PDB Short entry for 4ACR HEADER MEMBRANE PROTEIN 17-DEC-11 4ACR TITLE CRYSTAL STRUCTURE OF N-GLYCOSYLATED, C-TERMINALLY TRUNCATED HUMAN TITLE 2 GLYPICAN-1 CAVEAT 4ACR NAG B 500 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYPICAN-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 24-479; COMPND 5 SYNONYM: SECRETED GLYPICAN-1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: N-GLYCOSYLATED AT RESIDUES 79 AND 116 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCEP4 KEYWDS PROTEOGLYCAN, GLYCOSAMINOGLYCANS, HEPARAN SULFATE, HELICAL BUNDLE, KEYWDS 2 GLYCOPROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.SVENSSON,W.AWAD,K.MANI,D.T.LOGAN REVDAT 4 29-JUL-20 4ACR 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE REVDAT 3 17-JAN-18 4ACR 1 REMARK REVDAT 2 02-MAY-12 4ACR 1 JRNL REVDAT 1 22-FEB-12 4ACR 0 JRNL AUTH G.SVENSSON,W.AWAD,M.HAKANSSON,K.MANI,D.T.LOGAN JRNL TITL CRYSTAL STRUCTURE OF N-GLYCOSYLATED HUMAN GLYPICAN-1 CORE JRNL TITL 2 PROTEIN: STRUCTURE OF TWO LOOPS EVOLUTIONARILY CONSERVED IN JRNL TITL 3 VERTEBRATE GLYPICAN-1. JRNL REF J.BIOL.CHEM. V. 287 14040 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22351761 JRNL DOI 10.1074/JBC.M111.322487 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 74535 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7161 - 7.6083 0.98 2639 135 0.2146 0.1948 REMARK 3 2 7.6083 - 6.0557 1.00 2653 124 0.2560 0.3181 REMARK 3 3 6.0557 - 5.2951 1.00 2632 140 0.2506 0.3019 REMARK 3 4 5.2951 - 4.8132 1.00 2630 154 0.2174 0.2546 REMARK 3 5 4.8132 - 4.4694 1.00 2650 152 0.2015 0.2797 REMARK 3 6 4.4694 - 4.2067 1.00 2590 166 0.2216 0.2654 REMARK 3 7 4.2067 - 3.9965 1.00 2625 143 0.2308 0.2716 REMARK 3 8 3.9965 - 3.8229 1.00 2655 131 0.2402 0.3231 REMARK 3 9 3.8229 - 3.6760 1.00 2609 142 0.2565 0.2800 REMARK 3 10 3.6760 - 3.5494 1.00 2642 138 0.2525 0.2944 REMARK 3 11 3.5494 - 3.4386 1.00 2599 134 0.2561 0.2586 REMARK 3 12 3.4386 - 3.3404 1.00 2622 153 0.2574 0.3347 REMARK 3 13 3.3404 - 3.2526 1.00 2655 142 0.2715 0.3198 REMARK 3 14 3.2526 - 3.1733 1.00 2575 131 0.2702 0.3129 REMARK 3 15 3.1733 - 3.1013 1.00 2634 153 0.2703 0.2872 REMARK 3 16 3.1013 - 3.0353 1.00 2663 120 0.2767 0.2967 REMARK 3 17 3.0353 - 2.9747 1.00 2556 130 0.2707 0.3690 REMARK 3 18 2.9747 - 2.9186 1.00 2623 149 0.2648 0.3316 REMARK 3 19 2.9186 - 2.8665 1.00 2664 135 0.2564 0.2843 REMARK 3 20 2.8665 - 2.8180 1.00 2601 135 0.2853 0.3455 REMARK 3 21 2.8180 - 2.7725 0.99 2561 139 0.2958 0.3116 REMARK 3 22 2.7725 - 2.7299 1.00 2641 149 0.3136 0.3871 REMARK 3 23 2.7299 - 2.6898 1.00 2627 140 0.3136 0.3843 REMARK 3 24 2.6898 - 2.6519 1.00 2617 113 0.3386 0.4150 REMARK 3 25 2.6519 - 2.6161 1.00 2578 117 0.3278 0.3907 REMARK 3 26 2.6161 - 2.5822 0.99 2676 140 0.3244 0.3780 REMARK 3 27 2.5822 - 2.5499 0.99 2565 148 0.3397 0.3765 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 44.52 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.760 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.30600 REMARK 3 B22 (A**2) : -10.45540 REMARK 3 B33 (A**2) : 18.76150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.78590 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 12826 REMARK 3 ANGLE : 0.717 17309 REMARK 3 CHIRALITY : 0.053 1921 REMARK 3 PLANARITY : 0.003 2272 REMARK 3 DIHEDRAL : 13.643 4819 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 23.7654 3.4599 169.6083 REMARK 3 T TENSOR REMARK 3 T11: 0.1281 T22: 0.3112 REMARK 3 T33: 0.5310 T12: -0.0643 REMARK 3 T13: -0.0413 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 2.7487 L22: 2.5324 REMARK 3 L33: 1.2744 L12: 1.8070 REMARK 3 L13: -0.0430 L23: -0.0896 REMARK 3 S TENSOR REMARK 3 S11: 0.1656 S12: -0.2789 S13: -0.0209 REMARK 3 S21: 0.1993 S22: -0.1813 S23: -0.0834 REMARK 3 S31: 0.0193 S32: 0.0629 S33: 0.0144 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 15.6859 2.3202 138.6024 REMARK 3 T TENSOR REMARK 3 T11: -0.2143 T22: -0.0485 REMARK 3 T33: 0.2260 T12: 0.0875 REMARK 3 T13: 0.0290 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.3878 L22: 2.0482 REMARK 3 L33: 0.7949 L12: -0.5540 REMARK 3 L13: 0.3045 L23: -0.5381 REMARK 3 S TENSOR REMARK 3 S11: 0.0881 S12: -0.0347 S13: -0.1775 REMARK 3 S21: -0.0672 S22: -0.0959 S23: -0.1346 REMARK 3 S31: 0.1084 S32: 0.0486 S33: 0.0407 