PDB Short entry for 4A09 HEADER DNA-BINDING PROTEIN/DNA 08-SEP-11 4A09 TITLE STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 15 BP CPD-DUPLEX (PURINE AT D-1 TITLE 2 POSITION) AT 3.1 A RESOLUTION (CPD 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA DAMAGE-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DDB P127 SUBUNIT, DNA DAMAGE-BINDING PROTEIN A, DDBA, COMPND 5 DAMAGE-SPECIFIC DNA-BINDING PROTEIN 1, HBV X-ASSOCIATED PROTEIN 1, COMPND 6 XAP-1, UV-DAMAGED DNA-BINDING FACTOR, UV-DAMAGED DNA-BINDING PROTEIN COMPND 7 1, UV-DDB 1, XPE-BINDING FACTOR, XPE-BF, XERODERMA PIGMENTOSUM GROUP COMPND 8 E-COMPLEMENTING PROTEIN, XPCE; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: DNA DAMAGE-BINDING PROTEIN 2; COMPND 13 CHAIN: B; COMPND 14 FRAGMENT: RESIDUES 60-423; COMPND 15 SYNONYM: DAMAGE-SPECIFIC DNA-BINDING PROTEIN 2; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: 5'-D(*GP*GP*TP*GP*AP*AP*AP*(TTD)P*AP*GP*CP*AP*GP*GP)-3'; COMPND 19 CHAIN: G; COMPND 20 ENGINEERED: YES; COMPND 21 OTHER_DETAILS: DAMAGED STRAND. CONTAINS CYCLOBUTANE PYRIMIDINE DIMER COMPND 22 (CPD); COMPND 23 MOL_ID: 4; COMPND 24 MOLECULE: 5'-D(*CP*CP*TP*GP*CP*TP*CP*CP*TP*TP*TP*CP*AP*CP*CP*C)-3'; COMPND 25 CHAIN: H; COMPND 26 ENGINEERED: YES; COMPND 27 OTHER_DETAILS: UNDAMAGED STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC DERIVED; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 13 ORGANISM_COMMON: ZEBRAFISH; SOURCE 14 ORGANISM_TAXID: 7955; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PFASTBAC DERIVED; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 24 ORGANISM_TAXID: 32630; SOURCE 25 MOL_ID: 4; SOURCE 26 SYNTHETIC: YES; SOURCE 27 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 28 ORGANISM_TAXID: 32630 KEYWDS DNA-BINDING PROTEIN-DNA COMPLEX, DNA DAMAGE REPAIR, DDB EXPDTA X-RAY DIFFRACTION AUTHOR A.SCRIMA,E.S.FISCHER,S.IWAI,H.GUT,N.H.THOMA REVDAT 4 20-DEC-23 4A09 1 REMARK HETSYN LINK REVDAT 3 03-APR-19 4A09 1 SOURCE LINK REVDAT 2 07-DEC-11 4A09 1 JRNL REVDAT 1 30-NOV-11 4A09 0 JRNL AUTH A.SCRIMA,E.S.FISCHER,S.IWAI,H.GUT,N.H.THOMA JRNL TITL THE MOLECULAR BASIS OF CRL4(DDB2/CSA) UBIQUITIN LIGASE JRNL TITL 2 ARCHITECTURE, TARGETING, AND ACTIVATION JRNL REF CELL(CAMBRIDGE,MASS.) V. 147 1024 2011 JRNL REFN ISSN 0092-8674 JRNL PMID 22118460 JRNL DOI 10.1016/J.CELL.2011.10.035 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1955 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11485 REMARK 3 NUCLEIC ACID ATOMS : 605 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.90000 REMARK 3 B22 (A**2) : -2.96000 REMARK 3 B33 (A**2) : 4.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.554 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.448 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.208 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.887 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.828 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12399 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16939 ; 0.996 ; 2.022 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1453 ; 5.194 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 534 ;36.784 ;24.551 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2044 ;16.538 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 63 ;15.282 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1933 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9091 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7248 ; 0.262 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11744 ; 0.476 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5151 ; 0.394 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5193 ; 0.772 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4A09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049582. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39092 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3EI1 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, 15 MM NAOH, 21% PEG 200, REMARK 280 PH 5.3 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.82500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.10000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.47000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.10000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.82500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.47000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 194 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 GLU A -9 REMARK 465 ASN A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 PHE A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 ARG A 0 REMARK 465 GLN A 290 REMARK 465 MET A 291 REMARK 465 ASP A 292 REMARK 465 GLY A 293 REMARK 465 THR A 294 REMARK 465 SER A 772 REMARK 465 SER A 773 REMARK 465 SER A 774 REMARK 465 THR A 775 REMARK 465 ALA A 776 REMARK 465 PRO A 777 REMARK 465 HIS A 778 REMARK 465 GLU A 779 REMARK 465 THR A 780 REMARK 465 SER A 781 REMARK 465 PHE A 782 REMARK 465 GLY A 783 REMARK 465 ASN A 1016 REMARK 465 LEU A 1017 REMARK 465 GLY A 1018 REMARK 465 GLU A 1019 REMARK 465 THR A 1020 REMARK 465 SER A 1021 REMARK 465 THR A 1022 REMARK 465 LEU A 1112 REMARK 465 GLN A 1113 REMARK 465 TYR A 1114 REMARK 465 ASP A 1115 REMARK 465 ASP A 1116 REMARK 465 GLY A 1117 REMARK 465 SER A 1118 REMARK 465 GLY A 1119 REMARK 465 MET A 1120 REMARK 465 LYS A 1121 REMARK 465 ARG A 1122 REMARK 465 MET B 76 REMARK 465 HIS B 77 REMARK 465 HIS B 78 REMARK 465 HIS B 79 REMARK 465 HIS B 80 REMARK 465 HIS B 81 REMARK 465 HIS B 82 REMARK 465 ARG B 83 REMARK 465 ARG B 84 REMARK 465 LEU B 85 REMARK 465 VAL B 86 REMARK 465 PRO B 87 REMARK 465 ARG B 88 REMARK 465 GLY B 89 REMARK 465 SER B 90 REMARK 465 GLY B 91 REMARK 465 GLY B 92 REMARK 465 ARG B 93 REMARK 465 THR B 94 REMARK 465 GLY B 95 REMARK 465 GLY B 96 REMARK 465 GLN B 97 REMARK 465 LYS B 98 REMARK 465 LYS B 99 REMARK 465 VAL B 100 REMARK 465 GLY B 101 REMARK 465 ASP B 456 REMARK 465 THR B 457 REMARK 465 DC H 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 198 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 989 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 36 -101.38 56.30 REMARK 500 ASN A 149 47.48 -85.75 REMARK 500 GLN A 186 30.92 -86.24 REMARK 500 LYS A 204 123.21 -37.64 REMARK 500 ASN A 241 83.67 -161.72 REMARK 500 VAL A 264 -67.13 -91.32 REMARK 500 THR A 308 -164.97 -127.75 REMARK 500 LEU A 317 -77.38 -105.75 REMARK 500 ASN A 341 -162.88 -77.53 REMARK 500 LEU A 367 -124.10 60.35 REMARK 500 ARG A 369 -165.10 -116.00 REMARK 500 PHE A 382 -134.89 52.60 REMARK 500 ILE A 407 99.39 25.28 REMARK 500 PRO A 417 -109.65 -65.25 REMARK 500 GLU A 420 -167.57 63.20 REMARK 500 THR A 421 -176.45 59.26 REMARK 500 ASP A 423 -1.57 -149.29 REMARK 500 PHE A 429 -150.27 -122.11 REMARK 500 GLN A 481 -71.65 73.89 REMARK 500 LYS A 484 71.41 51.95 REMARK 500 ASN A 504 -152.51 -120.98 REMARK 500 GLN A 524 7.30 57.18 REMARK 500 ILE A 564 89.33 58.05 REMARK 500 GLU A 597 -103.73 57.23 REMARK 500 ASP A 625 72.82 62.91 REMARK 500 LEU A 631 -124.57 -112.22 REMARK 500 SER A 643 -107.76 -89.47 REMARK 500 SER A 645 -21.41 -149.81 REMARK 500 ASN A 663 -127.15 62.36 REMARK 500 ASN A 683 