PDB Short entry for 3TIN HEADER LIGASE 20-AUG-11 3TIN TITLE TUBULIN TYROSINE LIGASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TTL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS (SILURANA) TROPICALIS; SOURCE 3 ORGANISM_COMMON: WESTERN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8364; SOURCE 5 GENE: TTL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATP-GRASP, LIGASE, TUBULIN, TYROSINATION EXPDTA X-RAY DIFFRACTION AUTHOR A.ROLL-MECAK,A.SZYK,A.DEACONESCU,G.PISZCZEK REVDAT 3 28-FEB-24 3TIN 1 REMARK SEQADV LINK REVDAT 2 28-DEC-11 3TIN 1 JRNL REVDAT 1 26-OCT-11 3TIN 0 JRNL AUTH A.SZYK,A.M.DEACONESCU,G.PISZCZEK,A.ROLL-MECAK JRNL TITL TUBULIN TYROSINE LIGASE STRUCTURE REVEALS ADAPTATION OF AN JRNL TITL 2 ANCIENT FOLD TO BIND AND MODIFY TUBULIN. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 1250 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 22020298 JRNL DOI 10.1038/NSMB.2148 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 83472.400 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 8195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.313 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.600 REMARK 3 FREE R VALUE TEST SET COUNT : 865 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1128 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE : 0.4350 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 124 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2442 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : -0.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -28.55000 REMARK 3 B22 (A**2) : 4.72000 REMARK 3 B33 (A**2) : 23.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 19.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.60 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.54 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.77 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.870 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.250 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 6.810 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.970 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.510 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 50.01 REMARK 3 REMARK 3 NCS MODEL : NONE REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : ADP.PAR REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : ADP.TOP REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3TIN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067523. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99990 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8396 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.22600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES 7.0, 14% PEG8000, 5MM REMARK 280 MGCL2, 1MM ADP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K, REMARK 280 PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.48500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.86000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.48500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.86000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 103 REMARK 465 ASN A 104 REMARK 465 GLU A 105 REMARK 465 LYS A 106 REMARK 465 THR A 107 REMARK 465 PRO A 108 REMARK 465 ALA A 109 REMARK 465 MET A 110 REMARK 465 ARG A 111 REMARK 465 ALA A 112 REMARK 465 ARG A 113 REMARK 465 ASN A 114 REMARK 465 GLY A 115 REMARK 465 LEU A 116 REMARK 465 PRO A 117 REMARK 465 ASP A 118 REMARK 465 LEU A 119 REMARK 465 ALA A 120 REMARK 465 ASN A 121 REMARK 465 ALA A 122 REMARK 465 PRO A 123 REMARK 465 ARG A 124 REMARK 465 THR A 125 REMARK 465 ASP A 126 REMARK 465 ALA A 155 REMARK 465 LYS A 156 REMARK 465 GLY A 157 REMARK 465 GLU A 158 REMARK 465 PRO A 227 REMARK 465 TYR A 228 REMARK 465 SER A 229 REMARK 465 ASP A 230 REMARK 465 THR A 231 REMARK 465 ASN A 232 REMARK 465 PHE A 233 REMARK 465 GLN A 234 REMARK 465 ASP A 235 REMARK 465 MET A 236 REMARK 465 THR A 237 REMARK 465 SER A 238 REMARK 465 HIS A 239 REMARK 465 LEU A 240 REMARK 465 THR A 241 REMARK 465 ASN A 242 REMARK 465 HIS A 243 REMARK 465 CYS A 244 REMARK 465 ILE A 245 REMARK 465 GLN A 246 REMARK 465 LYS A 247 REMARK 465 GLU A 248 REMARK 465 HIS A 249 REMARK 465 SER A 250 REMARK 465 LYS A 251 REMARK 465 ASN A 252 REMARK 465 TYR A 253 REMARK 465 GLY A 254 REMARK 465 ARG A 255 REMARK 465 TYR A 256 REMARK 465 GLU A 257 REMARK 465 GLU A 258 REMARK 465 GLU A 364 REMARK 465 ASN A 365 REMARK 465 HIS A 366 REMARK 465 LYS A 367 REMARK 465 PRO A 368 REMARK 465 THR A 369 REMARK 465 GLU A 370 REMARK 465 ASP A 371 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 ARG A 46 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 69 CG OD1 OD2 REMARK 470 LYS A 79 CG CD CE NZ REMARK 470 THR A 83 OG1 CG2 REMARK 470 SER A 84 OG REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 ILE A 100 CG1 CG2 CD1 REMARK 470 GLU A 129 CG CD OE1 OE2 REMARK 470 SER A 133 OG REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 140 CG CD OE1 OE2 REMARK 470 ASP A 165 CG OD1 OD2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 ASP A 171 CG OD1 OD2 REMARK 470 ILE A 173 CG1 CG2 CD1 REMARK 470 VAL A 179 CG1 CG2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 SER A 225 OG REMARK 470 GLU A 226 CG CD OE1 OE2 REMARK 470 THR A 273 OG1 CG2 REMARK 470 SER A 274 OG REMARK 470 LEU A 275 CG CD1 CD2 REMARK 470 LYS A 341 CG CD CE NZ REMARK 470 LYS A 348 CG CD CE NZ REMARK 470 GLU A 363 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 36 NZ LYS A 36 2655 1.