PDB Short entry for 3SGR HEADER PROTEIN FIBRIL 15-JUN-11 3SGR TITLE TANDEM REPEAT OF AMYLOID-RELATED SEGMENT OF ALPHAB-CRYSTALLIN RESIDUES TITLE 2 90-100 MUTANT V91L COMPND MOL_ID: 1; COMPND 2 MOLECULE: TANDEM REPEAT OF AMYLOID-RELATED SEGMENT OF ALPHAB- COMPND 3 CRYSTALLIN RESIDUES 90-100 MUTANT V91L; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: CRYAB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15-MBP KEYWDS AMYLOID, AMYLOID OLIGOMER, BETA CYLINDRIN, PROTEIN FIBRIL EXPDTA X-RAY DIFFRACTION AUTHOR A.LAGANOWSKY,M.R.SAWAYA,D.CASCIO,D.EISENBERG REVDAT 2 26-JUL-17 3SGR 1 SOURCE REMARK REVDAT 1 21-MAR-12 3SGR 0 JRNL AUTH A.LAGANOWSKY,C.LIU,M.R.SAWAYA,J.P.WHITELEGGE,J.PARK,M.ZHAO, JRNL AUTH 2 A.PENSALFINI,A.B.SORIAGA,M.LANDAU,P.K.TENG,D.CASCIO,C.GLABE, JRNL AUTH 3 D.EISENBERG JRNL TITL ATOMIC VIEW OF A TOXIC AMYLOID SMALL OLIGOMER. JRNL REF SCIENCE V. 335 1228 2012 JRNL REFN ISSN 0036-8075 JRNL PMID 22403391 JRNL DOI 10.1126/SCIENCE.1213151 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 6421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.750 REMARK 3 FREE R VALUE TEST SET COUNT : 626 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.43 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1302 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2239 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1184 REMARK 3 BIN R VALUE (WORKING SET) : 0.2209 REMARK 3 BIN FREE R VALUE : 0.2549 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.06 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 118 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1078 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.54970 REMARK 3 B22 (A**2) : -3.54970 REMARK 3 B33 (A**2) : 7.09950 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.338 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1086 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1450 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 408 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 29 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 143 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1086 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 134 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1118 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.23 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.31 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -8.2293 -25.7999 -7.4886 REMARK 3 T TENSOR REMARK 3 T11: -0.1508 T22: 0.0123 REMARK 3 T33: 0.0459 T12: 0.1296 REMARK 3 T13: -0.0558 T23: -0.1014 REMARK 3 L TENSOR REMARK 3 L11: 5.9965 L22: 9.8338 REMARK 3 L33: 5.2982 L12: 4.6593 REMARK 3 L13: 1.5710 L23: 1.4364 REMARK 3 S TENSOR REMARK 3 S11: 0.2363 S12: -0.4493 S13: -0.1073 REMARK 3 S21: -0.0539 S22: -0.2949 S23: 0.0389 REMARK 3 S31: -0.1108 S32: -0.5060 S33: 0.0586 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -28.1533 -27.3348 -20.1207 REMARK 3 T TENSOR REMARK 3 T11: -0.2103 T22: -0.0324 REMARK 3 T33: -0.0060 T12: -0.0754 REMARK 3 T13: 0.0042 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 11.2618 L22: 3.5380 REMARK 3 L33: 12.2421 L12: 1.9452 REMARK 3 L13: 2.1811 L23: 2.1005 REMARK 3 S TENSOR REMARK 3 S11: 0.1893 S12: -0.5907 S13: 0.3793 REMARK 3 S21: 0.3741 S22: -0.2744 S23: 0.2237 REMARK 3 S31: -0.6644 S32: -0.0869 S33: 0.0851 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -2.9382 -26.6459 -4.9424 REMARK 3 T TENSOR REMARK 3 T11: -0.1361 T22: -0.1384 REMARK 3 T33: 0.0517 T12: 0.0875 REMARK 3 T13: 0.0479 T23: -0.0428 REMARK 3 L TENSOR REMARK 3 L11: 8.5834 L22: 8.9352 REMARK 3 L33: 8.4387 L12: -0.5569 REMARK 3 L13: 1.3748 L23: 1.2409 REMARK 3 S TENSOR REMARK 3 S11: 0.1150 S12: -0.5645 S13: -0.0357 REMARK 3 S21: 0.2446 S22: -0.2448 S23: -0.8802 REMARK 3 