65.07 -110.19 REMARK 500 PRO A 688 -93.23 -36.49 REMARK 500 ASP A 689 58.86 -110.62 REMARK 500 SER A 697 -6.22 -140.30 REMARK 500 ARG A 722 -31.42 -132.87 REMARK 500 HIS A 797 -67.77 -99.53 REMARK 500 ASP A 855 78.35 43.66 REMARK 500 ASN A 885 -110.69 50.74 REMARK 500 GLU A 902 -62.77 -105.65 REMARK 500 MET A 910 94.78 -164.78 REMARK 500 MET A 927 -7.63 -150.08 REMARK 500 SER A 929 -139.62 56.03 REMARK 500 ILE A 945 -71.74 -74.29 REMARK 500 PRO A 951 90.09 -69.65 REMARK 500 SER A1027 110.85 -160.54 REMARK 500 PHE A1076 107.04 -56.44 REMARK 500 THR B 103 -27.34 78.87 REMARK 500 GLN B 116 86.56 -65.74 REMARK 500 ILE B 118 65.72 24.42 REMARK 500 ASN B 181 -160.85 -79.85 REMARK 500 ASP B 193 91.53 -56.00 REMARK 500 REMARK 500 THIS ENTRY HAS 62 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1456 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2B5L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF DDB1 IN COMPLEX WITH SIMIAN VIRUS 5 VPROTEIN REMARK 900 RELATED ID: 2B5M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF DDB1 REMARK 900 RELATED ID: 2HYE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE DDB1-CUL4A-RBX1-SV5V COMPLEX REMARK 900 RELATED ID: 2B5N RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE DDB1 BPB DOMAIN REMARK 900 RELATED ID: 4A0A RELATED DB: PDB REMARK 900 STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 16 BP CPD- DUPLEX (PYRIMIDINE REMARK 900 AT D-1 POSITION) AT 3.6 A RESOLUTION (CPD 3) REMARK 900 RELATED ID: 4A0B RELATED DB: PDB REMARK 900 STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 16 BP CPD- DUPLEX (PYRIMIDINE REMARK 900 AT D-1 POSITION) AT 3.8 A RESOLUTION (CPD 4) REMARK 900 RELATED ID: 4A08 RELATED DB: PDB REMARK 900 STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 13 BP CPD- DUPLEX (PURINE AT REMARK 900 D-1 POSITION) AT 3.0 A RESOLUTION (CPD 1) REMARK 900 RELATED ID: 4A0C RELATED DB: PDB REMARK 900 STRUCTURE OF THE CAND1-CUL4B-RBX1 COMPLEX REMARK 900 RELATED ID: 3EI1 RELATED DB: PDB REMARK 900 RELATED ID: 3EI2 RELATED DB: PDB REMARK 900 RELATED ID: 3EI3 RELATED DB: PDB REMARK 900 RELATED ID: 3EI4 RELATED DB: PDB REMARK 900 RELATED ID: 4A0L RELATED DB: PDB REMARK 900 RELATED ID: 4A11 RELATED DB: PDB REMARK 900 RELATED ID: 4A0K RELATED DB: PDB REMARK 900 STRUCTURE OF DDB1-DDB2-CUL4A-RBX1 BOUND TO A 12 BP ABASIC SITE REMARK 900 CONTAINING DNA-DUPLEX DBREF 4A09 A 1 1140 UNP Q16531 DDB1_HUMAN 1 1140 DBREF 4A09 B 94 457 UNP Q2YDS1 DDB2_DANRE 60 423 DBREF 4A09 G 1 15 PDB 4A09 4A09 1 15 DBREF 4A09 H 1 16 PDB 4A09 4A09 1 16 SEQADV 4A09 MET A -18 UNP Q16531 EXPRESSION TAG SEQADV 4A09 HIS A -17 UNP Q16531 EXPRESSION TAG SEQADV 4A09 HIS A -16 UNP Q16531 EXPRESSION TAG SEQADV 4A09 HIS A -15 UNP Q16531 EXPRESSION TAG SEQADV 4A09 HIS A -14 UNP Q16531 EXPRESSION TAG SEQADV 4A09 HIS A -13 UNP Q16531 EXPRESSION TAG SEQADV 4A09 HIS A -12 UNP Q16531 EXPRESSION TAG SEQADV 4A09 VAL A -11 UNP Q16531 EXPRESSION TAG SEQADV 4A09 ASP A -10 UNP Q16531 EXPRESSION TAG SEQADV 4A09 GLU A -9 UNP Q16531 EXPRESSION TAG SEQADV 4A09 ASN A -8 UNP Q16531 EXPRESSION TAG SEQADV 4A09 LEU A -7 UNP Q16531 EXPRESSION TAG SEQADV 4A09 TYR A -6 UNP Q16531 EXPRESSION TAG SEQADV 4A09 PHE A -5 UNP Q16531 EXPRESSION TAG SEQADV 4A09 GLN A -4 UNP Q16531 EXPRESSION TAG SEQADV 4A09 GLY A -3 UNP Q16531 EXPRESSION TAG SEQADV 4A09 GLY A -2 UNP Q16531 EXPRESSION TAG SEQADV 4A09 GLY A -1 UNP Q16531 EXPRESSION TAG SEQADV 4A09 ARG A 0 UNP Q16531 EXPRESSION TAG SEQADV 4A09 ALA A 194 UNP Q16531 GLU 194 ENGINEERED MUTATION SEQADV 4A09 MET B 76 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 