PDB Short entry for 3UWY HEADER ISOMERASE 03-DEC-11 3UWY TITLE CRYSTAL STRUCTURE OF TRIOSEPHOSPHATE ISOMERASE FROM METHICILLIN TITLE 2 RESISTANT STAPHYLOCOCCUS AUREUS AT 2.4 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TIM, TRIOSE-PHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 282458; SOURCE 4 STRAIN: MRSA252; SOURCE 5 GENE: SAR0830, TPI, TPIA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15 (PREP4); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS TIM BARREL, ISOMERASE, CYTOSOL EXPDTA X-RAY DIFFRACTION AUTHOR S.MUKHERJEE,A.ROYCHOWDHURY,D.DUTTA,A.K.DAS REVDAT 3 08-NOV-23 3UWY 1 SEQADV REVDAT 2 26-JUN-13 3UWY 1 JRNL REVDAT 1 17-OCT-12 3UWY 0 JRNL AUTH S.MUKHERJEE,A.ROYCHOWDHURY,D.DUTTA,A.K.DAS JRNL TITL CRYSTAL STRUCTURES OF TRIOSEPHOSPHATE ISOMERASE FROM JRNL TITL 2 METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS MRSA252 PROVIDE JRNL TITL 3 STRUCTURAL INSIGHTS INTO NOVEL MODES OF LIGAND BINDING AND JRNL TITL 4 UNIQUE CONFORMATIONS OF CATALYTIC LOOP JRNL REF BIOCHIMIE V. 94 2532 2012 JRNL REFN ISSN 0300-9084 JRNL PMID 22813930 JRNL DOI 10.1016/J.BIOCHI.2012.07.001 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0095 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 21067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1084 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1410 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3894 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.250 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.869 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3966 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5365 ; 1.039 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 516 ; 4.801 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;36.308 ;26.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 703 ;14.382 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;11.960 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 613 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2970 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2547 ; 0.455 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4093 ; 0.942 ; 2.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1419 ; 2.563 ; 5.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1270 ; 4.588 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 10 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 100 2 REMARK 3 1 B 3 B 100 2 REMARK 3 2 A 111 A 119 2 REMARK 3 2 B 111 B 119 2 REMARK 3 3 A 121 A 135 2 REMARK 3 3 B 121 B 135 2 REMARK 3 4 A 139 A 142 2 REMARK 3 4 B 139 B 142 2 REMARK 3 5 A 149 A 169 2 REMARK 3 5 B 149 B 169 2 REMARK 3 6 A 180 A 200 2 REMARK 3 6 B 180 B 200 2 REMARK 3 7 A 205 A 222 2 REMARK 3 7 B 205 B 222 2 REMARK 3 8 A 224 A 226 2 REMARK 3 8 B 224 B 226 2 REMARK 3 9 A 230 A 241 2 REMARK 3 9 B 230 B 241 2 REMARK 3 10 A 249 A 251 2 REMARK 3 10 B 249 B 251 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 815 ; 0.040 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 694 ; 0.040 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 815 ; 0.220 ; 1.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 694 ; 0.360 ; 2.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -7 A 253 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8141 57.8163 26.9348 REMARK 3 T TENSOR REMARK 3 T11: 0.0150 T22: 0.0067 REMARK 3 T33: 0.0230 T12: -0.0032 REMARK 3 T13: 0.0004 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.2718 L22: 1.0839 REMARK 3 L33: 1.6348 L12: 0.3046 REMARK 3 L13: 0.5091 L23: 0.0089 REMARK 3 S TENSOR REMARK 3 S11: 0.0625 S12: 0.0317 S13: -0.0518 REMARK 3 S21: -0.0705 S22: 0.0213 S23: 0.0499 REMARK 3 S31: 0.0378 S32: -0.0354 S33: -0.0838 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 253 REMARK 3 ORIGIN FOR THE GROUP (A): 55.3773 65.1789 51.5052 REMARK 3 T TENSOR REMARK 3 T11: 0.0352 T22: 0.0784 REMARK 3 T33: 0.0568 T12: -0.0192 REMARK 3 T13: -0.0021 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 2.3334 L22: 1.4897 REMARK 3 L33: 1.7433 L12: -0.7795 REMARK 3 L13: 0.1303 L23: 0.3926 