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 10.2888 4.0902 96.5238 REMARK 3 T TENSOR REMARK 3 T11: -0.1889 T22: 0.0612 REMARK 3 T33: 0.4124 T12: -0.0943 REMARK 3 T13: 0.0288 T23: -0.0882 REMARK 3 L TENSOR REMARK 3 L11: 2.7411 L22: 1.8560 REMARK 3 L33: 0.7405 L12: 1.6134 REMARK 3 L13: 0.4591 L23: 0.4586 REMARK 3 S TENSOR REMARK 3 S11: 0.0221 S12: -0.2079 S13: 0.0656 REMARK 3 S21: 0.0251 S22: -0.0906 S23: 0.0148 REMARK 3 S31: 0.0326 S32: -0.0568 S33: 0.0105 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): -1.7222 -0.7332 65.7536 REMARK 3 T TENSOR REMARK 3 T11: -0.0677 T22: -0.0741 REMARK 3 T33: 0.4141 T12: 0.1578 REMARK 3 T13: 0.0584 T23: 0.0932 REMARK 3 L TENSOR REMARK 3 L11: 2.1409 L22: 2.5523 REMARK 3 L33: 0.4135 L12: -1.4844 REMARK 3 L13: 0.0505 L23: -0.3343 REMARK 3 S TENSOR REMARK 3 S11: 0.2249 S12: 0.1499 S13: 0.0040 REMARK 3 S21: -0.2689 S22: -0.1673 S23: -0.1321 REMARK 3 S31: 0.0590 S32: 0.0037 S33: 0.0309 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ACR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1290050531. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0397 REMARK 200 MONOCHROMATOR : BENT SI(111) CRYSTAL REMARK 200 OPTICS : HORIZONTALLY FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79825 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.68000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: AUTO-RICKSHAW REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12-14% PEG 6000, 0.1 M TRIS-HCL, 0.2 M REMARK 280 CACL2, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 84.31500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 GLN A 4 REMARK 465 LEU A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 TYR A 14 REMARK 465 GLU A 15 REMARK 465 ASN A 16 REMARK 465 LEU A 17 REMARK 465 TYR A 18 REMARK 465 PHE A 19 REMARK 465 GLN A 20 REMARK 465 GLY A 21 REMARK 465 LYS A 22 REMARK 465 LEU A 23 REMARK 465 ASP A 24 REMARK 465 PRO A 25 REMARK 465 ALA A 26 REMARK 465 SER A 27 REMARK 465 LYS A 28 REMARK 465 GLU A 160 REMARK 465 GLU A 161 REMARK 465 THR A 162 REMARK 465 LEU A 163 REMARK 465 ALA A 164 REMARK 465 GLU A 165 REMARK 465 PHE A 175 REMARK 465 LYS A 176 REMARK 465 GLN A 177 REMARK 465 LEU A 178 REMARK 465 HIS A 179 REMARK 465 PRO A 180 REMARK 465 GLN A 181 REMARK 465 LEU A 182 REMARK 465 LEU A 183 REMARK 465 LEU A 184 REMARK 465 PRO A 185 REMARK 465 ASP A 186 REMARK 465 ASP A 187 REMARK 465 TYR A 188 REMARK 465 LEU A 189 REMARK 465 ASP A 190 REMARK 465 CYS A 191 REMARK 465 LEU A 192 REMARK 465 GLY A 193 REMARK 465 LYS A 194 REMARK 465 GLN A 195 REMARK 465 ALA A 196 REMARK 465 GLU A 197 REMARK 465 ALA A 198 REMARK 465 LEU A 199 REMARK 465 ARG A 200 REMARK 465 PRO A 201 REMARK 465 PHE A 202 REMARK 465 GLY A 203 REMARK 465 GLU A 204 REMARK 465 TRP A 320 REMARK 465 LEU A 321 REMARK 465 ALA A 322 REMARK 465 GLU A 323 REMARK 465 ALA A 324 REMARK 465 ILE A 325 REMARK 465 ASN A 326 REMARK 465 ALA A 327 REMARK 465 LEU A 328 REMARK 465 GLN A 329 REMARK 465 ASP A 330 REMARK 465 ASN A 331 REMARK 465 ARG A 332 REMARK 465 ASP A 333 REMARK 465 THR A 334 REMARK 465 LEU A 335 REMARK 465 THR A 336 REMARK 465 ALA A 337 REMARK 465 LYS A 338 REMARK 465 VAL A 339 REMARK 465 ILE A 340 REMARK 465 GLN A 341 REMARK 465 GLY A 342 REMARK 465 CYS A 343 REMARK 465 GLY A 344 REMARK 465 ASN A 345 REMARK 465 PRO A 346 REMARK 465 LYS A 347 REMARK 465 VAL A 348 REMARK 465 ASN A 349 REMARK 465 PRO A 350 REMARK 465 GLN A 351 REMARK 465 GLY A 352 REMARK 465 PRO A 353 REMARK 465 GLY A 354 REMARK 465 PRO A 355 REMARK 465 GLU A 356 REMARK 465 GLU A 357 REMARK 465 LYS A 358 REMARK 465 ARG A 359 REMARK 465 ARG A 360 REMARK 465 ARG A 361 REMARK 465 GLY A 362 REMARK 465 LYS A 363 REMARK 465 LEU A 364 REMARK 465 ALA A 365 REMARK 465 PRO A 366 REMARK 465 ARG A 367 REMARK 465 GLU A 368 REMARK 465 ARG A 369 REMARK 465 PRO A 370 REMARK 465 PRO A 371 REMARK 465 SER A 372 REMARK 465 LYS A 404 REMARK 465 MET A 405 REMARK 465 ALA A 406 REMARK 465 LEU A 407 REMARK 465 SER A 408 REMARK 465 THR A 409 REMARK 465 ALA A 410 REMARK 465 SER A 411 REMARK 465 ASP A 412 REMARK 465 ASP A 413 REMARK 465 ASP A 475 REMARK 465 VAL A 476 REMARK 465 ASP A 477 REMARK 465 PHE A 478 REMARK 465 GLN A 479 REMARK 465 ALA B 2 REMARK 465 PRO B 3 REMARK 465 GLN B 4 REMARK 465 LEU