HIS B 77 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 HIS B 78 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 HIS B 79 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 HIS B 80 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 HIS B 81 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 HIS B 82 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 ARG B 83 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 ARG B 84 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 LEU B 85 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 VAL B 86 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 PRO B 87 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 ARG B 88 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 GLY B 89 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 SER B 90 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 GLY B 91 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 GLY B 92 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 ARG B 93 UNP Q2YDS1 EXPRESSION TAG SEQADV 4A09 GLN B 180 UNP Q2YDS1 LEU 146 VARIANT SEQADV 4A09 ARG B 214 UNP Q2YDS1 TRP 180 VARIANT SEQRES 1 A 1159 MET HIS HIS HIS HIS HIS HIS VAL ASP GLU ASN LEU TYR SEQRES 2 A 1159 PHE GLN GLY GLY GLY ARG MET SER TYR ASN TYR VAL VAL SEQRES 3 A 1159 THR ALA GLN LYS PRO THR ALA VAL ASN GLY CYS VAL THR SEQRES 4 A 1159 GLY HIS PHE THR SER ALA GLU ASP LEU ASN LEU LEU ILE SEQRES 5 A 1159 ALA LYS ASN THR ARG LEU GLU ILE TYR VAL VAL THR ALA SEQRES 6 A 1159 GLU GLY LEU ARG PRO VAL LYS GLU VAL GLY MET TYR GLY SEQRES 7 A 1159 LYS ILE ALA VAL MET GLU LEU PHE ARG PRO LYS GLY GLU SEQRES 8 A 1159 SER LYS ASP LEU LEU PHE ILE LEU THR ALA LYS TYR ASN SEQRES 9 A 1159 ALA CYS ILE LEU GLU TYR LYS GLN SER GLY GLU SER ILE SEQRES 10 A 1159 ASP ILE ILE THR ARG ALA HIS GLY ASN VAL GLN ASP ARG SEQRES 11 A 1159 ILE GLY ARG PRO SER GLU THR GLY ILE ILE GLY ILE ILE SEQRES 12 A 1159 ASP PRO GLU CYS ARG MET ILE GLY LEU ARG LEU TYR ASP SEQRES 13 A 1159 GLY LEU PHE LYS VAL ILE PRO LEU ASP ARG ASP ASN LYS SEQRES 14 A 1159 GLU LEU LYS ALA PHE ASN ILE ARG LEU GLU GLU LEU HIS SEQRES 15 A 1159 VAL ILE ASP VAL LYS PHE LEU TYR GLY CYS GLN ALA PRO SEQRES 16 A 1159 THR ILE CYS PHE VAL TYR GLN ASP PRO GLN GLY ARG HIS SEQRES 17 A 1159 VAL LYS THR TYR ALA VAL SER LEU ARG GLU LYS GLU PHE SEQRES 18 A 1159 ASN LYS GLY PRO TRP LYS GLN GLU ASN VAL GLU ALA GLU SEQRES 19 A 1159 ALA SER MET VAL ILE ALA VAL PRO GLU PRO PHE GLY GLY SEQRES 20 A 1159 ALA ILE ILE ILE GLY GLN GLU SER ILE THR TYR HIS ASN SEQRES 21 A 1159 GLY ASP LYS TYR LEU ALA ILE ALA PRO PRO ILE ILE LYS SEQRES 22 A 1159 GLN SER THR ILE VAL CYS HIS ASN ARG VAL ASP PRO ASN SEQRES 23 A 1159 GLY SER ARG TYR LEU LEU GLY ASP MET GLU GLY ARG LEU SEQRES 24 A 1159 PHE MET LEU LEU LEU GLU LYS GLU GLU GLN MET ASP GLY SEQRES 25 A 1159 THR VAL THR LEU LYS ASP LEU ARG VAL GLU LEU LEU GLY SEQRES 26 A 1159 GLU THR SER ILE ALA GLU CYS LEU THR TYR LEU ASP ASN SEQRES 27 A 1159 GLY VAL VAL PHE VAL GLY SER ARG LEU GLY ASP SER GLN SEQRES 28 A 1159 LEU VAL LYS LEU ASN VAL ASP SER ASN GLU GLN GLY SER SEQRES 29 A 1159 TYR VAL VAL ALA MET GLU THR PHE THR ASN LEU GLY PRO SEQRES 30 A 1159 ILE VAL ASP MET CYS VAL VAL ASP LEU GLU ARG GLN GLY SEQRES 31 A 1159 GLN GLY GLN LEU VAL THR CYS SER GLY ALA PHE LYS GLU SEQRES 32 A 1159 GLY SER LEU ARG ILE ILE ARG ASN GLY ILE GLY ILE HIS SEQRES 33 A 1159 GLU HIS ALA SER ILE ASP LEU PRO GLY ILE LYS GLY LEU SEQRES 34 A 1159 TRP PRO LEU ARG SER ASP PRO ASN ARG GLU THR ASP ASP SEQRES 35 A 1159 THR LEU VAL LEU SER PHE VAL GLY GLN THR ARG VAL LEU SEQRES 36 A 1159 MET