PDB Short entry for 3RUT HEADER TRANSCRIPTION REGULATOR 05-MAY-11 3RUT TITLE FXR WITH SRC1 AND GSK359 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BILE ACID RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN (UNP RESIDUES 258-486); COMPND 5 SYNONYM: FXR, FARNESOID X-ACTIVATED RECEPTOR, FARNESOL RECEPTOR HRR- COMPND 6 1, NUCLEAR RECEPTOR SUBFAMILY 1 GROUP H MEMBER 4, RETINOID X COMPND 7 RECEPTOR-INTERACTING PROTEIN 14, RXR-INTERACTING PROTEIN 14; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 1; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 745-755; COMPND 13 SYNONYM: SRC1, NCOA-1, CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 74, COMPND 14 BHLHE74, PROTEIN HIN-2, RIP160, RENAL CARCINOMA ANTIGEN NY-REN-52, COMPND 15 STEROID RECEPTOR COACTIVATOR 1; COMPND 16 EC: 2.3.1.48; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAR, FXR, HRR1, NR1H4, RIP14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSETA; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, ALPHA-HELICAL SANDWICH, TRANSCRIPTION FACTOR, RXR, KEYWDS 2 TRANSCRIPTION CO-FACTORS, BILE ACID, FARNESOID, TRANSCRIPTION KEYWDS 3 REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR S.P.WILLIAMS,K.P.MADAUSS REVDAT 4 28-FEB-24 3RUT 1 REMARK REVDAT 3 08-NOV-17 3RUT 1 REMARK REVDAT 2 05-OCT-11 3RUT 1 JRNL REVDAT 1 21-SEP-11 3RUT 0 JRNL AUTH A.AKWABI-AMEYAW,J.A.CARAVELLA,L.CHEN,K.L.CREECH,D.N.DEATON, JRNL AUTH 2 K.P.MADAUSS,H.B.MARR,A.B.MILLER,F.NAVAS,D.J.PARKS, JRNL AUTH 3 P.K.SPEARING,D.TODD,S.P.WILLIAMS,G.B.WISELY JRNL TITL CONFORMATIONALLY CONSTRAINED FARNESOID X RECEPTOR (FXR) JRNL TITL 2 AGONISTS: ALTERNATIVE REPLACEMENTS OF THE STILBENE. JRNL REF BIOORG.MED.CHEM.LETT. V. 21 6154 2011 JRNL REFN ISSN 0960-894X JRNL PMID 21890356 JRNL DOI 10.1016/J.BMCL.2011.08.034 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 6705 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.400 REMARK 3 FREE R VALUE TEST SET COUNT : 497 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 470 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.4230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1871 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.457 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.376 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.887 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1963 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1242 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2676 ; 0.899 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3047 ; 0.807 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 238 ; 4.726 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;36.101 ;24.831 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;14.586 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;12.336 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.045 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2175 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 382 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1203 ; 0.356 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 474 ; 0.031 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1925 ; 0.664 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 760 ; 0.599 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 751 ; 1.077 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3RUT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7081 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.79900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350, 0.2 M LITHIUM SULFATE, REMARK 280 0.1 M BIS-TRIS, PH 6.5, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z+1/2 REMARK 290 15555 -X,Y+1/2,-Z+1/2 REMARK 290 16555 X,-Y+1/2,-Z+1/2 REMARK 290 17555 Z,X+1/2,Y+1/2 REMARK 