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: -0.2666 S13: 0.0106 REMARK 3 S21: 0.1588 S22: 0.1071 S23: -0.1774 REMARK 3 S31: 0.0138 S32: 0.1653 S33: -0.0729 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UWY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21249 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.396 REMARK 200 RESOLUTION RANGE LOW (A) : 70.172 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.55600 REMARK 200 R SYM FOR SHELL (I) : 0.55600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3M9Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M SODIUM MALONATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.35250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.31200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.31200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.02875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.31200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.31200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.67625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.31200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.31200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 131.02875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.31200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.31200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.67625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.35250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 360 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 11 -143.86 51.09 REMARK 500 LYS A 14 145.02 81.02 REMARK 500 THR A 176 -158.19 43.54 REMARK 500 LYS A 178 -160.14 60.55 REMARK 500 SER A 200 -100.86 -140.70 REMARK 500 LYS B 11 -140.67 53.00 REMARK 500 LYS B 14 145.42 80.18 REMARK 500 ALA B 58 61.49 39.77 REMARK 500 SER B 200 -102.78 -137.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UWU RELATED DB: PDB REMARK 900 RELATED ID: 3UWV RELATED DB: PDB REMARK 900 RELATED ID: 3UWW RELATED DB: PDB REMARK 900 RELATED ID: 3UWZ RELATED DB: PDB REMARK 900 RELATED ID: 3M9Y RELATED DB: PDB DBREF 3UWY A 1 253 UNP Q6GIL6 TPIS_STAAR 1 253 DBREF 3UWY B 1 253 UNP Q6GIL6 TPIS_STAAR 1 253 SEQADV 3UWY HIS A -7 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS A -6 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS A -5 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS A -4 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS A -3 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS A -2 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY GLY A -1 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY SER A 0 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS B -7 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS B -6 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS B -5 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS B -4 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS B -3 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY HIS B -2 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY GLY B -1 UNP Q6GIL6 EXPRESSION TAG SEQADV 3UWY SER B 0 UNP Q6GIL6 EXPRESSION TAG SEQRES 1 A 261 HIS HIS HIS HIS HIS HIS GLY SER MET ARG THR PRO ILE SEQRES 2 A 261 ILE ALA GLY ASN TRP LYS MET ASN LYS THR VAL GLN GLU SEQRES 3 A 261 ALA LYS ASP PHE VAL ASN ALA LEU PRO THR LEU PRO ASP SEQRES 4 A 261 SER LYS GLU VAL GLU SER VAL ILE CYS ALA PRO ALA ILE SEQRES 5 A 261 GLN LEU ASP ALA LEU THR THR ALA VAL LYS GLU GLY LYS SEQRES 6 A 261 ALA GLN GLY LEU GLU ILE GLY ALA GLN ASN THR TYR PHE SEQRES 7 A 261 GLU ASP ASN GLY ALA PHE THR GLY GLU THR SER PRO VAL SEQRES 8 A 261 ALA LEU ALA ASP LEU GLY VAL LYS TYR VAL VAL ILE GLY SEQRES 9 A 261 HIS SER GLU ARG ARG GLU LEU PHE HIS GLU THR ASP GLU SEQRES 10 A 261 GLU ILE ASN LYS LYS ALA HIS ALA ILE PHE LYS HIS GLY SEQRES 11 A 261 MET THR PRO ILE ILE CYS VAL GLY GLU THR ASP GLU GLU SEQRES 12 A 261 ARG GLU SER GLY LYS ALA ASN ASP VAL VAL GLY GLU GLN SEQRES 13 A 261 VAL LYS LYS ALA VAL ALA GLY LEU SER GLU ASP GLN LEU SEQRES 14 A 261 LYS SER VAL VAL ILE ALA TYR GLU PRO ILE TRP ALA ILE SEQRES 15 A 261 GLY THR GLY LYS