LEU ASN GLY GLU GLU VAL GLU GLU THR GLU LEU MET SEQRES 37 A 1159 GLY PHE VAL ASP ASP GLN GLN THR PHE PHE CYS GLY ASN SEQRES 38 A 1159 VAL ALA HIS GLN GLN LEU ILE GLN ILE THR SER ALA SER SEQRES 39 A 1159 VAL ARG LEU VAL SER GLN GLU PRO LYS ALA LEU VAL SER SEQRES 40 A 1159 GLU TRP LYS GLU PRO GLN ALA LYS ASN ILE SER VAL ALA SEQRES 41 A 1159 SER CYS ASN SER SER GLN VAL VAL VAL ALA VAL GLY ARG SEQRES 42 A 1159 ALA LEU TYR TYR LEU GLN ILE HIS PRO GLN GLU LEU ARG SEQRES 43 A 1159 GLN ILE SER HIS THR GLU MET GLU HIS GLU VAL ALA CYS SEQRES 44 A 1159 LEU ASP ILE THR PRO LEU GLY ASP SER ASN GLY LEU SER SEQRES 45 A 1159 PRO LEU CYS ALA ILE GLY LEU TRP THR ASP ILE SER ALA SEQRES 46 A 1159 ARG ILE LEU LYS LEU PRO SER PHE GLU LEU LEU HIS LYS SEQRES 47 A 1159 GLU MET LEU GLY GLY GLU ILE ILE PRO ARG SER ILE LEU SEQRES 48 A 1159 MET THR THR PHE GLU SER SER HIS TYR LEU LEU CYS ALA SEQRES 49 A 1159 LEU GLY ASP GLY ALA LEU PHE TYR PHE GLY LEU ASN ILE SEQRES 50 A 1159 GLU THR GLY LEU LEU SER ASP ARG LYS LYS VAL THR LEU SEQRES 51 A 1159 GLY THR GLN PRO THR VAL LEU ARG THR PHE ARG SER LEU SEQRES 52 A 1159 SER THR THR ASN VAL PHE ALA CYS SER ASP ARG PRO THR SEQRES 53 A 1159 VAL ILE TYR SER SER ASN HIS LYS LEU VAL PHE SER ASN SEQRES 54 A 1159 VAL ASN LEU LYS GLU VAL ASN TYR MET CYS PRO LEU ASN SEQRES 55 A 1159 SER ASP GLY TYR PRO ASP SER LEU ALA LEU ALA ASN ASN SEQRES 56 A 1159 SER THR LEU THR ILE GLY THR ILE ASP GLU ILE GLN LYS SEQRES 57 A 1159 LEU HIS ILE ARG THR VAL PRO LEU TYR GLU SER PRO ARG SEQRES 58 A 1159 LYS ILE CYS TYR GLN GLU VAL SER GLN CYS PHE GLY VAL SEQRES 59 A 1159 LEU SER SER ARG ILE GLU VAL GLN ASP THR SER GLY GLY SEQRES 60 A 1159 THR THR ALA LEU ARG PRO SER ALA SER THR GLN ALA LEU SEQRES 61 A 1159 SER SER SER VAL SER SER SER LYS LEU PHE SER SER SER SEQRES 62 A 1159 THR ALA PRO HIS GLU THR SER PHE GLY GLU GLU VAL GLU SEQRES 63 A 1159 VAL HIS ASN LEU LEU ILE ILE ASP GLN HIS THR PHE GLU SEQRES 64 A 1159 VAL LEU HIS ALA HIS GLN PHE LEU GLN ASN GLU TYR ALA SEQRES 65 A 1159 LEU SER LEU VAL SER CYS LYS LEU GLY LYS ASP PRO ASN SEQRES 66 A 1159 THR TYR PHE ILE VAL GLY THR ALA MET VAL TYR PRO GLU SEQRES 67 A 1159 GLU ALA GLU PRO LYS GLN GLY ARG ILE VAL VAL PHE GLN SEQRES 68 A 1159 TYR SER ASP GLY LYS LEU GLN THR VAL ALA GLU LYS GLU SEQRES 69 A 1159 VAL LYS GLY ALA VAL TYR SER MET VAL GLU PHE ASN GLY SEQRES 70 A 1159 LYS LEU LEU ALA SER ILE ASN SER THR VAL ARG LEU TYR SEQRES 71 A 1159 GLU TRP THR THR GLU LYS GLU LEU ARG THR GLU CYS ASN SEQRES 72 A 1159 HIS TYR ASN ASN ILE MET ALA LEU TYR LEU LYS THR LYS SEQRES 73 A 1159 GLY ASP PHE ILE LEU VAL GLY ASP LEU MET ARG SER VAL SEQRES 74 A 1159 LEU LEU LEU ALA TYR LYS PRO MET GLU GLY ASN PHE GLU SEQRES 75 A 1159 GLU ILE ALA ARG ASP PHE ASN PRO ASN TRP MET SER ALA SEQRES 76 A 1159 VAL GLU ILE LEU ASP ASP ASP ASN PHE LEU GLY ALA GLU SEQRES 77 A 1159 ASN ALA PHE ASN LEU PHE VAL CYS GLN LYS ASP SER ALA SEQRES 78 A 1159 ALA THR THR ASP GLU GLU ARG GLN HIS LEU GLN GLU VAL SEQRES 79 A 1159 GLY LEU PHE HIS LEU GLY GLU PHE VAL ASN VAL PHE CYS SEQRES 80 A 1159 HIS GLY SER LEU VAL MET GLN ASN LEU GLY GLU THR SER SEQRES 81 A 1159 THR PRO THR GLN GLY SER VAL LEU PHE GLY THR VAL ASN SEQRES 82 A 1159 GLY MET ILE GLY LEU VAL THR SER LEU SER GLU SER TRP SEQRES 83 A 1159 TYR ASN LEU LEU LEU ASP MET GLN ASN ARG LEU ASN LYS SEQRES 84 A 1159 VAL ILE LYS SER VAL GLY LYS ILE GLU HIS SER PHE TRP SEQRES 85 A 1159 ARG SER PHE HIS THR GLU ARG LYS THR GLU PRO ALA THR SEQRES 86 A 1159 GLY PHE ILE ASP GLY ASP LEU ILE GLU SER PHE LEU ASP SEQRES 87 A 1159 ILE SER ARG PRO LYS MET GLN GLU VAL VAL ALA ASN LEU