PDB Short entry for 3UF8 HEADER ISOMERASE, PROTEIN BINDING 31-OCT-11 3UF8 TITLE CRYSTAL STRUCTURE OF A SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE TITLE 2 WITH A G95A SURFACE MUTATION FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED TITLE 3 WITH FK506 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-LIKE PROTEIN SMT3, PEPTIDYL-PROLYL CIS-TRANS COMPND 3 ISOMERASE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: Q12306 RESIDUES 13-98, Q3JK38 RESIDUES 2-113; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: FUSION PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE, BURKHOLDERIA SOURCE 3 PSEUDOMALLEI; SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292, 320372; SOURCE 6 STRAIN: 1710B, S288C; SOURCE 7 GENE: BURPS1710B_A0907, SMT3, YDR510W, D9719.15; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET28-HISSMT KEYWDS SSGCID, ISOMERASE, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 2 DISEASE, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 6 28-FEB-24 3UF8 1 REMARK SEQADV REVDAT 5 23-AUG-17 3UF8 1 SOURCE REMARK REVDAT 4 19-MAR-14 3UF8 1 REMARK REVDAT 3 12-MAR-14 3UF8 1 JRNL REVDAT 2 30-NOV-11 3UF8 1 JRNL REMARK TITLE REVDAT 1 09-NOV-11 3UF8 0 JRNL AUTH D.W.BEGLEY,D.FOX,D.JENNER,C.JULI,P.G.PIERCE,J.ABENDROTH, JRNL AUTH 2 M.MURUTHI,K.SAFFORD,V.ANDERSON,K.ATKINS,S.R.BARNES,S.O.MOEN, JRNL AUTH 3 A.C.RAYMOND,R.STACY,P.J.MYLER,B.L.STAKER,N.J.HARMER, JRNL AUTH 4 I.H.NORVILLE,U.HOLZGRABE,M.SARKAR-TYSON,T.E.EDWARDS, JRNL AUTH 5 D.D.LORIMER JRNL TITL A STRUCTURAL BIOLOGY APPROACH ENABLES THE DEVELOPMENT OF JRNL TITL 2 ANTIMICROBIALS TARGETING BACTERIAL IMMUNOPHILINS. JRNL REF ANTIMICROB.AGENTS CHEMOTHER. V. 58 1458 2014 JRNL REFN ISSN 0066-4804 JRNL PMID 24366729 JRNL DOI 10.1128/AAC.01875-13 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29406 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1495 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1927 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.2100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1446 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 263 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.95000 REMARK 3 B22 (A**2) : -0.36000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.28000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.502 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1598 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1081 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2180 ; 1.530 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2662 ; 0.874 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 6.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;32.017 ;25.143 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 262 ;11.333 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;10.444 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 247 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1803 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 313 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 92 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3408 -6.7065 66.8824 REMARK 3 T TENSOR REMARK 3 T11: 0.0064 T22: 0.0247 REMARK 3 T33: 0.0268 T12: 0.0007 REMARK 3 T13: -0.0007 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.0631 L22: 1.4452 REMARK 3 L33: 1.2958 L12: -0.1675 REMARK 3 L13: 0.0359 L23: -0.4450 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: 0.0230 S13: 0.0189 REMARK 3 S21: -0.0003 S22: -0.0395 S23: -0.1814 REMARK 3 S31: 0.0002 S32: 0.1580 S33: 0.0384 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4252 -3.6087 69.4633 REMARK 3 T TENSOR REMARK 3 T11: 0.0085 T22: 0.0160 REMARK 3 T33: 0.0294 T12: -0.0016 REMARK 3 T13: 0.0008 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.0666 L22: 1.1363 REMARK 3 L33: 1.7443 L12: -0.5919 REMARK 3 L13: -0.5045 L23: 0.4095 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: -0.0619 S13: 0.0758 REMARK 3 S21: 0.0112 S22: 0.0084 S23: -0.1023 REMARK 3 S31: -0.0204 S32: 0.1084 S33: 0.0088 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES: WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 3UF8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068679. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : SI(220) ASYMMETRIC CUT SINGLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC Q315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29417 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.030 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR, MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: INTERNAL TRACKING NUMBER 226425. JCSG REMARK 280 WELL A8. 0.2M AMMONIUM FORMATE, 20.0% W/V PEG3500, PEG400 CRYO. REMARK 280 BUPSA.00130.A.D242 PD00198 21.4MG/ML, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 16.38500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 RESIDUE -95 TO 1 IS PART OF THE SOLUBILITY AND PURIFICATION TAG REMARK 400 THAT WAS NOT REMOVED REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -95 REMARK 465 GLY A -94 REMARK 465 HIS A -93 REMARK 465 HIS A -92 REMARK 465 HIS A -91 REMARK 465 HIS A -90 REMARK 465 HIS A -89 REMARK 465 HIS A -88 REMARK 465 SER A -87 REMARK 465 GLY A -86 REMARK 465 GLU A -85 REMARK 465 VAL A -84 REMARK 465 LYS A -83 REMARK 465 PRO A -82 REMARK 465 GLU A -81 REMARK 465 VAL A -80 REMARK 465 LYS A -79 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A -77 CG CD OE1 OE2 REMARK 470 LYS A -40 CG CD CE NZ REMARK 470 ASP A -37 CG OD1 OD2 REMARK 470 ARG A -5 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A -18 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 97 -51.32 -132.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FK5 A 114 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KEO RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM REMARK 900 BURKHOLDERIA PSEUDOMALLEI REMARK 900 RELATED ID: 2L2S RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM REMARK 900 BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH 1-{[(4-METHYLPHENYL)THIO] REMARK 900 ACETYL}PIPERIDINE REMARK 900 RELATED ID: 2KO7 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM REMARK 900 BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH CYCLOHEXIMIDE-N- REMARK 900 ETHYLETHANOATE REMARK 900 RELATED ID: 17151 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM REMARK 900 BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH 1-{[(4-METHYLPHENYL)THIO] REMARK 900 ACETYL}PIPERIDINE REMARK 900 RELATED ID: 16491 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM REMARK 900 BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH 1-{[(4-METHYLPHENYL)THIO] REMARK 900 ACETYL}PIPERIDINE REMARK 900 RELATED ID: 16406 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM REMARK 900 BURKHOLDERIA PSEUDOMALLEI REMARK 900 RELATED ID: SSGCID-BUPSA.00130.A RELATED DB: TARGETTRACK DBREF 3UF8 A -85 0 UNP Q12306 SMT3_YEAST 13 98 DBREF 3UF8 A 2 113 UNP Q3JK38 Q3JK38_BURP1 2 113 SEQADV 3UF8 MET A -95 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 GLY A -94 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 HIS A -93 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 HIS A -92 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 HIS A -91 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 HIS A -90 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 HIS A -89 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 HIS A -88 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 SER A -87 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 GLY A -86 UNP Q12306 EXPRESSION TAG SEQADV 3UF8 SER A 1 UNP Q12306 LINKER SEQADV 3UF8 ALA A 95 UNP Q3JK38 GLY 95 ENGINEERED MUTATION SEQRES 1 A 209 MET GLY HIS HIS HIS HIS HIS HIS SER GLY GLU VAL LYS SEQRES 2 A 209 PRO GLU VAL LYS PRO GLU THR HIS ILE ASN LEU LYS VAL SEQRES 3 A 209 SER ASP GLY SER SER GLU ILE PHE PHE LYS ILE LYS LYS SEQRES 4 A 209 THR THR PRO LEU ARG ARG LEU MET GLU ALA PHE ALA LYS SEQRES 5 A 209 ARG GLN GLY LYS GLU MET ASP SER LEU ARG PHE LEU TYR SEQRES 6 A 209 ASP GLY ILE ARG ILE GLN ALA ASP GLN THR PRO GLU ASP SEQRES 7 A 209 LEU ASP MET GLU ASP ASN ASP ILE ILE GLU ALA HIS ARG SEQRES 8 A 209 GLU GLN ILE GLY GLY SER THR VAL VAL THR THR GLU SER SEQRES 9 A 209 GLY LEU LYS TYR GLU ASP LEU THR GLU GLY SER GLY ALA SEQRES 10 A 209 GLU ALA ARG ALA GLY GLN THR VAL SER VAL HIS TYR THR SEQRES 11 A 209 GLY TRP LEU THR ASP GLY GLN LYS PHE ASP SER SER LYS SEQRES 12 A 209 ASP ARG ASN ASP PRO PHE ALA PHE VAL LEU GLY GLY GLY SEQRES 13 A 209 MET VAL ILE LYS GLY TRP ASP GLU GLY VAL GLN GLY MET SEQRES 14 A 209 LYS VAL GLY GLY VAL ARG ARG LEU THR ILE PRO PRO GLN SEQRES 15 A 209 LEU GLY TYR GLY ALA ARG GLY ALA ALA GLY VAL ILE PRO SEQRES 16 A 209 PRO ASN ALA THR LEU VAL PHE GLU VAL GLU LEU LEU ASP SEQRES 17 A 209 VAL HET FK5 A 114 59 HETNAM FK5 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN HETSYN FK5 K506 FORMUL 2 FK5 C44 H69 N O12 FORMUL 3 HOH *263(H2 O) HELIX 1 1 LEU A -53 GLY A -41 1 13 HELIX 2 2 GLU A -39 LEU A -35 5 5 HELIX 3 3 LYS A 47 ASN A 50 5 4 HELIX 4 4 ILE A 63 GLN A 71 1 9 HELIX 5 5 PRO A 84 GLY A 88 5 5 SHEET 1 A 5 GLU A -64 LYS A -58 0 SHEET 2 A 5 HIS A -75 SER A -69 -1 N LEU A -72 O PHE A -61 SHEET 3 A 5 ASP A -11 HIS A -6 1 O ILE A -9 N LYS A -71 SHEET 4 A 5 ARG A -34 TYR A -31 -1 N ARG A -34 O HIS A -6 SHEET 5 A 5 ILE A -28 ARG A -27 -1 O ILE A -28 N TYR A -31 SHEET 1 B 6 VAL A 4 THR A 5 0 SHEET 2 B 6 LYS A 11 THR A 16 -1 O TYR A 12 N VAL A 4 SHEET 3 B 6 VAL A 78 ILE A 83 -1 O ARG A 80 N GLU A 13 SHEET 4 B 6 LEU A 104 ASP A 112 -1 O LEU A 104 N ILE A 83 SHEET 5 B 6 THR A 28 LEU A 37 -1 N HIS A 32 O GLU A 109 SHEET 6 B 6 LYS A 42 SER A 45 -1 O PHE A 43 N GLY A 35 SHEET 1 C 6 VAL A 4 THR A 5 0 SHEET 2 C 6 LYS A 11 THR A 16 -1 O TYR A 12 N VAL A 4 SHEET 3 C 6 VAL A 78 ILE A 83 -1 O ARG A 80 N GLU A 13 SHEET 4 C 6 LEU A 104 ASP A 112 -1 O LEU A 104 N ILE A 83 SHEET 5 C 6 THR A 28 LEU A 37 -1 N HIS A 32 O GLU A 109 SHEET 6 C 6 PHE A 53 VAL A 56 -1 O PHE A 53 N VAL A 31 SITE 1 AC1 20 TYR A 33 PHE A 43 ASP A 44 ARG A 49 SITE 2 AC1 20 PHE A 53 MET A 61 VAL A 62 ILE A 63 SITE 3 AC1 20 TRP A 66 GLY A 88 TYR A 89 ILE A 98 SITE 4 AC1 20 PHE A 106 HOH A 224 HOH A 230 HOH A 249 SITE 5 AC1 20 HOH A 256 HOH A 258 HOH A 356 HOH A 363 CRYST1 36.400 32.770 76.990 90.00 90.59 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027473 0.000000 0.000283 0.00000 SCALE2 0.000000 0.030516 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012989 0.00000