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 23 3.92 -65.91 REMARK 500 ARG A 32 -39.18 -28.69 REMARK 500 LYS A 36 51.90 -69.16 REMARK 500 ARG A 46 68.35 32.33 REMARK 500 PRO A 48 70.56 -65.77 REMARK 500 SER A 84 108.18 -37.05 REMARK 500 GLU A 86 20.73 -72.90 REMARK 500 LEU A 87 -54.59 -138.16 REMARK 500 ARG A 128 -17.43 62.04 REMARK 500 PHE A 131 -70.63 -62.59 REMARK 500 GLU A 142 97.19 47.19 REMARK 500 ASN A 145 57.59 -143.44 REMARK 500 SER A 152 -80.70 -46.68 REMARK 500 VAL A 179 91.81 59.32 REMARK 500 SER A 188 71.61 -111.12 REMARK 500 PRO A 194 -148.43 -75.62 REMARK 500 TYR A 211 44.69 89.59 REMARK 500 SER A 224 -155.44 -143.39 REMARK 500 ASN A 260 -152.19 -61.56 REMARK 500 GLU A 261 95.16 -162.68 REMARK 500 VAL A 272 -59.84 -137.95 REMARK 500 SER A 274 -24.09 169.74 REMARK 500 ASN A 276 65.79 -110.43 REMARK 500 ILE A 277 -167.86 -177.14 REMARK 500 SER A 282 -56.35 -161.13 REMARK 500 ILE A 283 -75.13 -78.28 REMARK 500 LYS A 288 4.52 -58.88 REMARK 500 PRO A 308 37.09 -90.12 REMARK 500 ILE A 330 -69.81 -104.23 REMARK 500 ALA A 337 -162.16 -103.46 REMARK 500 CYS A 338 -149.73 -139.85 REMARK 500 TYR A 343 -23.49 -35.03 REMARK 500 LEU A 346 -75.03 -75.88 REMARK 500 CYS A 347 -22.48 -39.19 REMARK 500 PRO A 360 172.91 -51.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 14 OH REMARK 620 2 ASN A 63 O 124.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TIG RELATED DB: PDB REMARK 900 RELATED ID: 3TII RELATED DB: PDB DBREF 3TIN A 2 377 UNP A9ULH4 A9ULH4_XENTR 2 377 SEQADV 3TIN GLY A -2 UNP A9ULH4 EXPRESSION TAG SEQADV 3TIN SER A -1 UNP A9ULH4 EXPRESSION TAG SEQADV 3TIN PHE A 0 UNP A9ULH4 EXPRESSION TAG SEQADV 3TIN THR A 1 UNP A9ULH4 EXPRESSION TAG SEQRES 1 A 380 GLY SER PHE THR TYR THR PHE VAL VAL ARG ASP GLU ASN SEQRES 2 A 380 SER THR VAL TYR ALA GLU VAL ALA LYS ILE LEU LEU ALA SEQRES 3 A 380 SER GLY GLN TRP LYS ARG LEU LYS ARG ASP ASN PRO LYS SEQRES 4 A 380 PHE ASN LEU MET LEU GLY GLU ARG ASN ARG LEU PRO PHE SEQRES 5 A 380 GLY ARG LEU GLY HIS GLU PRO GLY LEU VAL GLN LEU VAL SEQRES 6 A 380 ASN TYR TYR ARG GLY ALA ASP LYS LEU CYS ARG LYS ALA SEQRES 7 A 380 SER LEU VAL LYS LEU ILE LYS THR SER PRO GLU LEU THR SEQRES 8 A 380 GLU THR CYS THR TRP PHE PRO GLU SER TYR VAL ILE TYR SEQRES 9 A 380 PRO THR ASN GLU LYS THR PRO ALA MET ARG ALA ARG ASN SEQRES 10 A 380 GLY LEU PRO ASP LEU ALA ASN ALA PRO ARG THR ASP GLU SEQRES 11 A 380 ARG GLU GLU PHE ARG SER SER PHE ASN LYS LYS LYS GLU SEQRES 12 A 380 ASN GLU GLU GLY ASN VAL TRP ILE ALA LYS SER SER SER SEQRES 13 A 380 GLY ALA LYS GLY GLU GLY ILE LEU ILE SER SER ASP ALA SEQRES 14 A 380 THR GLU LEU LEU ASP PHE ILE ASP ASN GLN GLY GLN VAL SEQRES 15 A 380 HIS VAL ILE GLN LYS TYR LEU GLU SER PRO LEU LEU LEU SEQRES 16 A 380 GLU PRO GLY HIS ARG LYS PHE ASP ILE ARG SER TRP VAL SEQRES 17 A 380 LEU VAL ASP ASN GLN TYR ASN ILE TYR LEU TYR ARG GLU SEQRES 18 A 380 GLY VAL LEU ARG THR SER SER GLU PRO TYR SER ASP THR SEQRES 19 A 380 ASN PHE GLN ASP MET THR SER HIS LEU THR ASN HIS CYS SEQRES 20 A 380 ILE GLN LYS GLU HIS SER LYS ASN TYR GLY ARG TYR GLU SEQRES 21 A 380 GLU GLY ASN GLU MET PHE PHE GLU GLU PHE ASN GLN TYR SEQRES 22 A 380 LEU