SEQRES 88 A 1159 GLN TYR ASP ASP GLY SER GLY MET LYS ARG GLU ALA THR SEQRES 89 A 1159 ALA ASP ASP LEU ILE LYS VAL VAL GLU GLU LEU THR ARG SEQRES 90 A 1159 ILE HIS SEQRES 1 B 382 MET HIS HIS HIS HIS HIS HIS ARG ARG LEU VAL PRO ARG SEQRES 2 B 382 GLY SER GLY GLY ARG THR GLY GLY GLN LYS LYS VAL GLY SEQRES 3 B 382 GLN THR SER ILE LEU HIS TYR ILE TYR LYS SER SER LEU SEQRES 4 B 382 GLY GLN SER ILE HIS ALA GLN LEU ARG GLN CYS LEU GLN SEQRES 5 B 382 GLU PRO PHE ILE ARG SER LEU LYS SER TYR LYS LEU HIS SEQRES 6 B 382 ARG THR ALA SER PRO PHE ASP ARG ARG VAL THR SER LEU SEQRES 7 B 382 GLU TRP HIS PRO THR HIS PRO THR THR VAL ALA VAL GLY SEQRES 8 B 382 SER LYS GLY GLY ASP ILE ILE LEU TRP ASP TYR ASP VAL SEQRES 9 B 382 GLN ASN LYS THR SER PHE ILE GLN GLY MET GLY PRO GLY SEQRES 10 B 382 ASP ALA ILE THR GLY MET LYS PHE ASN GLN PHE ASN THR SEQRES 11 B 382 ASN GLN LEU PHE VAL SER SER ILE ARG GLY ALA THR THR SEQRES 12 B 382 LEU ARG ASP PHE SER GLY SER VAL ILE GLN VAL PHE ALA SEQRES 13 B 382 LYS THR ASP SER TRP ASP TYR TRP TYR CYS CYS VAL ASP SEQRES 14 B 382 VAL SER VAL SER ARG GLN MET LEU ALA THR GLY ASP SER SEQRES 15 B 382 THR GLY ARG LEU LEU LEU LEU GLY LEU ASP GLY HIS GLU SEQRES 16 B 382 ILE PHE LYS GLU LYS LEU HIS LYS ALA LYS VAL THR HIS SEQRES 17 B 382 ALA GLU PHE ASN PRO ARG CYS ASP TRP LEU MET ALA THR SEQRES 18 B 382 SER SER VAL ASP ALA THR VAL LYS LEU TRP ASP LEU ARG SEQRES 19 B 382 ASN ILE LYS ASP LYS ASN SER TYR ILE ALA GLU MET PRO SEQRES 20 B 382 HIS GLU LYS PRO VAL ASN ALA ALA TYR PHE ASN PRO THR SEQRES 21 B 382 ASP SER THR LYS LEU LEU THR THR ASP GLN ARG ASN GLU SEQRES 22 B 382 ILE ARG VAL TYR SER SER TYR ASP TRP SER LYS PRO ASP SEQRES 23 B 382 GLN ILE ILE ILE HIS PRO HIS ARG GLN PHE GLN HIS LEU SEQRES 24 B 382 THR PRO ILE LYS ALA THR TRP HIS PRO MET TYR ASP LEU SEQRES 25 B 382 ILE VAL ALA GLY ARG TYR PRO ASP ASP GLN LEU LEU LEU SEQRES 26 B 382 ASN ASP LYS ARG THR ILE ASP ILE TYR ASP ALA ASN SER SEQRES 27 B 382 GLY GLY LEU VAL HIS GLN LEU ARG ASP PRO ASN ALA ALA SEQRES 28 B 382 GLY ILE ILE SER LEU ASN LYS PHE SER PRO THR GLY ASP SEQRES 29 B 382 VAL LEU ALA SER GLY MET GLY PHE ASN ILE LEU ILE TRP SEQRES 30 B 382 ASN ARG GLU ASP THR SEQRES 1 G 14 DG DG DT DG DA DA DA TTD DA DG DC DA DG SEQRES 2 G 14 DG SEQRES 1 H 16 DC DC DT DG DC DT DC DC DT DT DT DC DA SEQRES 2 H 16 DC DC DC MODRES 4A09 TTD G 8 DT CIS-SYN CYCLOBUTANE THYMINE DIMER HET TTD G 8 40 HET CA B1456 1 HETNAM TTD CIS-SYN CYCLOBUTANE THYMINE DIMER HETNAM CA CALCIUM ION HETSYN TTD [(3S,4S,9S,10R,12R,15AR,18BS,18CS)-3,7-DIHYDROXY-15A, HETSYN 2 TTD 15B-DIMETHYL-7-OXIDO-13,15,16,18- HETSYN 3 TTD TETRAOXOHEXADECAHYDRO-1H-1,4-EPOX Y-9,12-METHANO-6,8, HETSYN 4 TTD 11-TRIOXA-12A,14,17,18A-TETRAAZA-7- HETSYN 5 TTD PHOSPHACYCLOHEXADECA[1,2,3,4-DEF]BIPHENYLEN-10- HETSYN 6 TTD YL]METHYL DIHYDROGEN PHOSPHATE FORMUL 3 TTD C20 H28 N4 O15 P2 FORMUL 5 CA CA 2+ FORMUL 6 HOH *22(H2 O) HELIX 1 1 ILE A 252 SER A 256 5 5 HELIX 2 2 ALA A 381 GLU A 384 5 4 HELIX 3 3 THR A 985 GLN A 990 1 6 HELIX 4 4 SER A 1044 ILE A 1062 1 19 HELIX 5 5 GLU A 1069 ARG A 1074 1 6 HELIX 6 6 GLY A 1091 SER A 1096 1 6 HELIX 7 7 PHE A 1097 ILE A 1100 5 4 HELIX 8 8 SER A 1101 VAL A 1109 1 9 HELIX 9 9 THR A 1125 THR A 1137 1 13 HELIX 10 10 SER B 104 LEU B 114 1 11 HELIX 11 11 ILE B 118 LEU B 134 1 17 HELIX 12 12 LYS B 135 TYR B 137 5 3 SHEET 1 AA 5 VAL A1004 HIS A1009 0 SHEET 2 AA 5 VAL A1028 THR A1032 -1 O LEU A1029 N CYS A1008 SHEET 3 AA 5 ILE A1037 SER A1042 -1 O GLY A1038 N PHE A1030 SHEET 4 AA 5 ASN A 4 GLN A 10 -1 O TYR A 5 N THR A1041 SHEET 5 AA 5 PHE A1088 ASP A1090 1 O ILE A1089 N VAL A 6 SHEET 