B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 ASP B 12 REMARK 465 LEU B 13 REMARK 465 TYR B 14 REMARK 465 GLU B 15 REMARK 465 ASN B 16 REMARK 465 LEU B 17 REMARK 465 TYR B 18 REMARK 465 PHE B 19 REMARK 465 GLN B 20 REMARK 465 GLY B 21 REMARK 465 LYS B 22 REMARK 465 LEU B 23 REMARK 465 ASP B 24 REMARK 465 PRO B 25 REMARK 465 ALA B 26 REMARK 465 SER B 27 REMARK 465 LYS B 28 REMARK 465 ASN B 349 REMARK 465 PRO B 350 REMARK 465 GLN B 351 REMARK 465 GLY B 352 REMARK 465 PRO B 353 REMARK 465 GLY B 354 REMARK 465 PRO B 355 REMARK 465 GLU B 356 REMARK 465 GLU B 357 REMARK 465 LYS B 358 REMARK 465 ARG B 359 REMARK 465 ARG B 360 REMARK 465 ARG B 361 REMARK 465 LYS B 404 REMARK 465 MET B 405 REMARK 465 ALA B 406 REMARK 465 LEU B 407 REMARK 465 SER B 408 REMARK 465 THR B 409 REMARK 465 ALA B 410 REMARK 465 SER B 411 REMARK 465 ASP B 412 REMARK 465 ASP B 413 REMARK 465 VAL B 476 REMARK 465 ASP B 477 REMARK 465 PHE B 478 REMARK 465 GLN B 479 REMARK 465 ALA C 2 REMARK 465 PRO C 3 REMARK 465 GLN C 4 REMARK 465 LEU C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 HIS C 11 REMARK 465 ASP C 12 REMARK 465 LEU C 13 REMARK 465 TYR C 14 REMARK 465 GLU C 15 REMARK 465 ASN C 16 REMARK 465 LEU C 17 REMARK 465 TYR C 18 REMARK 465 PHE C 19 REMARK 465 GLN C 20 REMARK 465 GLY C 21 REMARK 465 LYS C 22 REMARK 465 LEU C 23 REMARK 465 ASP C 24 REMARK 465 PRO C 25 REMARK 465 ALA C 26 REMARK 465 SER C 27 REMARK 465 LYS C 28 REMARK 465 GLN C 181 REMARK 465 LEU C 182 REMARK 465 LEU C 183 REMARK 465 LEU C 184 REMARK 465 PRO C 185 REMARK 465 ASP C 186 REMARK 465 ASP C 187 REMARK 465 TYR C 188 REMARK 465 LEU C 189 REMARK 465 ASP C 190 REMARK 465 CYS C 191 REMARK 465 LEU C 192 REMARK 465 GLY C 193 REMARK 465 LYS C 194 REMARK 465 GLN C 195 REMARK 465 ALA C 196 REMARK 465 ASN C 345 REMARK 465 PRO C 346 REMARK 465 LYS C 347 REMARK 465 VAL C 348 REMARK 465 ASN C 349 REMARK 465 PRO C 350 REMARK 465 GLN C 351 REMARK 465 GLY C 352 REMARK 465 PRO C 353 REMARK 465 GLY C 354 REMARK 465 PRO C 355 REMARK 465 GLU C 356 REMARK 465 GLU C 357 REMARK 465 LYS C 358 REMARK 465 ARG C 359 REMARK 465 ARG C 360 REMARK 465 ARG C 361 REMARK 465 GLY C 362 REMARK 465 LYS C 363 REMARK 465 LEU C 364 REMARK 465 ALA C 365 REMARK 465 PRO C 366 REMARK 465 ARG C 367 REMARK 465 GLU C 368 REMARK 465 ARG C 369 REMARK 465 PRO C 370 REMARK 465 PRO C 371 REMARK 465 LYS C 404 REMARK 465 MET C 405 REMARK 465 ALA C 406 REMARK 465 LEU C 407 REMARK 465 SER C 408 REMARK 465 THR C 409 REMARK 465 ALA C 410 REMARK 465 SER C 411 REMARK 465 ASP C 412 REMARK 465 ASP C 413 REMARK 465 ASP C 475 REMARK 465 VAL C 476 REMARK 465 ASP C 477 REMARK 465 PHE C 478 REMARK 465 GLN C 479 REMARK 465 ALA D 2 REMARK 465 PRO D 3 REMARK 465 GLN D 4 REMARK 465 LEU D 5 REMARK 465 HIS D 6 REMARK 465 HIS D 7 REMARK 465 HIS D 8 REMARK 465 HIS D 9 REMARK 465 HIS D 10 REMARK 465 HIS D 11 REMARK 465 ASP D 12 REMARK 465 LEU D 13 REMARK 465 TYR D 14 REMARK 465 GLU D 15 REMARK 465 ASN D 16 REMARK 465 LEU D 17 REMARK 465 TYR D 18 REMARK 465 PHE D 19 REMARK 465 GLN D 20 REMARK 465 GLY D 21 REMARK 465 LYS D 22 REMARK 465 LEU D 23 REMARK 465 ASP D 24 REMARK 465 PRO D 25 REMARK 465 ALA D 26 REMARK 465 SER D 27 REMARK 465 LYS D 28 REMARK 465 PRO D 350 REMARK 465 GLN D 351 REMARK 465 GLY D 352 REMARK 465 PRO D 353 REMARK 465 GLY D 354 REMARK 465 PRO D 355 REMARK 465 GLU D 356 REMARK 465 GLU D 357 REMARK 465 LYS D 358 REMARK 465 ARG D 359 REMARK 465 ARG D 360 REMARK 465 ARG D 361 REMARK 465 ALA D 406 REMARK 465 LEU D 407 REMARK 465 SER D 408 REMARK 465 THR D 409 REMARK 465 ALA D 410 REMARK 465 SER D 411 REMARK 465 ASP D 412 REMARK 465 VAL D 476 REMARK 465 ASP D 477 REMARK 465 PHE D 478 REMARK 465 GLN D 479 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS B 191 SG CYS B 343 2.05 REMARK 500 ND2 ASN C 116 C2 NAG C 501 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 185 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 254 -68.62 -93.15 REMARK 500 ALA A 420 178.03 179.23 REMARK 500 VAL B 254 -70.59 -91.86 REMARK 500 ASN B 345 74.96 51.97 REMARK 500 MET B 419 -62.82 -124.68 REMARK 500 ARG C 200 66.81 67.06 REMARK 500 VAL C 254 -70.83 -95.48 REMARK 500 VAL C 339 71.68 63.55 REMARK 500 ILE C 340 -145.61 51.25 REMARK 500 ARG D 60 -67.29 -95.10 REMARK 500 ASP D 186 -10.80 84.88 REMARK 500 ALA D 198 -17.16 74.03 REMARK 500 ARG D 200 70.98 47.38 REMARK 500 VAL D 254 -69.11 -98.45 REMARK 500 ASN D 345 77.18 53.39 REMARK 500 LYS D 404 -6.64 67.51 REMARK 500 MET D 419 -63.45 -109.28 REMARK 500 LYS D 448 74.39 -119.