PDB Short entry for 3UEE HEADER CELL CYCLE 30-OCT-11 3UEE TITLE CRYSTAL STRUCTURE OF HUMAN SURVIVIN K62A MUTANT BOUND TO N-TERMINAL TITLE 2 HISTONE H3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: APOPTOSIS INHIBITOR 4, APOPTOSIS INHIBITOR SURVIVIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: N-TERMINAL FRAGMENT OF HISTONE H3; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: API4, BIRC5, IAP4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P8HIS; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS ZINC FINGER MOTIF, BIR DOMAIN, CHROMOSOMAL PASSENGER COMPLEX, CELL KEYWDS 2 DIVISION, MITOSIS, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR E.NIEDZIALKOWSKA,P.J.POREBSKI,F.WANG,J.M.HIGGINS,P.T.STUKENBERG, AUTHOR 2 W.MINOR REVDAT 4 13-SEP-23 3UEE 1 REMARK REVDAT 3 13-APR-22 3UEE 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 2 1 LINK REVDAT 2 25-JUL-12 3UEE 1 JRNL REVDAT 1 07-MAR-12 3UEE 0 JRNL AUTH E.NIEDZIALKOWSKA,F.WANG,P.J.POREBSKI,W.MINOR,J.M.HIGGINS, JRNL AUTH 2 P.T.STUKENBERG JRNL TITL MOLECULAR BASIS FOR PHOSPHOSPECIFIC RECOGNITION OF HISTONE JRNL TITL 2 H3 TAILS BY SURVIVIN PARALOGUES AT INNER CENTROMERES. JRNL REF MOL.BIOL.CELL V. 23 1457 2012 JRNL REFN ISSN 1059-1524 JRNL PMID 22357620 JRNL DOI 10.1091/MBC.E11-11-0904 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 14489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 768 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 995 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.3550 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.4770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2245 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.60000 REMARK 3 B22 (A**2) : -2.55000 REMARK 3 B33 (A**2) : 4.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.251 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.584 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2301 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1603 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3108 ; 1.790 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3904 ; 1.179 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ; 5.455 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;35.034 ;24.690 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 386 ;16.942 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.956 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 326 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2571 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 467 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): -26.9090 -35.6540 -8.1700 REMARK 3 T TENSOR REMARK 3 T11: 0.2955 T22: 0.0910 REMARK 3 T33: 0.1958 T12: -0.0406 REMARK 3 T13: -0.0017 T23: 0.0754 REMARK 3 L TENSOR REMARK 3 L11: 5.3485 L22: 9.7697 REMARK 3 L33: 2.4604 L12: -0.2525 REMARK 3 L13: -0.4401 L23: -1.0860 REMARK 3 S TENSOR REMARK 3 S11: -0.1494 S12: -0.0383 S13: 0.0393 REMARK 3 S21: 0.4853 S22: 0.0855 S23: 0.1412 REMARK 3 S31: 0.1176 S32: -0.0122 S33: 0.0639 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 5 C 90 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3070 -1.4930 -29.8380 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: 0.1085 REMARK 3 T33: 0.4376 T12: -0.0347 REMARK 3 T13: -0.0216 T23: 0.1100 REMARK 3 L TENSOR REMARK 3 L11: 6.2478 L22: 12.1056 REMARK 3 L33: 2.6838 L12: 0.6057 REMARK 3 L13: 1.2212 L23: -1.3236 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: 0.2983 S13: 0.7073 REMARK 3 S21: 0.1362 S22: -0.1191 S23: -0.6613 REMARK 3 S31: -0.1633 S32: 0.4606 S33: 0.1475 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): -29.2590 -21.7250 2.7640 REMARK 3 T TENSOR REMARK 3 T11: 0.5435 T22: 0.0120 REMARK 3 T33: 0.3731 T12: 0.0179 REMARK 3 T13: 0.0462 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.1563 L22: 0.0122 REMARK 3 L33: 27.3210 L12: 0.1079 REMARK 3 L13: -4.1811 L23: 0.1383 REMARK 3 S TENSOR REMARK 3 S11: -0.1360 S12: -0.0066 S13: 0.3134 REMARK 3 S21: 0.0030 S22: -0.0047 S23: 0.0410 REMARK 