290 18555 Z,-X+1/2,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y+1/2 REMARK 290 20555 -Z,X+1/2,-Y+1/2 REMARK 290 21555 Y,Z+1/2,X+1/2 REMARK 290 22555 -Y,Z+1/2,-X+1/2 REMARK 290 23555 Y,-Z+1/2,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X+1/2 REMARK 290 25555 X+1/2,Y,Z+1/2 REMARK 290 26555 -X+1/2,-Y,Z+1/2 REMARK 290 27555 -X+1/2,Y,-Z+1/2 REMARK 290 28555 X+1/2,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X,Y+1/2 REMARK 290 30555 Z+1/2,-X,-Y+1/2 REMARK 290 31555 -Z+1/2,-X,Y+1/2 REMARK 290 32555 -Z+1/2,X,-Y+1/2 REMARK 290 33555 Y+1/2,Z,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X+1/2 REMARK 290 35555 Y+1/2,-Z,-X+1/2 REMARK 290 36555 -Y+1/2,-Z,X+1/2 REMARK 290 37555 X+1/2,Y+1/2,Z REMARK 290 38555 -X+1/2,-Y+1/2,Z REMARK 290 39555 -X+1/2,Y+1/2,-Z REMARK 290 40555 X+1/2,-Y+1/2,-Z REMARK 290 41555 Z+1/2,X+1/2,Y REMARK 290 42555 Z+1/2,-X+1/2,-Y REMARK 290 43555 -Z+1/2,-X+1/2,Y REMARK 290 44555 -Z+1/2,X+1/2,-Y REMARK 290 45555 Y+1/2,Z+1/2,X REMARK 290 46555 -Y+1/2,Z+1/2,-X REMARK 290 47555 Y+1/2,-Z+1/2,-X REMARK 290 48555 -Y+1/2,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY1 37 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 37 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY3 37 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 38 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 38 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY3 38 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 39 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 39 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY3 39 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 40 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY2 40 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY3 40 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 41 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY2 41 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 41 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 42 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY2 42 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 42 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 43 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY2 43 -1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 43 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 44 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY2 44 1.000000 0.000000 0.000000 79.13700 REMARK 290 SMTRY3 44 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 45 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY2 45 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY3 45 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 46 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY2 46 0.000000 0.000000 1.000000 79.13700 REMARK 290 SMTRY3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 47 0.000000 1.000000 0.000000 79.13700 REMARK 290 SMTRY2 47 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY3 47 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 48 0.000000 -1.000000 0.000000 79.13700 REMARK 290 SMTRY2 48 0.000000 0.000000 -1.000000 79.13700 REMARK 290 SMTRY3 48 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 11 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 470 GLN A 250 CG CD OE1 NE2 REMARK 470 PHE A 255 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 262 CG CD CE NZ REMARK 470 GLN A 263 CG CD OE1 NE2 REMARK 470 ARG A 264 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 THR A 310 OG1 CG2 REMARK 470 GLU A 314 CG CD OE1 OE2 REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 LYS A 370 CG CD CE NZ REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 LYS A 399 CG CD CE NZ REMARK 470 GLU A 402 CG CD OE1 OE2 REMARK 470 GLU A 405 