PDB Short entry for 3VP3 HEADER HYDROLASE/HYDROLASE INHIBITOR 23-FEB-12 3VP3 TITLE CRYSTAL STRUCTURE OF HUMAN GLUTAMINASE IN COMPLEX WITH INHIBITOR 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMINASE KIDNEY ISOFORM, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 221-533; COMPND 5 SYNONYM: GLS, K-GLUTAMINASE, L-GLUTAMINE AMIDOHYDROLASE; COMPND 6 EC: 3.5.1.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GLS, GLS1, KIAA0838; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.THANGAVELU,J.SIVARAMAN REVDAT 2 27-JUN-12 3VP3 1 AUTHOR REVDAT 1 13-JUN-12 3VP3 0 JRNL AUTH K.THANGAVELU,C.Q.PAN,T.KARLBERG,G.BALAJI,M.UTTAMCHANDANI, JRNL AUTH 2 V.SURESH,H.SCHULER,B.C.LOW,J.SIVARAMAN JRNL TITL STRUCTURAL BASIS FOR THE ALLOSTERIC INHIBITORY MECHANISM OF JRNL TITL 2 HUMAN KIDNEY-TYPE GLUTAMINASE (KGA) AND ITS REGULATION BY JRNL TITL 3 RAF-MEK-ERK SIGNALING IN CANCER CELL METABOLISM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 7705 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22538822 JRNL DOI 10.1073/PNAS.1116573109 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 18670 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2075 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2389 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VP3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-MAR-12. REMARK 100 THE RCSB ID CODE IS RCSB095323. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21755 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3CZD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7M LITHIUM SULFATE, 100MM BIS-TRIS- REMARK 280 PROPANE PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 69.91250 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.02150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.51075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 69.91250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 118.53225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 118.53225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 69.91250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.51075 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 69.91250 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.02150 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 69.91250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 79.02150 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 69.91250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 118.53225 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 39.51075 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 69.91250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 39.51075 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 118.53225 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 69.91250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 69.91250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 79.02150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C1 BP8 A 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 317 REMARK 465 PHE A 318 REMARK 465 ASN A 532 REMARK 465 LEU A 533 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C1 BP8 A 601 C32 BP8 A 601 8555 1.53 REMARK 500 C1 BP8 A 601 C30 BP8 A 601 8555 2.04 REMARK 500 N ASN A 375 O3 SO4 A 602 5554 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 248 22.79 -141.14 REMARK 500 HIS A 273 130.51 -177.57 REMARK 500 ASP A 277 64.43 -69.51 REMARK 500 GLN A 285 -130.06 56.73 REMARK 500 LYS A 320 75.69 73.91 REMARK 500 LEU A 321 -165.44 -55.33 REMARK 500 GLU A 325 -8.25 -54.43 REMARK 500 LYS A 346 53.57 39.55 REMARK 500 GLU A 383 31.04 -76.93 REMARK 500 SER A 384 -12.95 -155.68 REMARK 500 THR A 443 -12.32 -140.44 REMARK 500 TYR A 466 -138.32 53.11 REMARK 500 ASP A 467 1.06 -69.28 REMARK 500 PRO A 493 127.84 -39.86 REMARK 500 VAL A 495 -59.48 -128.81 REMARK 500 SER A 502 103.58 -168.71 REMARK 500 PRO A 503 -36.14 -36.