PDB Short entry for 3SY7 HEADER MEMBRANE PROTEIN 15-JUL-11 3SY7 TITLE IMPROVED CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OPRD COMPND MOL_ID: 1; COMPND 2 MOLECULE: PORIN D; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-443; COMPND 5 SYNONYM: IMIPENEM/BASIC AMINO ACID-SPECIFIC OUTER MEMBRANE PORE, COMPND 6 OUTER MEMBRANE PROTEIN D2; COMPND 7 EC: 3.4.21.-; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: OPRD, PA0958; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL, CHANNEL, OUTER MEMBRANE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG,E.EREN REVDAT 2 28-FEB-24 3SY7 1 REMARK SEQADV REVDAT 1 08-FEB-12 3SY7 0 JRNL AUTH E.EREN,J.VIJAYARAGHAVAN,J.LIU,B.R.CHENEKE,D.S.TOUW, JRNL AUTH 2 B.W.LEPORE,M.INDIC,L.MOVILEANU,B.VAN DEN BERG JRNL TITL SUBSTRATE SPECIFICITY WITHIN A FAMILY OF OUTER MEMBRANE JRNL TITL 2 CARBOXYLATE CHANNELS. JRNL REF PLOS BIOL. V. 10 01242 2012 JRNL REFN ISSN 1544-9173 JRNL PMID 22272184 JRNL DOI 10.1371/JOURNAL.PBIO.1001242 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 33514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9934 - 5.1512 0.99 2341 142 0.2417 0.2405 REMARK 3 2 5.1512 - 4.1003 1.00 2321 149 0.1764 0.1986 REMARK 3 3 4.1003 - 3.5853 1.00 2305 149 0.1871 0.2072 REMARK 3 4 3.5853 - 3.2591 1.00 2315 146 0.1831 0.2136 REMARK 3 5 3.2591 - 3.0263 1.00 2308 147 0.1746 0.2050 REMARK 3 6 3.0263 - 2.8484 1.00 2302 152 0.1817 0.2399 REMARK 3 7 2.8484 - 2.7061 1.00 2300 142 0.1829 0.2355 REMARK 3 8 2.7061 - 2.5886 1.00 2310 146 0.1683 0.2129 REMARK 3 9 2.5886 - 2.4891 1.00 2286 156 0.1835 0.2171 REMARK 3 10 2.4891 - 2.4034 1.00 2325 143 0.1966 0.2542 REMARK 3 11 2.4034 - 2.3284 1.00 2280 151 0.2114 0.2402 REMARK 3 12 2.3284 - 2.2619 0.98 2260 126 0.2493 0.3447 REMARK 3 13 2.2619 - 2.2024 0.91 2092 138 0.2469 0.2987 REMARK 3 14 2.2024 - 2.1488 0.77 1768 114 0.2469 0.3244 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.49 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 61.54 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.680 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.31240 REMARK 3 B22 (A**2) : -10.14500 REMARK 3 B33 (A**2) : 5.83260 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.95020 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3107 REMARK 3 ANGLE : 1.072 4173 REMARK 3 CHIRALITY : 0.079 424 REMARK 3 PLANARITY : 0.004 546 REMARK 3 DIHEDRAL : 19.873 1111 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 1:121) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1303 -8.4227 -0.0965 REMARK 3 T TENSOR REMARK 3 T11: 0.2003 T22: 0.2433 REMARK 3 T33: 0.2487 T12: -0.0263 REMARK 3 T13: -0.0094 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 3.2919 L22: 0.2353 REMARK 3 L33: 0.8148 L12: -0.8262 REMARK 3 L13: -0.2985 L23: 0.2426 REMARK 3 S TENSOR REMARK 3 S11: -0.0952 S12: 0.2997 S13: 0.1685 REMARK 3 S21: -0.0245 S22: 0.0082 S23: -0.0788 REMARK 3 S31: 0.0492 S32: 0.0086 S33: 0.1509 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 122:158) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0535 -10.4562 11.7003 REMARK 3 T TENSOR REMARK 3 T11: 0.2022 T22: 0.2764 