1 AB 4 GLY A 17 GLY A 21 0 SHEET 2 AB 4 ASN A 30 LYS A 35 -1 O ASN A 30 N GLY A 21 SHEET 3 AB 4 ARG A 38 THR A 45 -1 O ARG A 38 N LYS A 35 SHEET 4 AB 4 GLY A 48 GLY A 56 -1 O GLY A 48 N THR A 45 SHEET 1 AC 4 ILE A 61 PHE A 67 0 SHEET 2 AC 4 LEU A 76 THR A 81 -1 O LEU A 76 N PHE A 67 SHEET 3 AC 4 ASN A 85 SER A 94 -1 O ASN A 85 N THR A 81 SHEET 4 AC 4 SER A 97 ASN A 107 -1 O SER A 97 N SER A 94 SHEET 1 AD 4 ILE A 121 ILE A 124 0 SHEET 2 AD 4 MET A 130 ARG A 134 -1 O GLY A 132 N ILE A 123 SHEET 3 AD 4 LEU A 139 PRO A 144 -1 O LYS A 141 N LEU A 133 SHEET 4 AD 4 PHE A 155 ARG A 158 -1 O PHE A 155 N VAL A 142 SHEET 1 AE 4 HIS A 163 PHE A 169 0 SHEET 2 AE 4 THR A 177 ASP A 184 -1 O CYS A 179 N LYS A 168 SHEET 3 AE 4 GLY A 187 SER A 196 -1 O GLY A 187 N ASP A 184 SHEET 4 AE 4 GLU A 201 LYS A 204 1 O GLU A 201 N SER A 196 SHEET 1 AF 4 HIS A 163 PHE A 169 0 SHEET 2 AF 4 THR A 177 ASP A 184 -1 O CYS A 179 N LYS A 168 SHEET 3 AF 4 GLY A 187 SER A 196 -1 O GLY A 187 N ASP A 184 SHEET 4 AF 4 GLU A 210 ASN A 211 -1 O GLU A 210 N VAL A 190 SHEET 1 AG 2 GLU A 201 LYS A 204 0 SHEET 2 AG 2 GLY A 187 SER A 196 1 O ALA A 194 N ASN A 203 SHEET 1 AH 4 MET A 218 ALA A 221 0 SHEET 2 AH 4 ALA A 229 ILE A 232 -1 O ILE A 230 N ILE A 220 SHEET 3 AH 4 ILE A 237 ASN A 241 -1 O THR A 238 N ILE A 231 SHEET 4 AH 4 LYS A 244 ILE A 248 -1 O LYS A 244 N ASN A 241 SHEET 1 AI 4 ILE A 258 ARG A 263 0 SHEET 2 AI 4 ARG A 270 ASP A 275 -1 O LEU A 272 N ASN A 262 SHEET 3 AI 4 ARG A 279 GLU A 288 -1 O ARG A 279 N ASP A 275 SHEET 4 AI 4 THR A 296 GLU A 307 -1 N THR A 296 O GLU A 288 SHEET 1 AJ 4 ALA A 311 ASP A 318 0 SHEET 2 AJ 4 VAL A 321 SER A 326 -1 O VAL A 321 N LEU A 317 SHEET 3 AJ 4 SER A 331 LEU A 336 -1 O GLN A 332 N VAL A 324 SHEET 4 AJ 4 VAL A 347 PHE A 353 -1 O VAL A 348 N LYS A 335 SHEET 1 AK 4 ILE A 359 VAL A 365 0 SHEET 2 AK 4 GLN A 374 SER A 379 -1 O GLN A 374 N VAL A 365 SHEET 3 AK 4 SER A 386 ASN A 392 -1 O SER A 386 N SER A 379 SHEET 4 AK 4 LEU A 710 PRO A 716 -1 O HIS A 711 N ARG A 391 SHEET 1 AL 4 ILE A 396 ILE A 402 0 SHEET 2 AL 4 LEU A 699 ILE A 704 -1 O LEU A 699 N ILE A 402 SHEET 3 AL 4 SER A 690 ALA A 694 -1 O LEU A 691 N GLY A 702 SHEET 4 AL 4 TYR A 678 LEU A 682 -1 O TYR A 678 N ALA A 694 SHEET 1 AM 4 LEU A 410 LEU A 413 0 SHEET 2 AM 4 THR A 424 SER A 428 -1 O THR A 424 N LEU A 413 SHEET 3 AM 4 THR A 433 ASN A 439 -1 O ARG A 434 N LEU A 427 SHEET 4 AM 4 GLU A 442 GLU A 445 -1 O GLU A 442 N ASN A 439 SHEET 1 AN 4 THR A 457 VAL A 463 0 SHEET 2 AN 4 GLN A 467 THR A 472 -1 O GLN A 467 N VAL A 463 SHEET 3 AN 4 SER A 475 VAL A 479 -1 O SER A 475 N THR A 472 SHEET 4 AN 4 LEU A 486 LYS A 491 -1 N VAL A 487 O LEU A 478 SHEET 1 AO 4 VAL A 500 CYS A 503 0 SHEET 2 AO 4 GLN A 507 VAL A 512 -1 O VAL A 509 N SER A 502 SHEET 3 AO 4 ALA A 515 HIS A 522 -1 O ALA A 515 N VAL A 512 SHEET 4 AO 4 GLU A 525 GLU A 533 -1 O GLU A 525 N HIS A 522 SHEET 1 AP 4 VAL A 538 ASP A 542 0 SHEET 2 AP 4 LEU A 555 LEU A 560 -1 O ALA A 557 N ASP A 542 SHEET 3 AP 4 ALA A 566 LYS A 570 -1 O ARG A 567 N ILE A 558 SHEET 4 AP 4 LEU A 576 HIS A 578 -1 N LEU A 577 O ILE A 568 SHEET 1 AQ 4 PRO A 588 PHE A 596 0 SHEET 2 AQ 4 SER A 599 LEU A 606 -1 O SER A 599 N PHE A 596 SHEET 3 AQ 4 ALA A 610 LEU A 616 -1 O ALA A 610 N LEU A 606 SHEET 4 AQ 4 LEU A 623 THR A 630 -1 O SER A 624 N GLY A 615 SHEET 1 AR 4 VAL A 637 ARG A 642 0 SHEET 2 AR 4 THR A 647 CYS A 652 -1 O ASN A 648 N PHE A 641 SHEET 3 AR 4 THR A 657 SER A 662 -1 O THR A 657 N ALA A 651 SHEET 4 AR 4 LYS A 665 ASN A 670 -1 O LYS A 665 N SER A 662 SHEET 1 AS 2 SER A 720 GLN A 727 0 SHEET 2 AS 2 CYS A 732 GLN A 743 -1 