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BP8 A 601 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BP8 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VOY RELATED DB: PDB REMARK 900 RELATED ID: 3VPZ RELATED DB: PDB REMARK 900 RELATED ID: 3VP0 RELATED DB: PDB REMARK 900 RELATED ID: 3VP1 RELATED DB: PDB REMARK 900 RELATED ID: 3VP2 RELATED DB: PDB REMARK 900 RELATED ID: 3VP4 RELATED DB: PDB DBREF 3VP3 A 221 533 UNP O94925 GLSK_HUMAN 221 533 SEQADV 3VP3 SER A 219 UNP O94925 EXPRESSION TAG SEQADV 3VP3 MET A 220 UNP O94925 EXPRESSION TAG SEQRES 1 A 315 SER MET ILE PRO ASP PHE MET SER PHE THR SER HIS ILE SEQRES 2 A 315 ASP GLU LEU TYR GLU SER ALA LYS LYS GLN SER GLY GLY SEQRES 3 A 315 LYS VAL ALA ASP TYR ILE PRO GLN LEU ALA LYS PHE SER SEQRES 4 A 315 PRO ASP LEU TRP GLY VAL SER VAL CYS THR VAL ASP GLY SEQRES 5 A 315 GLN ARG HIS SER THR GLY ASP THR LYS VAL PRO PHE CYS SEQRES 6 A 315 LEU GLN SER CYS VAL LYS PRO LEU LYS TYR ALA ILE ALA SEQRES 7 A 315 VAL ASN ASP LEU GLY THR GLU TYR VAL HIS ARG TYR VAL SEQRES 8 A 315 GLY LYS GLU PRO SER GLY LEU ARG PHE ASN LYS LEU PHE SEQRES 9 A 315 LEU ASN GLU ASP ASP LYS PRO HIS ASN PRO MET VAL ASN SEQRES 10 A 315 ALA GLY ALA ILE VAL VAL THR SER LEU ILE LYS GLN GLY SEQRES 11 A 315 VAL ASN ASN ALA GLU LYS PHE ASP TYR VAL MET GLN PHE SEQRES 12 A 315 LEU ASN LYS MET ALA GLY ASN GLU TYR VAL GLY PHE SER SEQRES 13 A 315 ASN ALA THR PHE GLN SER GLU ARG GLU SER GLY ASP ARG SEQRES 14 A 315 ASN PHE ALA ILE GLY TYR TYR LEU LYS GLU LYS LYS CYS SEQRES 15 A 315 PHE PRO GLU GLY THR ASP MET VAL GLY ILE LEU ASP PHE SEQRES 16 A 315 TYR PHE GLN LEU CYS SER ILE GLU VAL THR CYS GLU SER SEQRES 17 A 315 ALA SER VAL MET ALA ALA THR LEU ALA ASN GLY GLY PHE SEQRES 18 A 315 CYS PRO ILE THR GLY GLU ARG VAL LEU SER PRO GLU ALA SEQRES 19 A 315 VAL ARG ASN THR LEU SER LEU MET HIS SER CYS GLY MET SEQRES 20 A 315 TYR ASP PHE SER GLY GLN PHE ALA PHE HIS VAL GLY LEU SEQRES 21 A 315 PRO ALA LYS SER GLY VAL ALA GLY GLY ILE LEU LEU VAL SEQRES 22 A 315 VAL PRO ASN VAL MET GLY MET MET CYS TRP SER PRO PRO SEQRES 23 A 315 LEU ASP LYS MET GLY ASN SER VAL LYS GLY ILE HIS PHE SEQRES 24 A 315 CYS HIS ASP LEU VAL SER LEU CYS ASN PHE HIS ASN TYR SEQRES 25 A 315 ASP ASN LEU HET BP8 A 601 9 HET SO4 A 602 5 HETNAM BP8 5,5'-PENTANE-1,5-DIYLBIS(1,3,4-THIADIAZOL-2-AMINE) HETNAM SO4 SULFATE ION FORMUL 2 BP8 C9 H14 N6 S2 FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *64(H2 O) HELIX 1 1 ASP A 223 LYS A 240 1 18 HELIX 2 2 ILE A 250 LYS A 255 1 6 HELIX 3 3 CYS A 287 HIS A 306 1 20 HELIX 4 4 VAL A 334 SER A 343 1 10 HELIX 5 5 ASN A 350 ALA A 366 1 17 HELIX 6 6 SER A 374 GLU A 383 1 10 HELIX 7 7 GLY A 385 LYS A 398 1 14 HELIX 8 8 ASP A 406 SER A 419 1 14 HELIX 9 9 THR A 423 ASN A 436 1 14 HELIX 10 10 SER A 449 GLY A 464 1 16 HELIX 11 11 MET A 465 ASP A 467 5 3 HELIX 12 12 PHE A 468 VAL A 476 1 9 HELIX 13 13 SER A 511 ASN A 526 1 16 SHEET 1 A 2 LYS A 245 VAL A 246 0 SHEET 2 A 2 PRO A 504 LEU A 505 -1 O LEU A 505 N LYS A 245 SHEET 1 B 5 ARG A 272 GLY A 276 0 SHEET 2 B 5 GLY A 262 THR A 267 -1 N VAL A 265 O HIS A 273 SHEET 3 B 5 MET A 496 TRP A 501 -1 O GLY A 497 N CYS A 266 SHEET 4 B 5 GLY A 487 VAL A 492 -1 N LEU A 490 O MET A 498 SHEET 5 B 5 ALA A 480 SER A 482 -1 N LYS A 481 O LEU A 489 SHEET 1 C 3 PHE A 282 CYS A 283 0 SHEET 2 C 3 ILE A 420 VAL A 422 -1 O VAL A 422 N PHE A 282 SHEET 3 C 3 GLY A 372 PHE A 373 -1 N GLY A 372 O GLU A 421 SITE 1 AC1 5 ASN A 319 LYS A 320 PHE A 322 LEU A 323 SITE 2 AC1 5 TYR A 394 SITE 1 AC2 5 PHE A 373 SER A 374 ASN A 375 ALA A 376 SITE 2 AC2 5 HOH A 753 CRYST1 139.825 139.825 158.043 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007152 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007152 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006327 0.00000