REMARK 3 T33: 0.2318 T12: -0.0227 REMARK 3 T13: -0.0020 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.0478 L22: 1.5299 REMARK 3 L33: 2.7473 L12: -0.7588 REMARK 3 L13: -0.0128 L23: -0.0608 REMARK 3 S TENSOR REMARK 3 S11: -0.1534 S12: 0.1714 S13: 0.1897 REMARK 3 S21: 0.0530 S22: 0.0645 S23: -0.1817 REMARK 3 S31: -0.0453 S32: 0.1025 S33: 0.1336 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 159:304) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1743 -14.9053 23.0830 REMARK 3 T TENSOR REMARK 3 T11: 0.1931 T22: 0.1799 REMARK 3 T33: 0.1162 T12: 0.0357 REMARK 3 T13: 0.0264 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.7701 L22: 1.7323 REMARK 3 L33: 1.1167 L12: 0.0802 REMARK 3 L13: 0.2576 L23: -0.0272 REMARK 3 S TENSOR REMARK 3 S11: -0.0384 S12: -0.0122 S13: -0.0256 REMARK 3 S21: 0.1687 S22: 0.0531 S23: 0.0350 REMARK 3 S31: 0.0758 S32: -0.0194 S33: 0.0012 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 305:421) REMARK 3 ORIGIN FOR THE GROUP (A): 38.2418 -16.5240 15.7736 REMARK 3 T TENSOR REMARK 3 T11: 0.1859 T22: 0.1894 REMARK 3 T33: 0.2003 T12: 0.0443 REMARK 3 T13: -0.0118 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 1.4931 L22: 0.7892 REMARK 3 L33: 1.8579 L12: 0.4548 REMARK 3 L13: -0.0312 L23: 0.1213 REMARK 3 S TENSOR REMARK 3 S11: -0.0795 S12: -0.0564 S13: -0.0251 REMARK 3 S21: -0.0262 S22: 0.0025 S23: -0.0761 REMARK 3 S31: 0.0772 S32: 0.2232 S33: 0.1138 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.10 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33554 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULPHATE 50 MM NA REMARK 280 -CITRATE, PH 5.5, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 68.20400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.94600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 68.20400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 51.94600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROBABLE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 32 REMARK 465 LYS A 33 REMARK 465 SER A 34 REMARK 465 GLY A 35 REMARK 465 SER A 36 REMARK 465 GLY A 37 REMARK 465 SER A 77 REMARK 465 ASP A 78 REMARK 465 LYS A 79 REMARK 465 THR A 80 REMARK 465 GLY A 81 REMARK 465 THR A 82 REMARK 465 GLY A 83 REMARK 465 ASN A 84 REMARK 465 LEU A 85 REMARK 465 PRO A 86 REMARK 465 VAL A 87 REMARK 465 MET A 88 REMARK 465 ASN A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 LYS A 92 REMARK 465 PRO A 93 REMARK 465 ARG A 94 REMARK 465 GLY A 160 REMARK 465 LYS A 161 REMARK 465 GLU A 162 REMARK 465 PRO A 163 REMARK 465 THR A 164 REMARK 465 THR A 165 REMARK 465 VAL A 166 REMARK 465 LYS A 167 REMARK 465 SER A 168 REMARK 465 ARG A 169 REMARK 465 GLY A 170 REMARK 465 ARG A 287 REMARK 465 ASN A 288 REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 GLY A 422 REMARK 465 HIS A 423 REMARK 465 HIS A 424 REMARK 465 HIS A 425 REMARK 465 HIS A 426 REMARK 465 HIS A 427 REMARK 465 HIS A 428 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 11 CE NZ REMARK 470 GLU A 171 CB CG CD OE1 OE2 REMARK 470 LYS A 182 CE NZ REMARK 470 LYS A 243 CE NZ REMARK 470 LYS A 314 NZ REMARK 470 LYS A 348 NZ REMARK 470 LYS A 384 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 41 NZ LYS A 72 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 96 NE ARG A 237 1554 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 97 124.14 -174.18 REMARK 500 SER A 109 -119.70 52.23 REMARK 500 ASP A 208 17.93 59.51 REMARK 500 ASP A 263 -121.31 62.27 REMARK 500 VAL A 303 -160.47 -120.32 REMARK 500 TYR A 305 -65.63 -96.28 REMARK 500 ASP A 385 -12.06 78.96 REMARK 500 SER A 418 57.54 -151.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 429 REMARK 610 C8E A 430 REMARK 610 C8E A 431 REMARK 610 C8E A 432 REMARK 610 C8E A 433 REMARK 610 C8E A 434 REMARK 610 C8E A 435 REMARK 610 C8E A 436 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 431 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 432 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 433 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 434 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 435 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SY9 RELATED DB: PDB REMARK 900 RELATED ID: 3SYB RELATED DB: PDB REMARK 900 RELATED ID: 3SYS RELATED DB: PDB REMARK 900 RELATED ID: 3SZD RELATED DB: PDB REMARK 900 RELATED ID: 3SZV RELATED DB: PDB REMARK 900 RELATED ID: 3T0S RELATED DB: PDB REMARK 900 RELATED ID: 3T20 RELATED DB: PDB REMARK 900 RELATED ID: 2ODJ RELATED DB: PDB REMARK 900 RELATED ID: 3T24 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS HAVE STATED THAT THE RESIDUE 140 IS INDEED A VAL AND NOT A REMARK 999 PHE DBREF 3SY7 A 1 420 UNP P32722 PORD_PSEAE 24 443 SEQADV 3SY7 VAL A 140 UNP P32722 PHE 163 SEE REMARK 999 SEQADV 3SY7 GLY A 421 UNP P32722 EXPRESSION TAG SEQADV 3SY7 GLY A 422 UNP P32722 EXPRESSION TAG SEQADV 3SY7 HIS A 423 UNP P32722 EXPRESSION TAG SEQADV 3SY7 HIS A 424 UNP P32722 EXPRESSION TAG SEQADV 3SY7 HIS A 425 UNP P32722 EXPRESSION TAG SEQADV 3SY7 HIS A 426 UNP P32722 EXPRESSION TAG SEQADV 3SY7 HIS A 427 UNP P32722 EXPRESSION TAG SEQADV 3SY7 HIS A 428 UNP P32722 EXPRESSION TAG SEQRES 1 A 428 ASP ALA PHE VAL SER ASP GLN ALA GLU ALA LYS GLY PHE SEQRES 2 A 428 ILE GLU ASP SER SER LEU ASP LEU LEU LEU ARG ASN TYR SEQRES 3 A 428 TYR PHE ASN ARG ASP GLY LYS SER GLY SER GLY ASP ARG SEQRES 4 A 428 VAL ASP TRP THR GLN GLY PHE LEU THR THR TYR GLU SER SEQRES 5 A 428 GLY PHE THR GLN GLY THR VAL GLY PHE GLY VAL ASP ALA SEQRES 6 A 428 PHE GLY TYR LEU GLY LEU LYS LEU ASP GLY THR SER ASP SEQRES 7 A 428 LYS THR GLY THR GLY ASN LEU PRO VAL MET ASN ASP GLY SEQRES 8 A 428 LYS PRO ARG ASP ASP TYR SER ARG ALA GLY GLY ALA VAL SEQRES 9 A 428 LYS VAL ARG ILE SER LYS THR MET LEU LYS TRP GLY GLU SEQRES 10 A 428 MET GLN PRO THR ALA PRO VAL PHE ALA ALA GLY GLY SER SEQRES 11 A 428 ARG LEU PHE PRO GLN THR ALA THR GLY VAL GLN LEU GLN SEQRES 12 A 428 SER SER GLU PHE GLU GLY LEU ASP LEU GLU ALA GLY HIS SEQRES 13 A 428 PHE THR GLU GLY LYS GLU PRO THR THR VAL LYS SER ARG SEQRES 14 A 428 GLY GLU LEU TYR ALA THR TYR ALA GLY GLU THR ALA LYS SEQRES 15 A 428 SER ALA ASP PHE ILE GLY GLY ARG TYR ALA ILE THR ASP SEQRES 16 A 428 ASN LEU SER ALA SER LEU TYR GLY ALA GLU LEU GLU ASP SEQRES 17 A 428 ILE TYR ARG GLN TYR TYR LEU ASN