3 S31: 0.4896 S32: -0.3385 S33: 0.1406 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 91 C 142 REMARK 3 ORIGIN FOR THE GROUP (A): 2.3240 -15.9340 -32.0930 REMARK 3 T TENSOR REMARK 3 T11: 0.3063 T22: 0.0481 REMARK 3 T33: 0.6042 T12: 0.0475 REMARK 3 T13: 0.1022 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 30.2343 L22: 0.1174 REMARK 3 L33: 2.2569 L12: 0.8157 REMARK 3 L13: -5.2733 L23: -0.4712 REMARK 3 S TENSOR REMARK 3 S11: 0.2154 S12: 0.5241 S13: 0.4212 REMARK 3 S21: -0.0641 S22: 0.0113 S23: 0.0186 REMARK 3 S31: -0.0174 S32: -0.0973 S33: -0.2267 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UEE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) DIAMOND LAUE REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BERYLLIUM LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15257 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 38.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: 3UEC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 3350, 0.12 M SUCCINIC ACID, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.94400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.43600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.94400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.43600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 GLU A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 142 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 HIS C -1 REMARK 465 GLU C 0 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 ALA C 3 REMARK 465 PRO C 4 REMARK 465 THR B 6 REMARK 465 ALA B 7 REMARK 465 ARG B 8 REMARK 465 LYS B 9 REMARK 465 SER B 10 REMARK 465 THR B 11 REMARK 465 GLY B 12 REMARK 465 THR D 6 REMARK 465 ALA D 7 REMARK 465 ARG D 8 REMARK 465 LYS D 9 REMARK 465 SER D 10 REMARK 465 THR D 11 REMARK 465 GLY D 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 LYS A 79 CD CE NZ REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 103 CE NZ REMARK 470 LYS A 110 CE NZ REMARK 470 LYS A 122 CE NZ REMARK 470 ARG A 133 CG CD NE CZ NH1 NH2 REMARK 470 MET A 141 CG SD CE REMARK 470 THR C 5 OG1 CG2 REMARK 470 LYS C 23 CG CD CE NZ REMARK 470 ASN C 24 CG OD1 ND2 REMARK 470 GLU C 49 CG CD OE1 OE2 REMARK 470 LYS C 90 CG CD CE NZ REMARK 470 LYS C 103 CD CE NZ REMARK 470 LYS C 110 CG CD CE NZ REMARK 470 LYS C 129 CD CE NZ REMARK 470 ARG C 133 NE CZ NH1 NH2 REMARK 470 ASP C 142 CG OD1 OD2 REMARK 470 LYS D 4 CE NZ REMARK 470 GLN D 5 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 28 -144.70 -117.63 REMARK 500 CYS A 33 57.36 -93.42 REMARK 500 SER A 81 66.72 -160.80 REMARK 500 LEU C 28 -146.25 -118.77 REMARK 500 CYS C 33 58.10 -92.48 REMARK 500 SER C 81 68.05 -158.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 143 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 57 SG REMARK 620 2 CYS A 60 SG 104.5 REMARK 620 3 HIS A 77 NE2 106.5 105.3 REMARK 620 4 CYS A 84 SG 117.8 114.2 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 143 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 57 SG REMARK 620 2 CYS C 60 SG 105.9 REMARK 620 3 HIS C 77 NE2 106.4 105.7 REMARK 620 4 CYS C 84 SG 116.1 114.9 107.1 REMARK 620 N 1 2 3 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN B OF N-TERMINAL FRAGMENT REMARK 800 OF HISTONE H3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF N-TERMINAL FRAGMENT REMARK 800 OF HISTONE H3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UEC RELATED DB: PDB REMARK 900 RELATED ID: 3UED RELATED DB: PDB REMARK 900 RELATED ID: 3UEF RELATED DB: PDB REMARK 900 RELATED ID: 3UEG RELATED DB: PDB REMARK 900 RELATED ID: 3UEH RELATED DB: PDB REMARK 900 RELATED ID: 3UEI RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 E129K REPRESENTS A NATURAL VARIANT DBREF 3UEE A 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 3UEE C 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 3UEE B 1 12 PDB 3UEE 3UEE 1 12 DBREF 3UEE D 1 12 PDB 3UEE 3UEE 1 12 SEQADV 3UEE GLY A -3 UNP O15392 EXPRESSION TAG SEQADV 3UEE SER A -2 UNP O15392 EXPRESSION TAG SEQADV 3UEE HIS A -1 