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 N-ACETYLGLUCOSAMINE (NAG): N-GLYCOSYLATION OF RESIDUES A116, REMARK 600 B79, B116, C116, D79 AND D116 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AD7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FULL-LENGTH N-GLYCOSYLATED HUMAN GLYPICAN-1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL HIS-TAG, C-TERMINAL HEPARAN SULFATE ATTACHMENT REMARK 999 AND GPI-ANCHOR REGIONS REMOVED DBREF 4ACR A 24 479 UNP P35052 GPC1_HUMAN 24 479 DBREF 4ACR B 24 479 UNP P35052 GPC1_HUMAN 24 479 DBREF 4ACR C 24 479 UNP P35052 GPC1_HUMAN 24 479 DBREF 4ACR D 24 479 UNP P35052 GPC1_HUMAN 24 479 SEQADV 4ACR ALA A 2 UNP P35052 EXPRESSION TAG SEQADV 4ACR PRO A 3 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN A 4 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU A 5 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS A 6 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS A 7 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS A 8 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS A 9 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS A 10 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS A 11 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASP A 12 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU A 13 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR A 14 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLU A 15 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASN A 16 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU A 17 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR A 18 UNP P35052 EXPRESSION TAG SEQADV 4ACR PHE A 19 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN A 20 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLY A 21 UNP P35052 EXPRESSION TAG SEQADV 4ACR LYS A 22 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU A 23 UNP P35052 EXPRESSION TAG SEQADV 4ACR ALA B 2 UNP P35052 EXPRESSION TAG SEQADV 4ACR PRO B 3 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN B 4 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU B 5 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS B 6 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS B 7 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS B 8 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS B 9 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS B 10 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS B 11 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASP B 12 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU B 13 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR B 14 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLU B 15 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASN B 16 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU B 17 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR B 18 UNP P35052 EXPRESSION TAG SEQADV 4ACR PHE B 19 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN B 20 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLY B 21 UNP P35052 EXPRESSION TAG SEQADV 4ACR LYS B 22 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU B 23 UNP P35052 EXPRESSION TAG SEQADV 4ACR ALA C 2 UNP P35052 EXPRESSION TAG SEQADV 4ACR PRO C 3 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN C 4 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU C 5 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS C 6 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS C 7 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS C 8 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS C 9 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS C 10 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS C 11 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASP C 12 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU C 13 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR C 14 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLU C 15 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASN C 16 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU C 17 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR C 18 UNP P35052 EXPRESSION TAG SEQADV 4ACR PHE C 19 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN C 20 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLY C 21 UNP P35052 EXPRESSION TAG SEQADV 4ACR LYS C 22 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU C 23 UNP P35052 EXPRESSION TAG SEQADV 4ACR ALA D 2 UNP P35052 EXPRESSION TAG SEQADV 4ACR PRO D 3 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN D 4 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU D 5 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS D 6 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS D 7 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS D 8 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS D 9 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS D 10 UNP P35052 EXPRESSION TAG SEQADV 4ACR HIS D 11 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASP D 12 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU D 13 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR D 14 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLU D 15 UNP P35052 EXPRESSION TAG SEQADV 4ACR ASN D 16 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU D 17 UNP P35052 EXPRESSION TAG SEQADV 4ACR TYR D 18 UNP P35052 EXPRESSION TAG SEQADV 4ACR PHE D 19 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLN D 20 UNP P35052 EXPRESSION TAG SEQADV 4ACR GLY D 21 UNP P35052 EXPRESSION TAG SEQADV 4ACR LYS D 22 UNP P35052 EXPRESSION TAG SEQADV 4ACR LEU D 23 UNP P35052 EXPRESSION TAG SEQRES 1 A 478 ALA PRO GLN LEU HIS HIS HIS HIS HIS HIS ASP LEU TYR SEQRES 2 A 478 GLU ASN LEU TYR PHE GLN GLY LYS LEU ASP PRO ALA SER SEQRES 3 A 478 LYS SER ARG SER CYS GLY GLU VAL ARG GLN ILE TYR GLY SEQRES 4 A 478 ALA LYS GLY PHE SER LEU SER ASP VAL PRO GLN ALA GLU SEQRES 5 A 478 ILE SER GLY GLU HIS LEU ARG ILE CYS PRO GLN GLY TYR SEQRES 6 A 478 THR CYS CYS THR SER GLU MET GLU GLU ASN LEU ALA ASN SEQRES 7 A 478 ARG SER HIS ALA GLU LEU GLU THR ALA LEU ARG ASP SER SEQRES 8 A 478 SER ARG VAL LEU GLN ALA MET LEU ALA THR GLN LEU ARG SEQRES 9 A 478 SER PHE ASP ASP HIS PHE GLN HIS LEU LEU ASN ASP SER SEQRES 10 A 478 GLU ARG THR LEU GLN ALA THR PHE PRO GLY ALA PHE GLY SEQRES 11 A 478 GLU LEU TYR THR GLN ASN ALA ARG ALA PHE ARG ASP LEU SEQRES 12 A 478 TYR SER GLU LEU ARG LEU TYR TYR ARG GLY ALA ASN LEU SEQRES 13 A 478 HIS LEU GLU GLU THR LEU ALA GLU PHE TRP ALA ARG LEU SEQRES 14 A 478 LEU GLU ARG LEU PHE LYS GLN LEU HIS PRO GLN LEU LEU SEQRES 15 A 478 LEU PRO ASP ASP TYR LEU ASP CYS LEU GLY LYS GLN ALA SEQRES 16 A 478 GLU ALA LEU ARG PRO PHE GLY GLU ALA PRO ARG GLU LEU SEQRES 17 A 478 ARG LEU ARG ALA THR ARG ALA PHE VAL ALA ALA ARG SER SEQRES 18 A 478 PHE VAL GLN GLY LEU GLY VAL ALA SER ASP VAL VAL ARG SEQRES 19 A 478 LYS VAL ALA GLN VAL PRO LEU GLY PRO GLU CYS SER ARG SEQRES 20 A 478 ALA VAL MET LYS LEU VAL TYR CYS ALA HIS CYS LEU GLY SEQRES 21 A 478 VAL PRO GLY ALA ARG PRO CYS PRO ASP TYR CYS ARG ASN SEQRES 22 A 478 VAL LEU LYS GLY CYS LEU ALA ASN GLN ALA ASP LEU ASP SEQRES 23 A 478 ALA GLU TRP ARG ASN LEU LEU ASP SER MET VAL LEU ILE SEQRES 24 A 478 THR ASP LYS PHE TRP GLY THR SER GLY VAL GLU SER VAL SEQRES 25 A 478 ILE GLY SER VAL HIS THR TRP LEU ALA GLU ALA ILE ASN SEQRES 26 A 478 ALA LEU GLN ASP ASN ARG ASP THR LEU THR ALA LYS VAL SEQRES 27 A 478 ILE GLN GLY CYS GLY ASN PRO LYS VAL ASN PRO GLN GLY SEQRES 28 A 478 PRO GLY PRO GLU GLU LYS ARG ARG ARG GLY LYS LEU ALA SEQRES 29 A 478 PRO ARG GLU ARG PRO PRO SER GLY THR LEU GLU LYS LEU SEQRES 30 A 478 VAL SER GLU ALA LYS ALA GLN LEU ARG ASP VAL GLN ASP SEQRES 31 A 478 PHE TRP ILE SER LEU PRO GLY THR LEU CYS SER GLU LYS SEQRES 32 A 478 MET ALA LEU SER THR ALA SER ASP ASP ARG CYS TRP ASN SEQRES 33 A 478 GLY MET ALA ARG GLY ARG TYR LEU PRO GLU VAL MET GLY SEQRES 34 A 478 ASP GLY LEU ALA ASN GLN ILE ASN ASN PRO GLU VAL GLU SEQRES 35 A 478 VAL ASP ILE THR LYS PRO ASP MET THR ILE ARG GLN GLN SEQRES 36 A 478 ILE MET GLN LEU LYS ILE MET THR ASN ARG LEU ARG SER SEQRES 37 A 478 ALA TYR ASN GLY ASN ASP VAL ASP PHE GLN SEQRES 1 B 478 ALA PRO GLN LEU HIS HIS HIS HIS HIS HIS ASP LEU TYR SEQRES 2 B 478 GLU ASN LEU TYR PHE GLN GLY LYS LEU ASP PRO