VAL THR SER LEU ASN ILE ASN LEU GLU ASN SER ILE SEQRES 23 A 380 LEU CYS GLN ILE LYS GLU ILE ILE ARG VAL CYS LEU SER SEQRES 24 A 380 CYS LEU GLU PRO ALA ILE SER THR LYS TYR LEU PRO TYR SEQRES 25 A 380 HIS SER PHE GLN LEU PHE GLY PHE ASP PHE MET VAL ASP SEQRES 26 A 380 LYS ASN LEU LYS VAL TRP LEU ILE GLU VAL ASN GLY ALA SEQRES 27 A 380 PRO ALA CYS ALA GLN LYS LEU TYR ALA GLU LEU CYS LYS SEQRES 28 A 380 GLY ILE VAL ASP LEU ALA ILE SER SER VAL PHE PRO LEU SEQRES 29 A 380 ASN GLU GLU ASN HIS LYS PRO THR GLU ASP ASN VAL PHE SEQRES 30 A 380 ILE LYS LEU HET ADP A 702 27 HET MG A 602 1 HET MG A 603 1 HET MG A 604 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 3(MG 2+) FORMUL 6 HOH *2(H2 O) HELIX 1 1 THR A 12 ALA A 23 1 12 HELIX 2 2 PRO A 48 LEU A 52 5 5 HELIX 3 3 ALA A 68 ARG A 73 1 6 HELIX 4 4 ARG A 73 SER A 84 1 12 HELIX 5 5 SER A 84 GLU A 89 1 6 HELIX 6 6 ARG A 128 GLU A 140 1 13 HELIX 7 7 ALA A 166 ASP A 171 1 6 HELIX 8 8 PHE A 264 LEU A 271 1 8 HELIX 9 9 SER A 282 CYS A 297 1 16 HELIX 10 10 LEU A 298 SER A 303 1 6 HELIX 11 11 LEU A 342 LYS A 348 1 7 HELIX 12 12 LYS A 348 LEU A 353 1 6 SHEET 1 A 5 TRP A 27 ARG A 29 0 SHEET 2 A 5 TYR A 2 VAL A 6 1 N PHE A 4 O LYS A 28 SHEET 3 A 5 LEU A 39 LEU A 41 1 O LEU A 41 N VAL A 5 SHEET 4 A 5 LEU A 61 VAL A 62 1 O LEU A 61 N MET A 40 SHEET 5 A 5 HIS A 310 SER A 311 1 O HIS A 310 N VAL A 62 SHEET 1 B 4 SER A 97 VAL A 99 0 SHEET 2 B 4 HIS A 180 LYS A 184 -1 O ILE A 182 N TYR A 98 SHEET 3 B 4 TRP A 147 SER A 151 -1 N ILE A 148 O GLN A 183 SHEET 4 B 4 ILE A 160 LEU A 161 -1 O LEU A 161 N ALA A 149 SHEET 1 C 5 GLU A 261 PHE A 263 0 SHEET 2 C 5 VAL A 220 THR A 223 -1 N LEU A 221 O MET A 262 SHEET 3 C 5 PHE A 199 ARG A 202 -1 N ASP A 200 O ARG A 222 SHEET 4 C 5 GLN A 313 VAL A 321 -1 O PHE A 319 N ILE A 201 SHEET 5 C 5 VAL A 327 ASN A 333 -1 O TRP A 328 N MET A 320 SHEET 1 D 7 GLU A 261 PHE A 263 0 SHEET 2 D 7 VAL A 220 THR A 223 -1 N LEU A 221 O MET A 262 SHEET 3 D 7 PHE A 199 ARG A 202 -1 N ASP A 200 O ARG A 222 SHEET 4 D 7 GLN A 313 VAL A 321 -1 O PHE A 319 N ILE A 201 SHEET 5 D 7 VAL A 205 VAL A 207 -1 N VAL A 205 O PHE A 315 SHEET 6 D 7 ILE A 213 TYR A 216 -1 O TYR A 214 N LEU A 206 SHEET 7 D 7 PHE A 374 LYS A 376 -1 O ILE A 375 N LEU A 215 LINK OH TYR A 14 MG MG A 602 1555 1555 2.84 LINK O ASN A 63 MG MG A 602 1555 1555 2.44 LINK OH TYR A 309 MG MG A 603 1555 1555 2.83 CISPEP 1 GLU A 193 PRO A 194 0 -0.18 SITE 1 AC1 8 LYS A 150 GLN A 183 LYS A 184 TYR A 185 SITE 2 AC1 8 LEU A 186 ASP A 200 MET A 320 GLU A 331 SITE 1 AC2 4 TYR A 14 ASN A 63 GLN A 313 LEU A 314 SITE 1 AC3 6 TYR A 64 TYR A 65 ARG A 66 THR A 304 SITE 2 AC3 6 TYR A 309 SER A 311 SITE 1 AC4 1 ASN A 209 CRYST1 116.970 75.720 44.230 90.00 90.83 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008549 0.000000 0.000124 0.00000 SCALE2 0.000000 0.013207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022611 0.00000