UNP O15392 EXPRESSION TAG SEQADV 3UEE GLU A 0 UNP O15392 EXPRESSION TAG SEQADV 3UEE ALA A 62 UNP O15392 LYS 62 ENGINEERED MUTATION SEQADV 3UEE LYS A 129 UNP O15392 GLU 129 SEE REMARK 999 SEQADV 3UEE GLY C -3 UNP O15392 EXPRESSION TAG SEQADV 3UEE SER C -2 UNP O15392 EXPRESSION TAG SEQADV 3UEE HIS C -1 UNP O15392 EXPRESSION TAG SEQADV 3UEE GLU C 0 UNP O15392 EXPRESSION TAG SEQADV 3UEE ALA C 62 UNP O15392 LYS 62 ENGINEERED MUTATION SEQADV 3UEE LYS C 129 UNP O15392 GLU 129 SEE REMARK 999 SEQRES 1 A 146 GLY SER HIS GLU MET GLY ALA PRO THR LEU PRO PRO ALA SEQRES 2 A 146 TRP GLN PRO PHE LEU LYS ASP HIS ARG ILE SER THR PHE SEQRES 3 A 146 LYS ASN TRP PRO PHE LEU GLU GLY CYS ALA CYS THR PRO SEQRES 4 A 146 GLU ARG MET ALA GLU ALA GLY PHE ILE HIS CYS PRO THR SEQRES 5 A 146 GLU ASN GLU PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE SEQRES 6 A 146 ALA GLU LEU GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE SEQRES 7 A 146 GLU GLU HIS LYS LYS HIS SER SER GLY CYS ALA PHE LEU SEQRES 8 A 146 SER VAL LYS LYS GLN PHE GLU GLU LEU THR LEU GLY GLU SEQRES 9 A 146 PHE LEU LYS LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE SEQRES 10 A 146 ALA LYS GLU THR ASN ASN LYS LYS LYS GLU PHE GLU GLU SEQRES 11 A 146 THR ALA LYS LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA SEQRES 12 A 146 ALA MET ASP SEQRES 1 C 146 GLY SER HIS GLU MET GLY ALA PRO THR LEU PRO PRO ALA SEQRES 2 C 146 TRP GLN PRO PHE LEU LYS ASP HIS ARG ILE SER THR PHE SEQRES 3 C 146 LYS ASN TRP PRO PHE LEU GLU GLY CYS ALA CYS THR PRO SEQRES 4 C 146 GLU ARG MET ALA GLU ALA GLY PHE ILE HIS CYS PRO THR SEQRES 5 C 146 GLU ASN GLU PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE SEQRES 6 C 146 ALA GLU LEU GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE SEQRES 7 C 146 GLU GLU HIS LYS LYS HIS SER SER GLY CYS ALA PHE LEU SEQRES 8 C 146 SER VAL LYS LYS GLN PHE GLU GLU LEU THR LEU GLY GLU SEQRES 9 C 146 PHE LEU LYS LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE SEQRES 10 C 146 ALA LYS GLU THR ASN ASN LYS LYS LYS GLU PHE GLU GLU SEQRES 11 C 146 THR ALA LYS LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA SEQRES 12 C 146 ALA MET ASP SEQRES 1 B 12 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 1 D 12 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY HET ZN A 143 1 HET ZN C 143 1 HETNAM ZN ZINC ION FORMUL 5 ZN 2(ZN 2+) FORMUL 7 HOH *30(H2 O) HELIX 1 1 PRO A 8 PHE A 13 5 6 HELIX 2 2 LYS A 15 THR A 21 1 7 HELIX 3 3 PRO A 35 ALA A 41 1 7 HELIX 4 4 PRO A 73 HIS A 80 1 8 HELIX 5 5 ALA A 85 SER A 88 5 4 HELIX 6 6 PHE A 93 GLU A 95 5 3 HELIX 7 7 LEU A 98 MET A 141 1 44 HELIX 8 8 PRO C 8 PHE C 13 5 6 HELIX 9 9 LYS C 15 THR C 21 1 7 HELIX 10 10 PRO C 35 ALA C 41 1 7 HELIX 11 11 PRO C 73 HIS C 80 1 8 HELIX 12 12 ALA C 85 SER C 88 5 4 HELIX 13 13 PHE C 93 GLU C 95 5 3 HELIX 14 14 LEU C 98 MET C 141 1 44 SHEET 1 A 3 PHE A 43 HIS A 45 0 SHEET 2 A 3 ALA A 55 CYS A 57 -1 O GLN A 56 N ILE A 44 SHEET 3 A 3 PHE A 61 LEU A 64 -1 O LEU A 64 N ALA A 55 SHEET 1 B 3 PHE C 43 HIS C 45 0 SHEET 2 B 3 ALA C 55 CYS C 57 -1 O GLN C 56 N ILE C 44 SHEET 3 B 3 PHE C 61 LEU C 64 -1 O LEU C 64 N ALA C 55 LINK SG CYS A 57 ZN ZN A 143 1555 1555 2.19 LINK SG CYS A 60 ZN ZN A 143 1555 1555 2.32 LINK NE2 HIS A 77 ZN ZN A 143 1555 1555 2.05 LINK SG CYS A 84 ZN ZN A 143 1555 1555 2.29 LINK SG CYS C 57 ZN ZN C 143 1555 1555 2.20 LINK SG CYS C 60 ZN ZN C 143 1555 1555 2.34 LINK NE2 HIS C 77 ZN ZN C 143 1555 1555 2.09 LINK SG CYS C 84 ZN ZN C 143 1555 1555 2.29 SITE 1 AC1 4 CYS A 57 CYS A 60 HIS A 77 CYS A 84 SITE 1 AC2 4 CYS C 57 CYS C 60 HIS C 77 CYS C 84 SITE 1 AC3 10 GLU A 51 GLU A 63 LEU A 64 GLU A 65 SITE 2 AC3 10 GLY A 66 TRP A 67 ASP A 71 GLU A 76 SITE 3 AC3 10 HIS A 80 HOH B 157 SITE 1 AC4 7 GLU C 63 LEU C 64 GLU C 65 GLY C 66 SITE 2 AC4 7 ASP C 71 GLU C 76 HIS C 80 CRYST1 113.888 70.872 82.037 90.00 129.52 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008781 0.000000 0.007243 0.00000 SCALE2 0.000000 0.014110 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015802 0.00000