ALA SER SEQRES 3 B 478 LYS SER ARG SER CYS GLY GLU VAL ARG GLN ILE TYR GLY SEQRES 4 B 478 ALA LYS GLY PHE SER LEU SER ASP VAL PRO GLN ALA GLU SEQRES 5 B 478 ILE SER GLY GLU HIS LEU ARG ILE CYS PRO GLN GLY TYR SEQRES 6 B 478 THR CYS CYS THR SER GLU MET GLU GLU ASN LEU ALA ASN SEQRES 7 B 478 ARG SER HIS ALA GLU LEU GLU THR ALA LEU ARG ASP SER SEQRES 8 B 478 SER ARG VAL LEU GLN ALA MET LEU ALA THR GLN LEU ARG SEQRES 9 B 478 SER PHE ASP ASP HIS PHE GLN HIS LEU LEU ASN ASP SER SEQRES 10 B 478 GLU ARG THR LEU GLN ALA THR PHE PRO GLY ALA PHE GLY SEQRES 11 B 478 GLU LEU TYR THR GLN ASN ALA ARG ALA PHE ARG ASP LEU SEQRES 12 B 478 TYR SER GLU LEU ARG LEU TYR TYR ARG GLY ALA ASN LEU SEQRES 13 B 478 HIS LEU GLU GLU THR LEU ALA GLU PHE TRP ALA ARG LEU SEQRES 14 B 478 LEU GLU ARG LEU PHE LYS GLN LEU HIS PRO GLN LEU LEU SEQRES 15 B 478 LEU PRO ASP ASP TYR LEU ASP CYS LEU GLY LYS GLN ALA SEQRES 16 B 478 GLU ALA LEU ARG PRO PHE GLY GLU ALA PRO ARG GLU LEU SEQRES 17 B 478 ARG LEU ARG ALA THR ARG ALA PHE VAL ALA ALA ARG SER SEQRES 18 B 478 PHE VAL GLN GLY LEU GLY VAL ALA SER ASP VAL VAL ARG SEQRES 19 B 478 LYS VAL ALA GLN VAL PRO LEU GLY PRO GLU CYS SER ARG SEQRES 20 B 478 ALA VAL MET LYS LEU VAL TYR CYS ALA HIS CYS LEU GLY SEQRES 21 B 478 VAL PRO GLY ALA ARG PRO CYS PRO ASP TYR CYS ARG ASN SEQRES 22 B 478 VAL LEU LYS GLY CYS LEU ALA ASN GLN ALA ASP LEU ASP SEQRES 23 B 478 ALA GLU TRP ARG ASN LEU LEU ASP SER MET VAL LEU ILE SEQRES 24 B 478 THR ASP LYS PHE TRP GLY THR SER GLY VAL GLU SER VAL SEQRES 25 B 478 ILE GLY SER VAL HIS THR TRP LEU ALA GLU ALA ILE ASN SEQRES 26 B 478 ALA LEU GLN ASP ASN ARG ASP THR LEU THR ALA LYS VAL SEQRES 27 B 478 ILE GLN GLY CYS GLY ASN PRO LYS VAL ASN PRO GLN GLY SEQRES 28 B 478 PRO GLY PRO GLU GLU LYS ARG ARG ARG GLY LYS LEU ALA SEQRES 29 B 478 PRO ARG GLU ARG PRO PRO SER GLY THR LEU GLU LYS LEU SEQRES 30 B 478 VAL SER GLU ALA LYS ALA GLN LEU ARG ASP VAL GLN ASP SEQRES 31 B 478 PHE TRP ILE SER LEU PRO GLY THR LEU CYS SER GLU LYS SEQRES 32 B 478 MET ALA LEU SER THR ALA SER ASP ASP ARG CYS TRP ASN SEQRES 33 B 478 GLY MET ALA ARG GLY ARG TYR LEU PRO GLU VAL MET GLY SEQRES 34 B 478 ASP GLY LEU ALA ASN GLN ILE ASN ASN PRO GLU VAL GLU SEQRES 35 B 478 VAL ASP ILE THR LYS PRO ASP MET THR ILE ARG GLN GLN SEQRES 36 B 478 ILE MET GLN LEU LYS ILE MET THR ASN ARG LEU ARG SER SEQRES 37 B 478 ALA TYR ASN GLY ASN ASP VAL ASP PHE GLN SEQRES 1 C 478 ALA PRO GLN LEU HIS HIS HIS HIS HIS HIS ASP LEU TYR SEQRES 2 C 478 GLU ASN LEU TYR PHE GLN GLY LYS LEU ASP PRO ALA SER SEQRES 3 C 478 LYS SER ARG SER CYS GLY GLU VAL ARG GLN ILE TYR GLY SEQRES 4 C 478 ALA LYS GLY PHE SER LEU SER ASP VAL PRO GLN ALA GLU SEQRES 5 C 478 ILE SER GLY GLU HIS LEU ARG ILE CYS PRO GLN GLY TYR SEQRES 6 C 478 THR CYS CYS THR SER GLU MET GLU GLU ASN LEU ALA ASN SEQRES 7 C 478 ARG SER HIS ALA GLU LEU GLU THR ALA LEU ARG ASP SER SEQRES 8 C 478 SER ARG VAL LEU GLN ALA MET LEU ALA THR GLN LEU ARG SEQRES 9 C 478 SER PHE ASP ASP HIS PHE GLN HIS LEU LEU ASN ASP SER SEQRES 10 C 478 GLU ARG THR LEU GLN ALA THR PHE PRO GLY ALA PHE GLY SEQRES 11 C 478 GLU LEU TYR THR GLN ASN ALA ARG ALA PHE ARG ASP LEU SEQRES 12 C 478 TYR SER GLU LEU ARG LEU TYR TYR ARG GLY ALA ASN LEU SEQRES 13 C 478 HIS LEU GLU GLU THR LEU ALA GLU PHE TRP ALA ARG LEU SEQRES 14 C 478 LEU GLU ARG LEU PHE LYS GLN LEU HIS PRO GLN LEU LEU SEQRES 15 C 478 LEU PRO ASP ASP TYR LEU ASP CYS LEU GLY LYS GLN ALA SEQRES 16 C 478 GLU ALA LEU ARG PRO PHE GLY GLU ALA PRO ARG GLU LEU SEQRES 17 C 478 ARG LEU ARG ALA THR ARG ALA PHE VAL ALA ALA ARG SER SEQRES 18 C 478 PHE VAL GLN GLY LEU GLY VAL ALA SER ASP VAL VAL ARG SEQRES 19 C 478 LYS VAL ALA GLN VAL PRO LEU GLY PRO GLU CYS SER ARG SEQRES 20 C 478 ALA VAL MET LYS LEU VAL TYR CYS ALA HIS CYS LEU GLY SEQRES 21 C 478 VAL PRO GLY ALA ARG PRO CYS PRO ASP TYR CYS ARG ASN SEQRES 22 C 478 VAL LEU LYS GLY CYS LEU ALA ASN GLN ALA ASP LEU ASP SEQRES 23 C 478 ALA GLU TRP ARG ASN LEU LEU ASP SER MET VAL LEU ILE SEQRES 24 C 478 THR ASP LYS PHE TRP GLY THR SER GLY VAL GLU SER VAL SEQRES 25 C 478 ILE GLY SER VAL HIS THR TRP LEU ALA GLU ALA ILE ASN SEQRES 26 C 478 ALA LEU GLN ASP ASN ARG ASP THR LEU THR ALA LYS VAL SEQRES 27 C 478 ILE GLN GLY CYS GLY ASN PRO LYS VAL ASN PRO GLN GLY SEQRES 28 C 478 PRO GLY PRO GLU GLU LYS ARG ARG ARG