O CYS A 732 N GLN A 727 SHEET 1 AT 2 THR A 749 ALA A 751 0 SHEET 2 AT 2 CYS A 732 GLN A 743 1 O VAL A 742 N THR A 750 SHEET 1 AU 5 SER A 762 VAL A 765 0 SHEET 2 AU 5 VAL A 801 GLN A 806 1 O LEU A 802 N SER A 762 SHEET 3 AU 5 VAL A 786 ASP A 795 -1 O LEU A 791 N HIS A 805 SHEET 4 AU 5 CYS A 732 GLN A 743 -1 O PHE A 733 N ILE A 794 SHEET 5 AU 5 THR A 749 ALA A 751 1 O THR A 750 N VAL A 742 SHEET 1 AV 5 SER A 762 VAL A 765 0 SHEET 2 AV 5 VAL A 801 GLN A 806 1 O LEU A 802 N SER A 762 SHEET 3 AV 5 VAL A 786 ASP A 795 -1 O LEU A 791 N HIS A 805 SHEET 4 AV 5 CYS A 732 GLN A 743 -1 O PHE A 733 N ILE A 794 SHEET 5 AV 5 SER A 720 GLN A 727 -1 O SER A 720 N SER A 738 SHEET 1 AW 4 GLU A 811 CYS A 819 0 SHEET 2 AW 4 TYR A 828 MET A 835 -1 O TYR A 828 N CYS A 819 SHEET 3 AW 4 GLY A 846 SER A 854 -1 O ARG A 847 N THR A 833 SHEET 4 AW 4 LYS A 857 VAL A 866 -1 O LYS A 857 N SER A 854 SHEET 1 AX 4 VAL A 870 PHE A 876 0 SHEET 2 AX 4 LYS A 879 ILE A 884 -1 O LYS A 879 N PHE A 876 SHEET 3 AX 4 THR A 887 TRP A 893 -1 O THR A 887 N ILE A 884 SHEET 4 AX 4 LEU A 899 HIS A 905 -1 O ARG A 900 N GLU A 892 SHEET 1 AY 4 ALA A 911 LYS A 917 0 SHEET 2 AY 4 PHE A 920 ASP A 925 -1 O PHE A 920 N LYS A 917 SHEET 3 AY 4 VAL A 930 LYS A 936 -1 O LEU A 931 N VAL A 923 SHEET 4 AY 4 ASN A 941 ARG A 947 -1 O ASN A 941 N LYS A 936 SHEET 1 AZ 4 MET A 954 ASP A 961 0 SHEET 2 AZ 4 ASN A 964 GLU A 969 -1 O ASN A 964 N LEU A 960 SHEET 3 AZ 4 ASN A 973 LYS A 979 -1 O ASN A 973 N GLU A 969 SHEET 4 AZ 4 LEU A 992 HIS A 999 -1 O GLN A 993 N GLN A 978 SHEET 1 A0 2 PHE A1076 HIS A1077 0 SHEET 2 A0 2 THR A1082 GLU A1083 -1 O GLU A1083 N PHE A1076 SHEET 1 BA 4 LYS B 138 ALA B 143 0 SHEET 2 BA 4 ASN B 448 ASN B 453 -1 O ILE B 449 N ALA B 143 SHEET 3 BA 4 LEU B 441 MET B 445 -1 O LEU B 441 N TRP B 452 SHEET 4 BA 4 LEU B 431 PHE B 434 -1 O LEU B 431 N GLY B 444 SHEET 1 BB 4 VAL B 150 TRP B 155 0 SHEET 2 BB 4 THR B 162 SER B 167 -1 O ALA B 164 N GLU B 154 SHEET 3 BB 4 ILE B 172 ASP B 176 -1 O ILE B 173 N VAL B 165 SHEET 4 BB 4 SER B 184 ILE B 186 -1 O SER B 184 N LEU B 174 SHEET 1 BC 4 ILE B 195 PHE B 200 0 SHEET 2 BC 4 GLN B 207 SER B 212 -1 O PHE B 209 N LYS B 199 SHEET 3 BC 4 ALA B 216 ASP B 221 -1 O ALA B 216 N SER B 212 SHEET 4 BC 4 VAL B 226 ALA B 231 -1 N ILE B 227 O LEU B 219 SHEET 1 BD 4 TYR B 240 SER B 246 0 SHEET 2 BD 4 MET B 251 ASP B 256 -1 O MET B 251 N SER B 246 SHEET 3 BD 4 ARG B 260 GLY B 265 -1 O ARG B 260 N ASP B 256 SHEET 4 BD 4 GLU B 270 LYS B 275 -1 N ILE B 271 O LEU B 263 SHEET 1 BE 4 VAL B 281 ASN B 287 0 SHEET 2 BE 4 CYS B 290 SER B 298 -1 N CYS B 290 O ASN B 287 SHEET 3 BE 4 THR B 302 ASP B 307 -1 O THR B 302 N SER B 298 SHEET 4 BE 4 TYR B 317 PRO B 322 -1 N ILE B 318 O LEU B 305 SHEET 1 BF 4 VAL B 327 PHE B 332 0 SHEET 2 BF 4 LYS B 339 ASP B 344 -1 O LEU B 341 N TYR B 331 SHEET 3 BF 4 GLU B 348 SER B 353 -1 O GLU B 348 N ASP B 344 SHEET 4 BF 4 GLN B 362 ILE B 365 -1 O GLN B 362 N VAL B 351 SHEET 1 BG 4 THR B 380 TRP B 381 0 SHEET 2 BG 4 LEU B 387 GLY B 391 -1 O VAL B 389 N THR B 380 SHEET 3 BG 4 ILE B 406 ASP B 410 -1 O ASP B 407 N ALA B 390 SHEET 4 BG 4 LEU B 416 LEU B 420 -1 N VAL B 417 O ILE B 408 LINK O3' DA G 7 P TTD G 8 1555 1555 1.60 LINK O3' TTD G 8 P DA G 10 1555 1555 1.60 LINK OH TYR B 331 CA CA B1456 1555 1555 3.03 CISPEP 1 GLU A 224 PRO A 225 0 6.47 CISPEP 2 GLY A 357 PRO A 358 0 -10.83 SITE 1 AC1 1 TYR B 331 CRYST1 111.650 122.940 154.200 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008957 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008134 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006485 0.00000