CG CD OE1 OE2 REMARK 470 LYS A 406 CG CD CE NZ REMARK 470 GLU A 409 CG CD OE1 OE2 REMARK 470 LYS A 417 CG CD CE NZ REMARK 470 LYS A 420 CG CD CE NZ REMARK 470 ILE A 421 CG1 CG2 CD1 REMARK 470 GLU A 425 CG CD OE1 OE2 REMARK 470 LYS A 460 CE NZ REMARK 470 VAL A 471 CG1 CG2 REMARK 470 GLN A 472 CG CD OE1 NE2 REMARK 470 ASP B 745 CG OD1 OD2 REMARK 470 ARG B 750 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 755 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 245 91.73 64.39 REMARK 500 LYS A 262 92.67 -61.56 REMARK 500 GLN A 263 97.07 -55.75 REMARK 500 SER A 355 32.71 -150.59 REMARK 500 LEU A 391 37.38 -94.59 REMARK 500 ARG A 395 153.71 -48.93 REMARK 500 LYS A 399 -70.64 -86.05 REMARK 500 ASN A 457 34.56 -97.63 REMARK 500 PHE A 461 -174.58 59.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 473 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 59G A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RUU RELATED DB: PDB REMARK 900 FXR WITH SRC1 AND GSK237 REMARK 900 RELATED ID: 3RVF RELATED DB: PDB REMARK 900 FXR WITH SRC1 AND GSK2034 DBREF 3RUT A 244 472 UNP Q96RI1 NR1H4_HUMAN 258 486 DBREF 3RUT B 745 755 UNP Q15788 NCOA1_HUMAN 745 755 SEQRES 1 A 229 GLU LEU THR PRO ASP GLN GLN THR LEU LEU HIS PHE ILE SEQRES 2 A 229 MET ASP SER TYR ASN LYS GLN ARG MET PRO GLN GLU ILE SEQRES 3 A 229 THR ASN LYS ILE LEU LYS GLU GLU PHE SER ALA GLU GLU SEQRES 4 A 229 ASN PHE LEU ILE LEU THR GLU MET ALA THR ASN HIS VAL SEQRES 5 A 229 GLN VAL LEU VAL GLU PHE THR LYS LYS LEU PRO GLY PHE SEQRES 6 A 229 GLN THR LEU ASP HIS GLU ASP GLN ILE ALA LEU LEU LYS SEQRES 7 A 229 GLY SER ALA VAL GLU ALA MET PHE LEU ARG SER ALA GLU SEQRES 8 A 229 ILE PHE ASN LYS LYS LEU PRO SER GLY HIS SER ASP LEU SEQRES 9 A 229 LEU GLU GLU ARG ILE ARG ASN SER GLY ILE SER ASP GLU SEQRES 10 A 229 TYR ILE THR PRO MET PHE SER PHE TYR LYS SER ILE GLY SEQRES 11 A 229 GLU LEU LYS MET THR GLN GLU GLU TYR ALA LEU LEU THR SEQRES 12 A 229 ALA ILE VAL ILE LEU SER PRO ASP ARG GLN TYR ILE LYS SEQRES 13 A 229 ASP ARG GLU ALA VAL GLU LYS LEU GLN GLU PRO LEU LEU SEQRES 14 A 229 ASP VAL LEU GLN LYS LEU CYS LYS ILE HIS GLN PRO GLU SEQRES 15 A 229 ASN PRO GLN HIS PHE ALA CYS LEU LEU GLY ARG LEU THR SEQRES 16 A 229 GLU LEU ARG THR PHE ASN HIS HIS HIS ALA GLU MET LEU SEQRES 17 A 229 MET SER TRP ARG VAL ASN ASP HIS LYS PHE THR PRO LEU SEQRES 18 A 229 LEU CYS GLU ILE TRP ASP VAL GLN SEQRES 1 B 11 ASP HIS GLN LEU LEU ARG TYR LEU LEU ASP LYS HET SO4 A 473 5 HET SO4 A 2 5 HET 59G A 1 36 HETNAM SO4 SULFATE ION HETNAM 59G 6-(4-{[3-(2,6-DICHLOROPHENYL)-5-(PROPAN-2-YL)-1,2- HETNAM 2 59G OXAZOL-4-YL]METHOXY}PHENYL)-1-BENZOTHIOPHENE-3- HETNAM 3 59G CARBOXYLIC ACID FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 59G C28 H21 CL2 N O4 S FORMUL 6 HOH *13(H2 O) HELIX 1 1 THR A 246 ASN A 261 1 16 HELIX 2 2 PRO A 266 ASN A 271 1 6 HELIX 3 3 ASN A 271 GLU A 276 1 6 HELIX 4 4 SER A 279 LYS A 304 1 26 HELIX 5 5 GLY A 307 LEU A 311 5 5 HELIX 6 6 ASP A 312 LYS A 338 1 27 HELIX 7 7 HIS A 344 ASN A 354 1 11 HELIX 8 8 SER A 358 GLU A 374 1 17 HELIX 9 9 THR A 378 LEU A 391 1 14 HELIX 10 10 ASP A 400 GLN A 423 1 24 HELIX 11 11 GLN A 428 VAL A 456 1 29 HELIX 12 12 THR A 462 TRP A 469 1 8 HELIX 13 13 HIS B 746 ASP B 754 1 9 SITE 1 AC1 5 ASN A 271 LYS A 275 SER A 279 ALA A 280 SITE 2 AC1 5 ASN A 354 SITE 1 AC2 3 LYS A 338 THR A 378 GLN A 379 SITE 1 AC3 14 MET A 265 THR A 270 LEU A 287 THR A 288 SITE 2 AC3 14 ALA A 291 HIS A 294 MET A 328 PHE A 329 SITE 3 AC3 14 ARG A 331 SER A 342 TYR A 369 HIS A 447 SITE 4 AC3 14 TRP A 454 LEU A 465 CRYST1 158.274 158.274 158.274 90.00 90.00 90.00 F 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006318 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006318 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006318 0.00000