GLY LYS LEU ALA SEQRES 29 C 478 PRO ARG GLU ARG PRO PRO SER GLY THR LEU GLU LYS LEU SEQRES 30 C 478 VAL SER GLU ALA LYS ALA GLN LEU ARG ASP VAL GLN ASP SEQRES 31 C 478 PHE TRP ILE SER LEU PRO GLY THR LEU CYS SER GLU LYS SEQRES 32 C 478 MET ALA LEU SER THR ALA SER ASP ASP ARG CYS TRP ASN SEQRES 33 C 478 GLY MET ALA ARG GLY ARG TYR LEU PRO GLU VAL MET GLY SEQRES 34 C 478 ASP GLY LEU ALA ASN GLN ILE ASN ASN PRO GLU VAL GLU SEQRES 35 C 478 VAL ASP ILE THR LYS PRO ASP MET THR ILE ARG GLN GLN SEQRES 36 C 478 ILE MET GLN LEU LYS ILE MET THR ASN ARG LEU ARG SER SEQRES 37 C 478 ALA TYR ASN GLY ASN ASP VAL ASP PHE GLN SEQRES 1 D 478 ALA PRO GLN LEU HIS HIS HIS HIS HIS HIS ASP LEU TYR SEQRES 2 D 478 GLU ASN LEU TYR PHE GLN GLY LYS LEU ASP PRO ALA SER SEQRES 3 D 478 LYS SER ARG SER CYS GLY GLU VAL ARG GLN ILE TYR GLY SEQRES 4 D 478 ALA LYS GLY PHE SER LEU SER ASP VAL PRO GLN ALA GLU SEQRES 5 D 478 ILE SER GLY GLU HIS LEU ARG ILE CYS PRO GLN GLY TYR SEQRES 6 D 478 THR CYS CYS THR SER GLU MET GLU GLU ASN LEU ALA ASN SEQRES 7 D 478 ARG SER HIS ALA GLU LEU GLU THR ALA LEU ARG ASP SER SEQRES 8 D 478 SER ARG VAL LEU GLN ALA MET LEU ALA THR GLN LEU ARG SEQRES 9 D 478 SER PHE ASP ASP HIS PHE GLN HIS LEU LEU ASN ASP SER SEQRES 10 D 478 GLU ARG THR LEU GLN ALA THR PHE PRO GLY ALA PHE GLY SEQRES 11 D 478 GLU LEU TYR THR GLN ASN ALA ARG ALA PHE ARG ASP LEU SEQRES 12 D 478 TYR SER GLU LEU ARG LEU TYR TYR ARG GLY ALA ASN LEU SEQRES 13 D 478 HIS LEU GLU GLU THR LEU ALA GLU PHE TRP ALA ARG LEU SEQRES 14 D 478 LEU GLU ARG LEU PHE LYS GLN LEU HIS PRO GLN LEU LEU SEQRES 15 D 478 LEU PRO ASP ASP TYR LEU ASP CYS LEU GLY LYS GLN ALA SEQRES 16 D 478 GLU ALA LEU ARG PRO PHE GLY GLU ALA PRO ARG GLU LEU SEQRES 17 D 478 ARG LEU ARG ALA THR ARG ALA PHE VAL ALA ALA ARG SER SEQRES 18 D 478 PHE VAL GLN GLY LEU GLY VAL ALA SER ASP VAL VAL ARG SEQRES 19 D 478 LYS VAL ALA GLN VAL PRO LEU GLY PRO GLU CYS SER ARG SEQRES 20 D 478 ALA VAL MET LYS LEU VAL TYR CYS ALA HIS CYS LEU GLY SEQRES 21 D 478 VAL PRO GLY ALA ARG PRO CYS PRO ASP TYR CYS ARG ASN SEQRES 22 D 478 VAL LEU LYS GLY CYS LEU ALA ASN GLN ALA ASP LEU ASP SEQRES 23 D 478 ALA GLU TRP ARG ASN LEU LEU ASP SER MET VAL LEU ILE SEQRES 24 D 478 THR ASP LYS PHE TRP GLY THR SER GLY VAL GLU SER VAL SEQRES 25 D 478 ILE GLY SER VAL HIS THR TRP LEU ALA GLU ALA ILE ASN SEQRES 26 D 478 ALA LEU GLN ASP ASN ARG ASP THR LEU THR ALA LYS VAL SEQRES 27 D 478 ILE GLN GLY CYS GLY ASN PRO LYS VAL ASN PRO GLN GLY SEQRES 28 D 478 PRO GLY PRO GLU GLU LYS ARG ARG ARG GLY LYS LEU ALA SEQRES 29 D 478 PRO ARG GLU ARG PRO PRO SER GLY THR LEU GLU LYS LEU SEQRES 30 D 478 VAL SER GLU ALA LYS ALA GLN LEU ARG ASP VAL GLN ASP SEQRES 31 D 478 PHE TRP ILE SER LEU PRO GLY THR LEU CYS SER GLU LYS SEQRES 32 D 478 MET ALA LEU SER THR ALA SER ASP ASP ARG CYS TRP ASN SEQRES 33 D 478 GLY MET ALA ARG GLY ARG TYR LEU PRO GLU VAL MET GLY SEQRES 34 D 478 ASP GLY LEU ALA ASN GLN ILE ASN ASN PRO GLU VAL GLU SEQRES 35 D 478 VAL ASP ILE THR LYS PRO ASP MET THR ILE ARG GLN GLN SEQRES 36 D 478 ILE MET GLN LEU LYS ILE MET THR ASN ARG LEU ARG SER SEQRES 37 D 478 ALA TYR ASN GLY ASN ASP VAL ASP PHE GLN MODRES 4ACR ASN A 116 ASN GLYCOSYLATION SITE MODRES 4ACR ASN B 79 ASN GLYCOSYLATION SITE MODRES 4ACR ASN B 116 ASN GLYCOSYLATION SITE MODRES 4ACR ASN C 116 ASN GLYCOSYLATION SITE MODRES 4ACR ASN D 79 ASN GLYCOSYLATION SITE MODRES 4ACR ASN D 116 ASN GLYCOSYLATION SITE HET NAG A 501 14 HET NAG B 500 14 HET NAG B 501 14 HET NAG C 501 14 HET NAG D 500 14 HET NAG D 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 5 NAG 6(C8 H15 N O6) FORMUL 11 HOH *242(H2 O) HELIX 1 1 CYS A 32 ALA A 41 1 10 HELIX 2 2 THR A 70 PHE A 126 1 57 HELIX 3 3 GLY A 131 ARG A 153 1 23 HELIX 4 4 PHE A 166 LEU A 174 1 9 HELIX 5 5 ALA A 205 ALA A 238 1 34 HELIX 6 6 GLY A 243 VAL A 254 1 12 HELIX 7 7 TYR A 255 LEU A 260 1 6 HELIX 8 8 CYS A 268 ASP A 285 1 18 HELIX 9 9 LEU A 286 ILE A 300 1 15 HELIX 10 10 THR A 301 TRP A 305 5 5 HELIX 11 11 GLY A 309 SER A 316 1 8 HELIX 12 12 GLY A 373 VAL A 389 1 17 HELIX 13 13 ASP A 391 GLU A 403 1 13 HELIX 14 14 LEU A 433 ILE A 437 5 5 HELIX 15 15 ASP A 450 ASN A 472 1 23 HELIX 16 16 CYS B 32 LYS B 42 1 11 HELIX 17 17 SER B 45 VAL B 49 5 5 HELIX 18 18 THR B 70 PHE B 130 1 61 HELIX 19 19 GLY B 131 GLN B 136 1 6 HELIX 