SER SER THR SER GLU ASP ALA ASN GLU SEQRES 16 A 261 MET CYS ALA PHE VAL ARG GLN THR ILE ALA ASP LEU SER SEQRES 17 A 261 SER LYS GLU VAL SER GLU ALA THR ARG ILE GLN TYR GLY SEQRES 18 A 261 GLY SER VAL LYS PRO ASN ASN ILE LYS GLU TYR MET ALA SEQRES 19 A 261 GLN THR ASP ILE ASP GLY ALA LEU VAL GLY GLY ALA SER SEQRES 20 A 261 LEU LYS VAL GLU ASP PHE VAL GLN LEU LEU GLU GLY ALA SEQRES 21 A 261 LYS SEQRES 1 B 261 HIS HIS HIS HIS HIS HIS GLY SER MET ARG THR PRO ILE SEQRES 2 B 261 ILE ALA GLY ASN TRP LYS MET ASN LYS THR VAL GLN GLU SEQRES 3 B 261 ALA LYS ASP PHE VAL ASN ALA LEU PRO THR LEU PRO ASP SEQRES 4 B 261 SER LYS GLU VAL GLU SER VAL ILE CYS ALA PRO ALA ILE SEQRES 5 B 261 GLN LEU ASP ALA LEU THR THR ALA VAL LYS GLU GLY LYS SEQRES 6 B 261 ALA GLN GLY LEU GLU ILE GLY ALA GLN ASN THR TYR PHE SEQRES 7 B 261 GLU ASP ASN GLY ALA PHE THR GLY GLU THR SER PRO VAL SEQRES 8 B 261 ALA LEU ALA ASP LEU GLY VAL LYS TYR VAL VAL ILE GLY SEQRES 9 B 261 HIS SER GLU ARG ARG GLU LEU PHE HIS GLU THR ASP GLU SEQRES 10 B 261 GLU ILE ASN LYS LYS ALA HIS ALA ILE PHE LYS HIS GLY SEQRES 11 B 261 MET THR PRO ILE ILE CYS VAL GLY GLU THR ASP GLU GLU SEQRES 12 B 261 ARG GLU SER GLY LYS ALA ASN ASP VAL VAL GLY GLU GLN SEQRES 13 B 261 VAL LYS LYS ALA VAL ALA GLY LEU SER GLU ASP GLN LEU SEQRES 14 B 261 LYS SER VAL VAL ILE ALA TYR GLU PRO ILE TRP ALA ILE SEQRES 15 B 261 GLY THR GLY LYS SER SER THR SER GLU ASP ALA ASN GLU SEQRES 16 B 261 MET CYS ALA PHE VAL ARG GLN THR ILE ALA ASP LEU SER SEQRES 17 B 261 SER LYS GLU VAL SER GLU ALA THR ARG ILE GLN TYR GLY SEQRES 18 B 261 GLY SER VAL LYS PRO ASN ASN ILE LYS GLU TYR MET ALA SEQRES 19 B 261 GLN THR ASP ILE ASP GLY ALA LEU VAL GLY GLY ALA SER SEQRES 20 B 261 LEU LYS VAL GLU ASP PHE VAL GLN LEU LEU GLU GLY ALA SEQRES 21 B 261 LYS FORMUL 3 HOH *191(H2 O) HELIX 1 1 HIS A -6 GLY A -1 1 6 HELIX 2 2 THR A 15 ALA A 25 1 11 HELIX 3 3 PRO A 42 ILE A 44 5 3 HELIX 4 4 GLN A 45 GLU A 55 1 11 HELIX 5 5 SER A 81 LEU A 88 1 8 HELIX 6 6 HIS A 97 PHE A 104 1 8 HELIX 7 7 THR A 107 HIS A 121 1 15 HELIX 8 8 THR A 132 SER A 138 1 7 HELIX 9 9 LYS A 140 ALA A 154 1 15 HELIX 10 10 SER A 157 VAL A 164 1 8 HELIX 11 11 PRO A 170 ILE A 174 5 5 HELIX 12 12 THR A 181 SER A 200 1 20 HELIX 13 13 SER A 201 GLU A 206 1 6 HELIX 14 14 ASN A 220 ALA A 226 1 7 HELIX 15 15 GLY A 236 LEU A 240 5 5 HELIX 16 16 LYS A 241 LYS A 253 1 13 HELIX 17 17 THR B 15 ALA B 25 1 11 HELIX 18 18 PRO B 42 ILE B 44 5 3 HELIX 19 19 GLN B 45 GLU B 55 1 11 HELIX 20 20 SER B 81 LEU B 88 1 8 HELIX 21 21 HIS B 97 LEU B 103 1 7 HELIX 22 22 THR B 107 HIS B 121 1 15 HELIX 23 23 THR B 132 GLU B 137 1 6 HELIX 24 24 LYS B 140 VAL B 153 1 14 HELIX 25 25 SER B 157 VAL B 164 1 8 HELIX 26 26 PRO B 170 GLY B 175 1 6 HELIX 27 27 THR B 181 SER B 200 1 20 HELIX 28 28 SER B 201 GLU B 206 1 6 HELIX 29 29 ASN B 220 ALA B 226 1 7 HELIX 30 30 GLY B 236 LEU B 240 5 5 HELIX 31 31 LYS B 241 LYS B 253 1 13 SHEET 1 A 9 ILE A 5 ASN A 9 0 SHEET 2 A 9 GLU A 36 ALA A 41 1 O CYS A 40 N GLY A 8 SHEET 3 A 9 LEU A 61 ALA A 65 1 O GLY A 64 N ILE A 39 SHEET 4 A 9 TYR A 92 ILE A 95 1 O VAL A 94 N ALA A 65 SHEET 5 A 9 THR A 124 VAL A 129 1 O CYS A 128 N ILE A 95 SHEET 6 A 9 VAL A 165 TYR A 168 1 O VAL A 165 N ILE A 127 SHEET 7 A 9 ARG A 209 TYR A 212 1 O GLN A 211 N ILE A 166 SHEET 8 A 9 GLY A 232 VAL A 235 1 O GLY A 232 N TYR A 212 SHEET 9 A 9 ILE A 5 ASN A 9 1 N ASN A 9 O VAL A 235 SHEET 1 B 9 ILE B 5 ASN B 9 0 SHEET 2 B 9 GLU B 36 ALA B 41 1 O VAL B 38 N GLY B 8 SHEET 3 B 9 LEU B 61 ALA B 65 1 O GLY B 64 N ILE B 39 SHEET 4 B 9 TYR B 92 ILE B 95 1 O VAL B 94 N ALA B 65 SHEET 5 B 9 THR B 124 VAL B 129 1 O CYS B 128 N ILE B 95 SHEET 6 B 9 VAL B 165 TYR B 168 1 O ALA B 167 N ILE B 127 SHEET 7 B 9 ARG B 209 TYR B 212 1 O GLN B 211 N ILE B 166 SHEET 8 B 9 GLY B 232 VAL B 235 1 O GLY B 232 N TYR B 212 SHEET 9 B 9 ILE B 5 ASN B 9 1 N ASN B 9 O VAL B 235 CISPEP 1 LYS A 178 SER A 179 0 -3.31 CRYST1 76.624 76.624 174.705 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013051 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013051 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005724 0.00000