S31: -0.2187 S32: 0.1236 S33: 0.1298 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -4.7822 -28.9612 -10.1202 REMARK 3 T TENSOR REMARK 3 T11: -0.2360 T22: -0.0582 REMARK 3 T33: 0.0163 T12: 0.0669 REMARK 3 T13: -0.0292 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 9.7842 L22: 9.5459 REMARK 3 L33: 11.6849 L12: 3.8976 REMARK 3 L13: -0.2762 L23: 0.4545 REMARK 3 S TENSOR REMARK 3 S11: 0.0903 S12: 0.1567 S13: -0.3768 REMARK 3 S21: -0.7213 S22: -0.1703 S23: -0.3495 REMARK 3 S31: 0.0327 S32: -0.1168 S33: 0.0800 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): -26.5002 -32.0927 -21.9012 REMARK 3 T TENSOR REMARK 3 T11: -0.0881 T22: -0.0525 REMARK 3 T33: 0.0194 T12: 0.0072 REMARK 3 T13: -0.0290 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 17.6578 L22: 3.4230 REMARK 3 L33: 5.9663 L12: 1.5594 REMARK 3 L13: 3.0821 L23: 0.0458 REMARK 3 S TENSOR REMARK 3 S11: 0.9981 S12: -0.5042 S13: -0.9728 REMARK 3 S21: -0.0524 S22: -0.3747 S23: 0.0683 REMARK 3 S31: 0.5605 S32: -0.1868 S33: -0.6234 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { F|* } REMARK 3 ORIGIN FOR THE GROUP (A): -24.1500 -27.3546 -23.7617 REMARK 3 T TENSOR REMARK 3 T11: -0.1610 T22: -0.0548 REMARK 3 T33: 0.0080 T12: 0.0621 REMARK 3 T13: 0.0125 T23: 0.0404 REMARK 3 L TENSOR REMARK 3 L11: 10.3007 L22: 1.8119 REMARK 3 L33: 11.4310 L12: -2.1115 REMARK 3 L13: 2.7110 L23: -1.7037 REMARK 3 S TENSOR REMARK 3 S11: 0.1006 S12: 0.3852 S13: 0.4921 REMARK 3 S21: -0.1413 S22: -0.1871 S23: -0.2665 REMARK 3 S31: -0.7061 S32: 0.1118 S33: 0.0865 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SGR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066181. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8991 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 19.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CACODYLATE PH 6.5, 30% REMARK 280 MPD, 0.2M MAGNESIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.11000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.22000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.66500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.77500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 14.55500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A THREE STRANDED BETA CYLINDRIN. THE REMARK 300 ASYMMETRIC UNIT IS FORMED BY TWO BETA CYLINDRINS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -52.34000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 29.11000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 14.55500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU D 10 CG CD OE1 OE2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD E 25 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD E 26 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SGM RELATED DB: PDB REMARK 900 BROMODERIVATIVE-2 OF AMYLOID-RELATED SEGMENT OF ALPHAB-CRYSTALLIN REMARK 900 RESIDUES 90-100 REMARK 900 RELATED ID: 3SGN RELATED DB: PDB REMARK 900 BROMODERIVATIVE-8 OF AMYLOID-RELATED SEGMENT OF ALPHAB-CRYSTALLIN REMARK 900 RESIDUES 90-100 REMARK 900 RELATED ID: 3SGO RELATED DB: PDB REMARK 900 AMYLOID-RELATED SEGMENT OF ALPHAB-CRYSTALLIN RESIDUES 90-100 REMARK 900 RELATED ID: 3SGP RELATED DB: PDB REMARK 900 AMYLOID-RELATED SEGMENT OF ALPHAB-CRYSTALLIN RESIDUES 90-100 MUTANT REMARK 900 V91L REMARK 900 RELATED ID: 3SGS RELATED DB: PDB REMARK 900 AMYLOID-RELATED SEGMENT OF ALPHAB-CRYSTALLIN RESIDUES 95-100 DBREF 3SGR A 1 11 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR A 14 24 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR B 1 11 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR B 14 24 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR C 1 11 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR C 14 24 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR D 1 11 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR D 14 24 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR E 1 11 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR E 14 24 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR F 1 11 UNP P02511 CRYAB_HUMAN 90 100 DBREF 3SGR F 14 24 UNP P02511 CRYAB_HUMAN 90 100 SEQADV 3SGR GLY A 0 UNP P02511 EXPRESSION TAG SEQADV 3SGR LEU A 2 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY A 12 UNP P02511 LINKER SEQADV 3SGR GLY A 13 UNP P02511 LINKER SEQADV 3SGR LEU A 15 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY B 0 UNP P02511 EXPRESSION TAG SEQADV 3SGR LEU B 2 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY B 12 UNP P02511 LINKER SEQADV 3SGR GLY B 13 UNP P02511 LINKER SEQADV 3SGR LEU B 15 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY C 0 UNP P02511 EXPRESSION TAG SEQADV 3SGR LEU C 2 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY C 12 UNP P02511 LINKER SEQADV 3SGR GLY C 13 UNP P02511 LINKER SEQADV 3SGR LEU C 15 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY D 0 UNP P02511 EXPRESSION TAG SEQADV 3SGR LEU D 2 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY D 12 UNP P02511 LINKER SEQADV 3SGR GLY D 13 UNP P02511 LINKER SEQADV 3SGR LEU D 15 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY E 0 UNP P02511 EXPRESSION TAG SEQADV 3SGR LEU E 2 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY E 12 UNP P02511 LINKER SEQADV 3SGR GLY E 13 UNP P02511 LINKER SEQADV 3SGR LEU E 15 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY F 0 UNP P02511 EXPRESSION TAG SEQADV 3SGR LEU F 2 UNP P02511 VAL 91 ENGINEERED MUTATION SEQADV 3SGR GLY F 12 UNP P02511 LINKER SEQADV 3SGR GLY F 13 UNP P02511 LINKER SEQADV 3SGR LEU F 15 UNP P02511 VAL 91 ENGINEERED MUTATION SEQRES 1 A 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL GLY SEQRES 2 A 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL SEQRES 1 B 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL GLY SEQRES 2 B 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL SEQRES 1 C 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL GLY SEQRES 2 C 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL SEQRES 1 D 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL GLY SEQRES 2 D 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL SEQRES 1 E 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL GLY SEQRES 2 E 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL SEQRES 1 F 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL GLY SEQRES 2 F 25 GLY LYS LEU LYS VAL LEU GLY ASP VAL ILE GLU VAL HET MPD E 25 8 HET MPD E 26 8 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 7 MPD 2(C6 H14 O2) FORMUL 9 HOH *35(H2 O) SHEET 1 A 7 LEU A 2 VAL A 11 0 SHEET 2 A 7 LYS A 14 GLU A 23 -1 O LYS A 16 N ILE A 9 SHEET 3 A 7 LYS D 14 GLU D 23 -1 O LEU D 15 N VAL A 21 SHEET 4 A 7 LEU D 2 VAL D 11 -1 N LYS D 3 O ILE D 22 SHEET 5 A 7 LYS C 14 GLU C 23 -1 N GLY C 19 O VAL D 4 SHEET 6 A 7 LEU C 2 VAL C 11 -1 N LYS C 3 O ILE C 22 SHEET 7 A 7 LEU A 2 VAL A 11 -1 N VAL A 8 O LEU C 2 SHEET 1 B 7 LEU B 2 VAL B 11 0 SHEET 2 B 7 LYS B 14 GLU B 23 -1 O LYS B 16 N ILE B 9 SHEET 3 B 7 LYS F 14 GLU F 23 -1 O GLY F 19 N VAL B 17 SHEET 4 B 7 LEU F 2 VAL F 11 -1 N ILE F 9 O LYS F 16 SHEET 5 B 7 LYS E 1 VAL E 11 -1 N VAL E 4 O GLY F 6 SHEET 6 B 7 LYS E 14 VAL E 24 -1 O LYS E 16 N ILE E 9 SHEET 7 B 7 LEU B 2 VAL B 11 -1 N GLY B 6 O VAL E 17 SITE 1 AC1 3 VAL D 11 LEU E 2 VAL F 8 SITE 1 AC2 4 VAL B 8 LEU C 5 LEU E 15 HOH E 31 CRYST1 52.340 52.340 87.330 90.00 90.00 120.00 P 61 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019106 0.011031 0.000000 0.00000 SCALE2 0.000000 0.022062 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011451 0.00000