SER ASN TYR THR ILE SEQRES 18 A 428 PRO LEU ALA SER ASP GLN SER LEU GLY PHE ASP PHE ASN SEQRES 19 A 428 ILE TYR ARG THR ASN ASP GLU GLY LYS ALA LYS ALA GLY SEQRES 20 A 428 ASP ILE SER ASN THR THR TRP SER LEU ALA ALA ALA TYR SEQRES 21 A 428 THR LEU ASP ALA HIS THR PHE THR LEU ALA TYR GLN LYS SEQRES 22 A 428 VAL HIS GLY ASP GLN PRO PHE ASP TYR ILE GLY PHE GLY SEQRES 23 A 428 ARG ASN GLY SER GLY ALA GLY GLY ASP SER ILE PHE LEU SEQRES 24 A 428 ALA ASN SER VAL GLN TYR SER ASP PHE ASN GLY PRO GLY SEQRES 25 A 428 GLU LYS SER TRP GLN ALA ARG TYR ASP LEU ASN LEU ALA SEQRES 26 A 428 SER TYR GLY VAL PRO GLY LEU THR PHE MET VAL ARG TYR SEQRES 27 A 428 ILE ASN GLY LYS ASP ILE ASP GLY THR LYS MET SER ASP SEQRES 28 A 428 ASN ASN VAL GLY TYR LYS ASN TYR GLY TYR GLY GLU ASP SEQRES 29 A 428 GLY LYS HIS HIS GLU THR ASN LEU GLU ALA LYS TYR VAL SEQRES 30 A 428 VAL GLN SER GLY PRO ALA LYS ASP LEU SER PHE ARG ILE SEQRES 31 A 428 ARG GLN ALA TRP HIS ARG ALA ASN ALA ASP GLN GLY GLU SEQRES 32 A 428 GLY ASP GLN ASN GLU PHE ARG LEU ILE VAL ASP TYR PRO SEQRES 33 A 428 LEU SER ILE LEU GLY GLY HIS HIS HIS HIS HIS HIS HET C8E A 429 10 HET C8E A 430 10 HET C8E A 431 9 HET C8E A 432 10 HET C8E A 433 10 HET C8E A 434 11 HET C8E A 435 11 HET C8E A 436 7 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE FORMUL 2 C8E 8(C16 H34 O5) FORMUL 10 HOH *130(H2 O) HELIX 1 1 ASP A 6 ALA A 10 5 5 HELIX 2 2 ASN A 353 TYR A 359 1 7 HELIX 3 3 ALA A 399 GLY A 402 5 4 SHEET 1 A20 ILE A 283 PHE A 285 0 SHEET 2 A20 LEU A 150 ALA A 174 -1 N TYR A 173 O GLY A 284 SHEET 3 A20 GLU A 179 THR A 194 -1 O ARG A 190 N ASP A 151 SHEET 4 A20 LEU A 197 LEU A 206 -1 O ALA A 199 N TYR A 191 SHEET 5 A20 TYR A 210 ALA A 224 -1 O GLN A 212 N ALA A 204 SHEET 6 A20 GLN A 227 ASP A 240 -1 O PHE A 233 N SER A 217 SHEET 7 A20 SER A 250 LEU A 262 -1 O ASN A 251 N THR A 238 SHEET 8 A20 HIS A 265 GLY A 276 -1 O HIS A 265 N LEU A 262 SHEET 9 A20 LYS A 314 ASN A 323 -1 O ARG A 319 N THR A 268 SHEET 10 A20 LEU A 332 ILE A 344 -1 O PHE A 334 N LEU A 322 SHEET 11 A20 GLY A 365 VAL A 377 -1 O GLU A 373 N MET A 335 SHEET 12 A20 SER A 387 ALA A 397 -1 O ARG A 396 N HIS A 368 SHEET 13 A20 GLN A 406 PRO A 416 -1 O GLN A 406 N HIS A 395 SHEET 14 A20 SER A 18 ASP A 31 -1 N ASN A 29 O PHE A 409 SHEET 15 A20 ARG A 39 GLU A 51 -1 O THR A 43 N TYR A 26 SHEET 16 A20 GLY A 60 GLY A 75 -1 O ALA A 65 N TYR A 50 SHEET 17 A20 ASP A 96 ILE A 108 -1 O ARG A 99 N TYR A 68 SHEET 18 A20 THR A 111 MET A 118 -1 O GLU A 117 N GLY A 102 SHEET 19 A20 ALA A 137 SER A 144 -1 O ALA A 137 N MET A 118 SHEET 20 A20 LEU A 150 ALA A 174 -1 O ALA A 154 N LEU A 142 SITE 1 AC1 2 ASN A 25 TRP A 42 SITE 1 AC2 2 THR A 55 PHE A 61 SITE 1 AC3 6 VAL A 63 GLY A 102 ALA A 103 TRP A 115 SITE 2 AC3 6 GLY A 116 HOH A 537 SITE 1 AC4 1 SER A 98 SITE 1 AC5 3 GLY A 155 PHE A 186 ILE A 187 SITE 1 AC6 4 GLY A 189 TYR A 191 ALA A 199 LEU A 201 SITE 1 AC7 3 LEU A 69 ASP A 96 TYR A 213 CRYST1 136.408 103.892 47.544 90.00 107.68 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007331 0.000000 0.002337 0.00000 SCALE2 0.000000 0.009625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022076 0.00000