORTERS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 755 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 21706007 JRNL DOI 10.1038/NSMB.2073 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2165 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2856 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2741 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 194 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.958 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3021 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2075 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4086 ; 1.633 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5086 ; 1.134 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 353 ; 5.469 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;34.459 ;21.395 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 452 ;13.031 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;26.002 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 493 ; 0.134 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3085 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 643 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1751 ; 0.799 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 724 ; 0.263 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2821 ; 1.353 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1270 ; 2.225 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1265 ; 3.369 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 7 A 182 6 REMARK 3 1 B 7 B 182 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 2264 ; 0.49 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 2264 ; 1.35 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 8 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 182 REMARK 3 RESIDUE RANGE : B 6 B 182 REMARK 3 RESIDUE RANGE : A 192 A 228 REMARK 3 RESIDUE RANGE : B 188 B 223 REMARK 3 RESIDUE RANGE : A 183 A 189 REMARK 3 RESIDUE RANGE : B 183 B 186 REMARK 3 RESIDUE RANGE : A 191 A 191 REMARK 3 RESIDUE RANGE : B 187 B 187 REMARK 3 ORIGIN FOR THE GROUP (A): 30.0355 -14.4828 32.1430 REMARK 3 T TENSOR REMARK 3 T11: 0.0172 T22: 0.0736 REMARK 3 T33: 0.1134 T12: 0.0039 REMARK 3 T13: -0.0212 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.1666 L22: 1.4109 REMARK 3 L33: 3.3596 L12: -0.1374 REMARK 3 L13: -0.3581 L23: 0.9127 REMARK 3 S TENSOR REMARK 3 S11: -0.1034 S12: -0.0146 S13: 0.0385 REMARK 3 S21: -0.0095 S22: 0.0941 S23: 0.0502 REMARK 3 S31: -0.0975 S32: -0.1280 S33: 0.0092 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RLB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065072. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07225 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43288 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 47.585 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52900 REMARK 200 R SYM FOR SHELL (I) : 0.61800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE 2.15 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG3350, 0.2 M AMMONIUM NITRATE, REMARK 280 PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 30.82700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.32700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 30.82700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.32700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 PHE A 6 REMARK 465 MET B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 SER B 4 REMARK 465 LYS B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASN A 7 O HOH A 214 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 139 O LYS A 171 3545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 29 21.70 -141.33 REMARK 500 PHE A 173 53.57 -143.66 REMARK 500 TYR B 32 114.47 -160.37 REMARK 500 LEU B 86 -61.93 -121.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BNG A 183 REMARK 610 BNG A 184 REMARK 610 BNG A 186 REMARK 610 BNG A 188 REMARK 610 BNG B 183 REMARK 610 BNG B 185 DBREF 3RLB A 1 182 UNP D8KFM5 D8KFM5_LACLN 1 182 DBREF 3RLB B 1 182 UNP D8KFM5 D8KFM5_LACLN 1 182 SEQADV 3RLB MET A -9 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -8 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -7 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -6 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -5 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -4 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -3 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -2 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS A -1 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB ALA A 0 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB MET B -9 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -8 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -7 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -6 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -5 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -4 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -3 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -2 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB HIS B -1 UNP D8KFM5 EXPRESSION TAG SEQADV 3RLB ALA B 0 UNP D8KFM5 EXPRESSION TAG SEQRES 1 A 192 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA MET SER ASN SEQRES 2 A 192 SER LYS PHE ASN VAL ARG LEU LEU THR GLU ILE ALA PHE SEQRES 3 A 192 MET ALA ALA LEU ALA PHE ILE ILE SER LEU ILE PRO ASN SEQRES 4 A 192 THR VAL TYR GLY TRP ILE ILE VAL GLU ILE ALA CYS ILE SEQRES 5 A 192 PRO ILE LEU LEU LEU SER LEU ARG ARG GLY LEU THR ALA SEQRES 6 A 192 GLY LEU VAL GLY GLY LEU ILE TRP GLY ILE LEU SER MET SEQRES 7 A 192 ILE THR GLY HIS ALA TYR ILE LEU SER LEU SER GLN ALA SEQRES 8 A 192 PHE LEU GLU TYR LEU VAL ALA PRO VAL SER LEU GLY ILE SEQRES 9 A 192 ALA GLY LEU PHE ARG GLN LYS THR ALA PRO LEU LYS LEU SEQRES 10 A 192 ALA PRO VAL LEU LEU GLY THR PHE VAL ALA VAL LEU LEU SEQRES 11 A 192 LYS TYR PHE PHE HIS PHE ILE ALA GLY ILE ILE PHE TRP SEQRES 12 A 192 SER GLN TYR ALA TRP LYS GLY TRP GLY ALA VAL ALA TYR SEQRES 13 A 192 SER LEU ALA VAL ASN GLY ILE SER GLY ILE LEU THR ALA SEQRES 14 A 192 ILE ALA ALA PHE VAL ILE LEU ILE ILE PHE VAL LYS LYS SEQRES 15 A 192 PHE PRO LYS LEU PHE ILE HIS SER ASN TYR SEQRES 1 B 192 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA MET SER ASN SEQRES 2 B 192 SER LYS PHE ASN VAL ARG LEU LEU THR GLU ILE ALA PHE SEQRES 3 B 192 MET ALA ALA LEU ALA PHE ILE ILE SER LEU ILE PRO ASN SEQRES 4 B 192 THR VAL TYR GLY TRP ILE ILE VAL GLU ILE ALA CYS ILE SEQRES 5 B 192 PRO ILE LEU LEU LEU SER LEU ARG ARG GLY LEU THR ALA SEQRES 6 B 192 GLY LEU VAL GLY GLY LEU ILE TRP GLY ILE LEU SER MET SEQRES 7 B 192 ILE THR GLY HIS ALA TYR ILE LEU SER LEU SER GLN ALA SEQRES 8 B 192 PHE LEU GLU TYR LEU VAL ALA PRO VAL SER LEU GLY ILE SEQRES 9 B 192 ALA GLY LEU PHE ARG GLN LYS THR ALA PRO LEU LYS LEU SEQRES 10 B 192 ALA PRO VAL LEU LEU GLY THR PHE VAL ALA VAL LEU LEU SEQRES 11 B 192 LYS TYR PHE PHE HIS PHE ILE ALA GLY ILE ILE PHE TRP SEQRES 12 B 192 SER GLN TYR ALA TRP LYS GLY TRP GLY ALA VAL ALA TYR SEQRES 13 B 192 SER LEU ALA VAL ASN GLY ILE SER GLY ILE LEU THR ALA SEQRES 14 B 192 ILE ALA ALA PHE VAL ILE LEU ILE ILE PHE VAL LYS LYS SEQRES 15 B 192 PHE PRO LYS LEU PHE ILE HIS SER ASN TYR HET BNG A 183 10 HET BNG A 184 9 HET BNG A 185 21 HET BNG A 186 9 HET BNG A 187 21 HET BNG A 188 9 HET BNG A 189 21 HET VIB A 191 18 HET BNG B 183 8 HET BNG B 184 21 HET BNG B 185 8 HET BNG B 186 21 HET VIB B 187 18 HETNAM BNG NONYL BETA-D-GLUCOPYRANOSIDE HETNAM VIB 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY- HETNAM 2 VIB ETHYL)-4-METHYL-THIAZOL-3-IUM HETSYN BNG BETA-NONYLGLUCOSIDE; NONYL BETA-D-GLUCOSIDE; NONYL D- HETSYN 2 BNG GLUCOSIDE; NONYL GLUCOSIDE HETSYN VIB THIAMIN; VITAMIN B1 FORMUL 3 BNG 11(C15 H30 O6) FORMUL 10 VIB 2(C12 H17 N4 O S 1+) FORMUL 16 HOH *72(H2 O) HELIX 1 1 ASN A 7 SER A 25 1 19 HELIX 2 2 GLU A 38 ALA A 40 5 3 HELIX 3 3 CYS A 41 GLY A 52 1 12 HELIX 4 4 GLY A 52 THR A 70 1 19 HELIX 5 5 SER A 77 LEU A 86 1 10 HELIX 6 6 LEU A 86 LEU A 92 1 7 HELIX 7 7 GLY A 93 ARG A 99 5 7 HELIX 8 8 LYS A 106 TRP A 133 1 28 HELIX 9 9 SER A 134 ALA A 137 5 4 HELIX 10 10 GLY A 142 PHE A 173 1 32 HELIX 11 11 PRO A 174 ILE A 178 5 5 HELIX 12 12 PHE B 6 LEU B 26 1 21 HELIX 13 13 ALA B 40 GLY B 52 1 13 HELIX 14 14 GLY B 52 THR B 70 1 19 HELIX 15 15 SER B 77 LEU B 86 1 10 HELIX 16 16 LEU B 86 LEU B 92 1 7 HELIX 17 17 GLY B 93 ARG B 99 5 7 HELIX 18 18 LYS B 106 TRP B 133 1 28 HELIX 19 19 SER B 134 ALA B 137 5 4 HELIX 20 20 GLY B 142 PHE B 173 1 32 HELIX 21 21 PRO B 174 ILE B 178 5 5 SHEET 1 A 2 THR A 30 TYR A 32 0 SHEET 2 A 2 ILE A 35 ILE A 36 -1 O ILE A 35 N VAL A 31 SHEET 1 B 2 THR B 30 TYR B 32 0 SHEET 2 B 2 ILE B 35 ILE B 36 -1 O ILE B 35 N VAL B 31 CISPEP 1 ALA A 103 PRO A 104 0 -6.43 CISPEP 2 ALA B 103 PRO B 104 0 -3.53 CRYST1 61.654 84.654 127.301 90.00 95.81 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016220 0.000000 0.001650 0.00000 SCALE2 0.000000 0.011813 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007896 0.00000