20 20 ASN B 137 ARG B 153 1 17 HELIX 21 21 LEU B 159 HIS B 179 1 21 HELIX 22 22 ASP B 187 ARG B 200 1 14 HELIX 23 23 GLU B 204 ALA B 238 1 35 HELIX 24 24 GLY B 243 VAL B 254 1 12 HELIX 25 25 TYR B 255 LEU B 260 1 6 HELIX 26 26 CYS B 268 LEU B 280 1 13 HELIX 27 27 LEU B 280 ASP B 285 1 6 HELIX 28 28 LEU B 286 ILE B 300 1 15 HELIX 29 29 THR B 301 TRP B 305 5 5 HELIX 30 30 GLY B 309 CYS B 343 1 35 HELIX 31 31 GLY B 373 VAL B 389 1 17 HELIX 32 32 ASP B 391 GLU B 403 1 13 HELIX 33 33 LEU B 433 ILE B 437 5 5 HELIX 34 34 ASP B 450 ASN B 472 1 23 HELIX 35 35 CYS C 32 GLY C 43 1 12 HELIX 36 36 THR C 70 GLN C 136 1 67 HELIX 37 37 ASN C 137 ARG C 153 1 17 HELIX 38 38 HIS C 158 HIS C 179 1 22 HELIX 39 39 GLU C 204 GLN C 239 1 36 HELIX 40 40 GLY C 243 TYR C 255 1 13 HELIX 41 41 TYR C 255 LEU C 260 1 6 HELIX 42 42 CYS C 268 LEU C 280 1 13 HELIX 43 43 LEU C 280 ASP C 285 1 6 HELIX 44 44 LEU C 286 THR C 301 1 16 HELIX 45 45 ASP C 302 TRP C 305 5 4 HELIX 46 46 SER C 312 ASN C 331 1 20 HELIX 47 47 THR C 334 LYS C 338 5 5 HELIX 48 48 GLY C 373 GLN C 390 1 18 HELIX 49 49 ASP C 391 GLU C 403 1 13 HELIX 50 50 LEU C 433 ILE C 437 5 5 HELIX 51 51 ASP C 450 GLY C 473 1 24 HELIX 52 52 CYS D 32 LYS D 42 1 11 HELIX 53 53 THR D 70 PHE D 130 1 61 HELIX 54 54 GLY D 131 GLN D 136 1 6 HELIX 55 55 ASN D 137 GLY D 154 1 18 HELIX 56 56 HIS D 158 HIS D 179 1 22 HELIX 57 57 ASP D 186 GLN D 195 1 10 HELIX 58 58 GLN D 195 ARG D 200 1 6 HELIX 59 59 GLU D 204 ALA D 238 1 35 HELIX 60 60 GLY D 243 TYR D 255 1 13 HELIX 61 61 TYR D 255 LEU D 260 1 6 HELIX 62 62 CYS D 268 LEU D 280 1 13 HELIX 63 63 LEU D 280 ASP D 285 1 6 HELIX 64 64 LEU D 286 THR D 301 1 16 HELIX 65 65 ASP D 302 PHE D 304 5 3 HELIX 66 66 GLY D 309 GLY D 344 1 36 HELIX 67 67 GLY D 373 VAL D 389 1 17 HELIX 68 68 ASP D 391 GLU D 403 1 13 HELIX 69 69 LEU D 433 ILE D 437 5 5 HELIX 70 70 ASP D 450 ASN D 472 1 23 SHEET 1 AA 2 CYS A 415 TRP A 416 0 SHEET 2 AA 2 ARG A 421 GLY A 422 -1 O GLY A 422 N CYS A 415 SHEET 1 CA 2 CYS C 415 TRP C 416 0 SHEET 2 CA 2 ARG C 421 GLY C 422 -1 O GLY C 422 N CYS C 415 SHEET 1 DA 2 CYS D 415 TRP D 416 0 SHEET 2 DA 2 ARG D 421 GLY D 422 -1 O GLY D 422 N CYS D 415 SSBOND 1 CYS A 32 CYS A 68 1555 1555 2.03 SSBOND 2 CYS A 62 CYS A 256 1555 1555 2.02 SSBOND 3 CYS A 69 CYS A 259 1555 1555 2.03 SSBOND 4 CYS A 246 CYS A 279 1555 1555 2.03 SSBOND 5 CYS A 268 CYS A 415 1555 1555 2.03 SSBOND 6 CYS A 272 CYS A 401 1555 1555 2.03 SSBOND 7 CYS B 32 CYS B 68 1555 1555 2.03 SSBOND 8 CYS B 62 CYS B 256 1555 1555 2.03 SSBOND 9 CYS B 69 CYS B 259 1555 1555 2.03 SSBOND 10 CYS B 191 CYS B 343 1555 1555 2.03 SSBOND 11 CYS B 246 CYS B 279 1555 1555 2.03 SSBOND 12 CYS B 268 CYS B 415 1555 1555 2.03 SSBOND 13 CYS B 272 CYS B 401 1555 1555 2.03 SSBOND 14 CYS C 32 CYS C 68 1555 1555 2.03 SSBOND 15 CYS C 62 CYS C 256 1555 1555 2.03 SSBOND 16 CYS C 69 CYS C 259 1555 1555 2.03 SSBOND 17 CYS C 246 CYS C 279 1555 1555 2.03 SSBOND 18 CYS C 268 CYS C 415 1555 1555 2.03 SSBOND 19 CYS C 272 CYS C 401 1555 1555 2.03 SSBOND 20 CYS D 32 CYS D 68 1555 1555 2.03 SSBOND 21 CYS D 62 CYS D 256 1555 1555 2.03 SSBOND 22 CYS D 69 CYS D 259 1555 1555 2.03 SSBOND 23 CYS D 191 CYS D 343 1555 1555 2.03 SSBOND 24 CYS D 246 CYS D 279 1555 1555 2.03 SSBOND 25 CYS D 268 CYS D 415 1555 1555 2.03 SSBOND 26 CYS D 272 CYS D 401 1555 1555 2.03 LINK ND2 ASN A 116 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN B 79 C1 NAG B 500 1555 1555 1.44 LINK ND2 ASN B 116 C1 NAG B 501 1555 1555 1.44 LINK ND2 ASN C 116 C1 NAG C 501 1555 1555 1.44 LINK ND2 ASN D 79 C1 NAG D 500 1555 1555 1.44 LINK ND2 ASN D 116 C1 NAG D 501 1555 1555 1.44 CRYST1 47.170 168.630 147.760 90.00 94.59 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021200 0.000000 0.001702 0.00000 SCALE2 0.000000 0.005930 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006790 0.00000 MTRIX1 1 0.999800 -0.007582 -0.017650 15.71000 1 MTRIX2 1 -0.002682 -0.964900 0.262600 -23.50000 1 MTRIX3 1 -0.019020 -0.262500 -0.964800 304.10000 1 MTRIX1 2 0.999700 0.022670 0.010040 13.56000 1 MTRIX2 2 -0.022860 0.999600 0.018980 11.75000 1 MTRIX3 2 -0.009609 -0.019200 0.999800 -71.23000 1 MTRIX1 3 0.997800 -0.060510 -0.026490 33.19000 1 MTRIX2 3 -0.050920 -0.960100 0.275100 -10.92000 1 MTRIX3 3 -0.042080 -0.273100 -0.961100 232.40000 1